RNA–Protein interactions for RNA: ENST00000539941.6

COPS3-212, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2 BASIC

Gene COPS3, Length 1,699 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-212ENST00000539941 HLA-DOBP13765 273 aa15.1■□□□□ 0.01
COPS3-212ENST00000539941 IFNGR1P15260 489 aa15.1■□□□□ 0.01
COPS3-212ENST00000539941 SPNP16150 400 aa15.1■□□□□ 0.01
COPS3-212ENST00000539941 GDF1P27539 372 aa15.1■□□□□ 0.01
COPS3-212ENST00000539941 CRABP1P29762 137 aa15.1■□□□□ 0.01
COPS3-212ENST00000539941 PYCR1P32322 319 aa15.1■□□□□ 0.01
COPS3-212ENST00000539941 CD79BP40259 229 aa15.1■□□□□ 0.01
COPS3-212ENST00000539941 NCS1P62166 190 aa15.1■□□□□ 0.01
COPS3-212ENST00000539941 LCN6P62502 163 aa15.1■□□□□ 0.01
COPS3-212ENST00000539941 LIPKQ5VXJ0 399 aa15.1■□□□□ 0.01
COPS3-212ENST00000539941 NHLRC1Q6VVB1 395 aa15.1■□□□□ 0.01
COPS3-212ENST00000539941 UEVLDQ8IX04 471 aa15.1■□□□□ 0.01
COPS3-212ENST00000539941 SYS1Q8N2H4 156 aa15.1■□□□□ 0.01
COPS3-212ENST00000539941 KDM8Q8N371 416 aa15.1■□□□□ 0.01
COPS3-212ENST00000539941 HAS2Q92819 552 aa15.1■□□□□ 0.01
COPS3-212ENST00000539941 TSSK2Q96PF2 358 aa15.1■□□□□ 0.01
COPS3-212ENST00000539941 TBX5Q99593 518 aa15.1■□□□□ 0.01
COPS3-212ENST00000539941 TIMP4Q99727 224 aa15.1■□□□□ 0.01
COPS3-212ENST00000539941 OR51E2Q9H255 320 aa15.1■□□□□ 0.01
COPS3-212ENST00000539941 SRA1Q9HD15 236 aaKnown RBP15.1■□□□□ 0.01
COPS3-212ENST00000539941 TRIM36Q9NQ86 728 aa15.1■□□□□ 0.01
COPS3-212ENST00000539941 BABAM2Q9NXR7 383 aa15.1■□□□□ 0.01
COPS3-212ENST00000539941 PLA2G3Q9NZ20 509 aa15.1■□□□□ 0.01
COPS3-212ENST00000539941 STUB1Q9UNE7 303 aa15.1■□□□□ 0.01
COPS3-212ENST00000539941 RASD1Q9Y272 281 aa15.1■□□□□ 0.01
COPS3-212ENST00000539941 LAMA5O15230 3695 aa15.1■□□□□ 0.01
COPS3-212ENST00000539941 A0A1W2PQL4 384 aaPredicted RBP15.09■□□□□ 0.01
COPS3-212ENST00000539941 PINLYPA6NC86 204 aa15.09■□□□□ 0.01
COPS3-212ENST00000539941 TRABD2BA6NFA1 517 aa15.09■□□□□ 0.01
COPS3-212ENST00000539941 DCTN6O00399 190 aa15.09■□□□□ 0.01
COPS3-212ENST00000539941 NME2P1O60361 137 aa15.09■□□□□ 0.01
COPS3-212ENST00000539941 VAMP5O95183 116 aa15.09■□□□□ 0.01
COPS3-212ENST00000539941 OPN1LWP04000 364 aa15.09■□□□□ 0.01
COPS3-212ENST00000539941 SP1P08047 785 aa15.09■□□□□ 0.01
COPS3-212ENST00000539941 PRKAR1AP10644 381 aa15.09■□□□□ 0.01
COPS3-212ENST00000539941 CD46P15529 392 aa15.09■□□□□ 0.01
COPS3-212ENST00000539941 NME2P22392 152 aa15.09■□□□□ 0.01
COPS3-212ENST00000539941 PTGS2P35354 604 aa15.09■□□□□ 0.01
COPS3-212ENST00000539941 NAA10P41227 235 aaPredicted RBP15.09■□□□□ 0.01
COPS3-212ENST00000539941 TAS2R43P59537 309 aa15.09■□□□□ 0.01
COPS3-212ENST00000539941 LSM3P62310 102 aaKnown RBP15.09■□□□□ 0.01
COPS3-212ENST00000539941 H3F3AP84243 136 aa15.09■□□□□ 0.01
COPS3-212ENST00000539941 DBPQ10586 325 aaPredicted RBP15.09■□□□□ 0.01
COPS3-212ENST00000539941 MELKQ14680 651 aa15.09■□□□□ 0.01
COPS3-212ENST00000539941 CARTPTQ16568 116 aa15.09■□□□□ 0.01
COPS3-212ENST00000539941 SPANXN2Q5MJ10 180 aa15.09■□□□□ 0.01
COPS3-212ENST00000539941 SLC25A25Q6KCM7 469 aa15.09■□□□□ 0.01
COPS3-212ENST00000539941 DNM1P34Q6PK57 102 aa15.09■□□□□ 0.01
COPS3-212ENST00000539941 YRDCQ86U90 279 aaKnown RBP15.09■□□□□ 0.01
COPS3-212ENST00000539941 SULF2Q8IWU5 870 aa15.09■□□□□ 0.01
COPS3-212ENST00000539941 SFXN2Q96NB2 322 aa15.09■□□□□ 0.01
COPS3-212ENST00000539941 CHCHD6Q9BRQ6 235 aa15.09■□□□□ 0.01
COPS3-212ENST00000539941 NAA11Q9BSU3 229 aaPredicted RBP15.09■□□□□ 0.01
COPS3-212ENST00000539941 ZNF703Q9H7S9 590 aaPredicted RBP15.09■□□□□ 0.01
COPS3-212ENST00000539941 B9D1Q9UPM9 204 aa15.09■□□□□ 0.01
COPS3-212ENST00000539941 SELENOFO60613 162 aa15.09■□□□□ 0.01
COPS3-212ENST00000539941 HPNP05981 417 aa15.09■□□□□ 0.01
COPS3-212ENST00000539941 SRSF6Q13247 344 aaKnown RBP15.09■□□□□ 0.01
COPS3-212ENST00000539941 TMEM225Q6GV28 225 aa15.09■□□□□ 0.01
COPS3-212ENST00000539941 ASB18Q6ZVZ8 466 aa15.09■□□□□ 0.01
COPS3-212ENST00000539941 TIGD4Q8IY51 512 aa15.09■□□□□ 0.01
COPS3-212ENST00000539941 PARP16Q8N5Y8 322 aa15.09■□□□□ 0.01
COPS3-212ENST00000539941 ZFAND1Q8TCF1 268 aa15.09■□□□□ 0.01
COPS3-212ENST00000539941 RNF170Q96K19 258 aa15.09■□□□□ 0.01
COPS3-212ENST00000539941 CEP19Q96LK0 163 aa15.09■□□□□ 0.01
COPS3-212ENST00000539941 KCNK17Q96T54 332 aa15.09■□□□□ 0.01
COPS3-212ENST00000539941 TSPAN10Q9H1Z9 355 aaPredicted RBP15.09■□□□□ 0.01
COPS3-212ENST00000539941 ZNF552Q9H707 407 aaPredicted RBP15.09■□□□□ 0.01
COPS3-212ENST00000539941 PAQR5Q9NXK6 330 aaPredicted RBP15.09■□□□□ 0.01
COPS3-212ENST00000539941 IGLV1-36A0A0B4J1U3 117 aa15.08■□□□□ 0
COPS3-212ENST00000539941 LOC100506127A0A0U1RQW1 187 aa15.08■□□□□ 0
COPS3-212ENST00000539941 ZNF670-ZNF695F2Z2N8 137 aa15.08■□□□□ 0
COPS3-212ENST00000539941 KLRC4-KLRK1H3BQV0 150 aa15.08■□□□□ 0
COPS3-212ENST00000539941 ERVH48-1M5A8F1 160 aa15.08■□□□□ 0
COPS3-212ENST00000539941 NOS1APO75052 506 aaPredicted RBP15.08■□□□□ 0
COPS3-212ENST00000539941 TRAPPC6AO75865 159 aa15.08■□□□□ 0
COPS3-212ENST00000539941 LALBAP00709 142 aa15.08■□□□□ 0
COPS3-212ENST00000539941 CD53P19397 219 aa15.08■□□□□ 0
COPS3-212ENST00000539941 WT1P19544 449 aaPredicted RBP15.08■□□□□ 0
COPS3-212ENST00000539941 GABRA5P31644 462 aa15.08■□□□□ 0
COPS3-212ENST00000539941 CRYBB2P43320 205 aa15.08■□□□□ 0
COPS3-212ENST00000539941 POU4F3Q15319 338 aa15.08■□□□□ 0
COPS3-212ENST00000539941 HYAL4Q2M3T9 481 aa15.08■□□□□ 0
COPS3-212ENST00000539941 KLBQ86Z14 1044 aa15.08■□□□□ 0
COPS3-212ENST00000539941 ZNF511Q8NB15 262 aa15.08■□□□□ 0
COPS3-212ENST00000539941 MFRPQ9BY79 579 aa15.08■□□□□ 0
COPS3-212ENST00000539941 NIPAL2Q9H841 368 aa15.08■□□□□ 0
COPS3-212ENST00000539941 ISG20L2Q9H9L3 353 aaKnown RBP15.08■□□□□ 0
COPS3-212ENST00000539941 C12orf4Q9NQ89 552 aa15.08■□□□□ 0
COPS3-212ENST00000539941 B3GNT2Q9NY97 397 aa15.08■□□□□ 0
COPS3-212ENST00000539941 KLHL13Q9P2N7 655 aa15.08■□□□□ 0
COPS3-212ENST00000539941 SSR3Q9UNL2 185 aa15.08■□□□□ 0
COPS3-212ENST00000539941 A0A0J9YW62 118 aa15.07■□□□□ 0
COPS3-212ENST00000539941 FAM171A2A8MVW0 826 aa15.07■□□□□ 0
COPS3-212ENST00000539941 TRAF3IP2O43734 574 aaPredicted RBP15.07■□□□□ 0
COPS3-212ENST00000539941 SLC16A7O60669 478 aa15.07■□□□□ 0
COPS3-212ENST00000539941 GPX5O75715 221 aa15.07■□□□□ 0
COPS3-212ENST00000539941 ZNF43P17038 809 aa15.07■□□□□ 0
COPS3-212ENST00000539941 HTR2BP41595 481 aa15.07■□□□□ 0
COPS3-212ENST00000539941 AGFG1P52594 562 aaKnown RBP15.07■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms