RNA–Protein interactions for RNA: ENST00000540021.5

MSH6-210, Transcript of mutS homolog 6, humanhuman

TSL 2 BASIC

Gene MSH6, Length 3,930 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-210ENST00000540021 OR52W1Q6IF63 320 aa11.79□□□□□ -0.52
MSH6-210ENST00000540021 RASGRP3Q8IV61 690 aa11.79□□□□□ -0.52
MSH6-210ENST00000540021 TMEM52Q8NDY8 209 aa11.79□□□□□ -0.52
MSH6-210ENST00000540021 ST6GALNAC5Q9BVH7 336 aa11.79□□□□□ -0.52
MSH6-210ENST00000540021 KIR3DX1Q9H7L2 352 aa11.79□□□□□ -0.52
MSH6-210ENST00000540021 FANCFQ9NPI8 374 aa11.79□□□□□ -0.52
MSH6-210ENST00000540021 BIN3Q9NQY0 253 aa11.79□□□□□ -0.52
MSH6-210ENST00000540021 MTFP1Q9UDX5 166 aa11.79□□□□□ -0.52
MSH6-210ENST00000540021 CABIN1Q9Y6J0 2220 aa11.79□□□□□ -0.52
MSH6-210ENST00000540021 ITGA5P08648 1049 aa11.79□□□□□ -0.52
MSH6-210ENST00000540021 HTRA4P83105 476 aaPredicted RBP11.79□□□□□ -0.52
MSH6-210ENST00000540021 ELFN2Q5R3F8 820 aa11.79□□□□□ -0.52
MSH6-210ENST00000540021 OR1S2Q8NGQ3 325 aa11.79□□□□□ -0.52
MSH6-210ENST00000540021 ZNF587Q96SQ5 575 aaPredicted RBP11.79□□□□□ -0.52
MSH6-210ENST00000540021 STACQ99469 402 aa11.79□□□□□ -0.52
MSH6-210ENST00000540021 EIF5A2Q9GZV4 153 aaKnown RBP11.79□□□□□ -0.52
MSH6-210ENST00000540021 TMEM269A0A1B0GVZ9 245 aa11.79□□□□□ -0.52
MSH6-210ENST00000540021 MFSD2BA6NFX1 497 aa11.79□□□□□ -0.52
MSH6-210ENST00000540021 TUBAL3A6NHL2 446 aa11.79□□□□□ -0.52
MSH6-210ENST00000540021 HRKO00198 91 aa11.79□□□□□ -0.52
MSH6-210ENST00000540021 CNR1P21554 472 aa11.79□□□□□ -0.52
MSH6-210ENST00000540021 DRD3P35462 400 aa11.79□□□□□ -0.52
MSH6-210ENST00000540021 SLC6A9P48067 706 aa11.79□□□□□ -0.52
MSH6-210ENST00000540021 ATP1B3P54709 279 aa11.79□□□□□ -0.52
MSH6-210ENST00000540021 RPL18Q07020 188 aaKnown RBP11.79□□□□□ -0.52
MSH6-210ENST00000540021 PLA2G7Q13093 441 aa11.79□□□□□ -0.52
MSH6-210ENST00000540021 PDZK1IP1Q13113 114 aa11.79□□□□□ -0.52
MSH6-210ENST00000540021 CARD17Q5XLA6 110 aa11.79□□□□□ -0.52
MSH6-210ENST00000540021 RGS7BPQ6MZT1 257 aaPredicted RBP11.79□□□□□ -0.52
MSH6-210ENST00000540021 OR2W3Q7Z3T1 314 aa11.79□□□□□ -0.52
MSH6-210ENST00000540021 SHISA5Q8N114 240 aa11.79□□□□□ -0.52
MSH6-210ENST00000540021 OR5M9Q8NGP3 310 aa11.79□□□□□ -0.52
MSH6-210ENST00000540021 OR13C9Q8NGT0 318 aa11.79□□□□□ -0.52
MSH6-210ENST00000540021 RSPRY1Q96DX4 576 aa11.79□□□□□ -0.52
MSH6-210ENST00000540021 ZNF223Q9UK11 482 aaPredicted RBP11.79□□□□□ -0.52
MSH6-210ENST00000540021 P2RY10O00398 339 aa11.78□□□□□ -0.52
MSH6-210ENST00000540021 MOSPD3O75425 235 aa11.78□□□□□ -0.52
MSH6-210ENST00000540021 AKT2P31751 481 aa11.78□□□□□ -0.52
MSH6-210ENST00000540021 NR0B1P51843 470 aaKnown RBP11.78□□□□□ -0.52
MSH6-210ENST00000540021 FLI1Q01543 452 aaPredicted RBP11.78□□□□□ -0.52
MSH6-210ENST00000540021 WBP2NLQ6ICG8 309 aa11.78□□□□□ -0.52
MSH6-210ENST00000540021 PAPD4Q6PIY7 484 aaKnown RBP11.78□□□□□ -0.52
MSH6-210ENST00000540021 SHISA6Q6ZSJ9 500 aa11.78□□□□□ -0.52
MSH6-210ENST00000540021 RAB11FIP2Q7L804 512 aa11.78□□□□□ -0.52
MSH6-210ENST00000540021 SLC29A4Q7RTT9 530 aa11.78□□□□□ -0.52
MSH6-210ENST00000540021 ZNRF4Q8WWF5 429 aa11.78□□□□□ -0.52
MSH6-210ENST00000540021 CMBLQ96DG6 245 aa11.78□□□□□ -0.52
MSH6-210ENST00000540021 MOGAT1Q96PD6 335 aa11.78□□□□□ -0.52
MSH6-210ENST00000540021 MTIF3Q9H2K0 278 aaKnown RBP11.78□□□□□ -0.52
MSH6-210ENST00000540021 FRRS1LQ9P0K9 344 aa11.78□□□□□ -0.52
MSH6-210ENST00000540021 HHLA2Q9UM44 414 aa11.78□□□□□ -0.52
MSH6-210ENST00000540021 MAP1BP46821 2468 aaKnown RBP11.78□□□□□ -0.52
MSH6-210ENST00000540021 CTAG2O75638 210 aa11.78□□□□□ -0.52
MSH6-210ENST00000540021 STK17BO94768 372 aa11.78□□□□□ -0.52
MSH6-210ENST00000540021 SERPINA5P05154 406 aa11.78□□□□□ -0.52
MSH6-210ENST00000540021 NGFRP08138 427 aa11.78□□□□□ -0.52
MSH6-210ENST00000540021 SNRNP70P08621 437 aaKnown RBP11.78□□□□□ -0.52
MSH6-210ENST00000540021 MGMTP16455 207 aa11.78□□□□□ -0.52
MSH6-210ENST00000540021 DPP4P27487 766 aa11.78□□□□□ -0.52
MSH6-210ENST00000540021 PEBP1P30086 187 aaKnown RBP11.78□□□□□ -0.52
MSH6-210ENST00000540021 PPT1P50897 306 aa11.78□□□□□ -0.52
MSH6-210ENST00000540021 HTRA3P83110 453 aa11.78□□□□□ -0.52
MSH6-210ENST00000540021 HHEXQ03014 270 aa11.78□□□□□ -0.52
MSH6-210ENST00000540021 GPM6BQ13491 265 aa11.78□□□□□ -0.52
MSH6-210ENST00000540021 FAM53BQ14153 422 aa11.78□□□□□ -0.52
MSH6-210ENST00000540021 CCDC74AQ96AQ1 378 aa11.78□□□□□ -0.52
MSH6-210ENST00000540021 ZNF707Q96C28 371 aaPredicted RBP11.78□□□□□ -0.52
MSH6-210ENST00000540021 NPAS1Q99742 590 aa11.78□□□□□ -0.52
MSH6-210ENST00000540021 PRRT1Q99946 306 aa11.78□□□□□ -0.52
MSH6-210ENST00000540021 TEX101Q9BY14 249 aa11.78□□□□□ -0.52
MSH6-210ENST00000540021 SLC25A32Q9H2D1 315 aa11.78□□□□□ -0.52
MSH6-210ENST00000540021 CPNE7Q9UBL6 633 aa11.78□□□□□ -0.52
MSH6-210ENST00000540021 KCNMB2Q9Y691 235 aa11.78□□□□□ -0.52
MSH6-210ENST00000540021 GPR89AB7ZAQ6 455 aa11.78□□□□□ -0.52
MSH6-210ENST00000540021 AKR7A3O95154 331 aa11.78□□□□□ -0.52
MSH6-210ENST00000540021 TNFP01375 233 aa11.78□□□□□ -0.52
MSH6-210ENST00000540021 GPR89BP0CG08 455 aa11.78□□□□□ -0.52
MSH6-210ENST00000540021 RD3LP0DJH9 198 aa11.78□□□□□ -0.52
MSH6-210ENST00000540021 PNMTP11086 282 aa11.78□□□□□ -0.52
MSH6-210ENST00000540021 CPN1P15169 458 aa11.78□□□□□ -0.52
MSH6-210ENST00000540021 AMY2BP19961 511 aa11.78□□□□□ -0.52
MSH6-210ENST00000540021 RORAP35398 523 aa11.78□□□□□ -0.52
MSH6-210ENST00000540021 NPY4RP50391 375 aa11.78□□□□□ -0.52
MSH6-210ENST00000540021 PPP2CBP62714 309 aa11.78□□□□□ -0.52
MSH6-210ENST00000540021 PPP2CAP67775 309 aa11.78□□□□□ -0.52
MSH6-210ENST00000540021 EBPQ15125 230 aaKnown RBP11.78□□□□□ -0.52
MSH6-210ENST00000540021 SLC35D3Q5M8T2 416 aa11.78□□□□□ -0.52
MSH6-210ENST00000540021 ZNF660Q6AZW8 331 aaPredicted RBP11.78□□□□□ -0.52
MSH6-210ENST00000540021 EIF5AL1Q6IS14 154 aaKnown RBP11.78□□□□□ -0.52
MSH6-210ENST00000540021 CORO6Q6QEF8 472 aa11.78□□□□□ -0.52
MSH6-210ENST00000540021 TMEM184AQ6ZMB5 413 aa11.78□□□□□ -0.52
MSH6-210ENST00000540021 FAM71F1Q96KD3 344 aaPredicted RBP11.78□□□□□ -0.52
MSH6-210ENST00000540021 OR10A5Q9H207 317 aa11.78□□□□□ -0.52
MSH6-210ENST00000540021 LDAHQ9H6V9 325 aa11.78□□□□□ -0.52
MSH6-210ENST00000540021 GAREM1Q9H706 876 aa11.78□□□□□ -0.52
MSH6-210ENST00000540021 TMEM74BQ9NUR3 256 aa11.78□□□□□ -0.52
MSH6-210ENST00000540021 DNAJB12Q9NXW2 375 aaKnown RBP11.78□□□□□ -0.52
MSH6-210ENST00000540021 PRODH2Q9UF12 536 aa11.78□□□□□ -0.52
MSH6-210ENST00000540021 MRM2Q9UI43 246 aaKnown RBP11.78□□□□□ -0.52
MSH6-210ENST00000540021 PRELID3BQ9Y3B1 194 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms