RNA–Protein interactions for RNA: ENST00000539559.6

TMEM260-203, Transcript of transmembrane protein 260, humanhuman

TSL 1 (best)

Gene TMEM260, Length 2,680 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-203ENST00000539559 SCGB2B2Q4G0G5 96 aa18.35■□□□□ 0.53
TMEM260-203ENST00000539559 MDGA2Q7Z553 956 aa18.35■□□□□ 0.53
TMEM260-203ENST00000539559 LRRC75AQ8NAA5 344 aa18.35■□□□□ 0.53
TMEM260-203ENST00000539559 BPIFCQ8NFQ6 507 aa18.35■□□□□ 0.53
TMEM260-203ENST00000539559 STEAP2Q8NFT2 490 aa18.35■□□□□ 0.53
TMEM260-203ENST00000539559 ZNF417Q8TAU3 575 aa18.35■□□□□ 0.53
TMEM260-203ENST00000539559 GAS2L1Q99501 681 aaPredicted RBP18.35■□□□□ 0.53
TMEM260-203ENST00000539559 MRI1Q9BV20 369 aa18.35■□□□□ 0.53
TMEM260-203ENST00000539559 TCEAL2Q9H3H9 227 aaPredicted RBP18.35■□□□□ 0.53
TMEM260-203ENST00000539559 CGGBP1Q9UFW8 167 aaPredicted RBP18.35■□□□□ 0.53
TMEM260-203ENST00000539559 RFPL4AA6NLU0 287 aa18.35■□□□□ 0.53
TMEM260-203ENST00000539559 RFPL4AL1F8VTS6 287 aa18.35■□□□□ 0.53
TMEM260-203ENST00000539559 PRAMEF2O60811 474 aa18.35■□□□□ 0.53
TMEM260-203ENST00000539559 CELA2BP08218 269 aaPredicted RBP18.35■□□□□ 0.53
TMEM260-203ENST00000539559 ALOX5APP20292 161 aa18.35■□□□□ 0.53
TMEM260-203ENST00000539559 CTHP32929 405 aa18.35■□□□□ 0.53
TMEM260-203ENST00000539559 BEST3Q8N1M1 668 aa18.35■□□□□ 0.53
TMEM260-203ENST00000539559 PHOSPHO1Q8TCT1 267 aa18.35■□□□□ 0.53
TMEM260-203ENST00000539559 HOXB13Q92826 284 aaPredicted RBP18.35■□□□□ 0.53
TMEM260-203ENST00000539559 WNT2BQ93097 391 aa18.35■□□□□ 0.53
TMEM260-203ENST00000539559 BMFQ96LC9 184 aa18.35■□□□□ 0.53
TMEM260-203ENST00000539559 NPAS1Q99742 590 aa18.35■□□□□ 0.53
TMEM260-203ENST00000539559 SLC6A5Q9Y345 797 aa18.35■□□□□ 0.53
TMEM260-203ENST00000539559 A0A1B0GTQ1 180 aa18.34■□□□□ 0.53
TMEM260-203ENST00000539559 A6NCN8 305 aa18.34■□□□□ 0.53
TMEM260-203ENST00000539559 WISP1O95388 367 aa18.34■□□□□ 0.53
TMEM260-203ENST00000539559 PNPP00491 289 aa18.34■□□□□ 0.53
TMEM260-203ENST00000539559 AMY2AP04746 511 aa18.34■□□□□ 0.53
TMEM260-203ENST00000539559 RPA2P15927 270 aa18.34■□□□□ 0.53
TMEM260-203ENST00000539559 ZNF28P17035 718 aa18.34■□□□□ 0.53
TMEM260-203ENST00000539559 NKPD1Q17RQ9 610 aa18.34■□□□□ 0.53
TMEM260-203ENST00000539559 C1QL3Q5VWW1 255 aa18.34■□□□□ 0.53
TMEM260-203ENST00000539559 SDR16C5Q8N3Y7 309 aa18.34■□□□□ 0.53
TMEM260-203ENST00000539559 C12orf45Q8N5I9 185 aaPredicted RBP18.34■□□□□ 0.53
TMEM260-203ENST00000539559 PMM1Q92871 262 aa18.34■□□□□ 0.53
TMEM260-203ENST00000539559 SAV1Q9H4B6 383 aaPredicted RBP18.34■□□□□ 0.53
TMEM260-203ENST00000539559 FBRSQ9HAH7 460 aa18.34■□□□□ 0.53
TMEM260-203ENST00000539559 ELOVL3Q9HB03 270 aa18.34■□□□□ 0.53
TMEM260-203ENST00000539559 TMEM82A0PJX8 343 aa18.34■□□□□ 0.53
TMEM260-203ENST00000539559 EFCAB7A8K855 629 aa18.34■□□□□ 0.53
TMEM260-203ENST00000539559 RAB3DO95716 219 aa18.34■□□□□ 0.53
TMEM260-203ENST00000539559 LTBRP36941 435 aa18.34■□□□□ 0.53
TMEM260-203ENST00000539559 TAF13Q15543 124 aa18.34■□□□□ 0.53
TMEM260-203ENST00000539559 C15orf40Q8WUR7 153 aa18.34■□□□□ 0.53
TMEM260-203ENST00000539559 MMP25Q9NPA2 562 aa18.34■□□□□ 0.53
TMEM260-203ENST00000539559 HIF3AQ9Y2N7 669 aa18.34■□□□□ 0.53
TMEM260-203ENST00000539559 AQP8O94778 261 aa18.33■□□□□ 0.53
TMEM260-203ENST00000539559 HOXB2P14652 356 aa18.33■□□□□ 0.53
TMEM260-203ENST00000539559 ST6GAL1P15907 406 aa18.33■□□□□ 0.53
TMEM260-203ENST00000539559 MC2RQ01718 297 aa18.33■□□□□ 0.53
TMEM260-203ENST00000539559 NFATC4Q14934 902 aa18.33■□□□□ 0.53
TMEM260-203ENST00000539559 RAB11BQ15907 218 aa18.33■□□□□ 0.53
TMEM260-203ENST00000539559 MEP1BQ16820 701 aa18.33■□□□□ 0.53
TMEM260-203ENST00000539559 OR4S1Q8NGB4 309 aa18.33■□□□□ 0.53
TMEM260-203ENST00000539559 MCHR2Q969V1 340 aa18.33■□□□□ 0.53
TMEM260-203ENST00000539559 C4orf45Q96LM5 186 aa18.33■□□□□ 0.53
TMEM260-203ENST00000539559 WDR92Q96MX6 357 aa18.33■□□□□ 0.53
TMEM260-203ENST00000539559 GPX7Q96SL4 187 aaPredicted RBP18.33■□□□□ 0.53
TMEM260-203ENST00000539559 ZNF416Q9BWM5 594 aa18.33■□□□□ 0.53
TMEM260-203ENST00000539559 TAS2R8Q9NYW2 309 aa18.33■□□□□ 0.53
TMEM260-203ENST00000539559 GLS2Q9UI32 602 aa18.33■□□□□ 0.53
TMEM260-203ENST00000539559 TDRD6O60522 2096 aaKnown RBP18.33■□□□□ 0.53
TMEM260-203ENST00000539559 NUP210LQ5VU65 1888 aa18.33■□□□□ 0.52
TMEM260-203ENST00000539559 STARP49675 285 aa18.33■□□□□ 0.52
TMEM260-203ENST00000539559 SLC25A1P53007 311 aa18.33■□□□□ 0.52
TMEM260-203ENST00000539559 ZNF169Q14929 603 aaPredicted RBP18.33■□□□□ 0.52
TMEM260-203ENST00000539559 AVL9Q8NBF6 648 aa18.33■□□□□ 0.52
TMEM260-203ENST00000539559 KLF8O95600 359 aaPredicted RBP18.32■□□□□ 0.52
TMEM260-203ENST00000539559 MOGAT2Q3SYC2 334 aa18.32■□□□□ 0.52
TMEM260-203ENST00000539559 NKD1Q969G9 470 aa18.32■□□□□ 0.52
TMEM260-203ENST00000539559 FAM131CQ96AQ9 280 aa18.32■□□□□ 0.52
TMEM260-203ENST00000539559 INTS14Q96SY0 518 aa18.32■□□□□ 0.52
TMEM260-203ENST00000539559 MICU1Q9BPX6 476 aa18.32■□□□□ 0.52
TMEM260-203ENST00000539559 ADAT1Q9BUB4 502 aaKnown RBP18.32■□□□□ 0.52
TMEM260-203ENST00000539559 ZNF576Q9H609 170 aa18.32■□□□□ 0.52
TMEM260-203ENST00000539559 DCDC2BA2VCK2 349 aa18.32■□□□□ 0.52
TMEM260-203ENST00000539559 OR5H14A6NHG9 310 aa18.32■□□□□ 0.52
TMEM260-203ENST00000539559 TMEM212A6NML5 194 aa18.32■□□□□ 0.52
TMEM260-203ENST00000539559 C2orf74A8MZ97 194 aa18.32■□□□□ 0.52
TMEM260-203ENST00000539559 ITGB2P05107 769 aa18.32■□□□□ 0.52
TMEM260-203ENST00000539559 ATG4DQ86TL0 474 aaPredicted RBP18.32■□□□□ 0.52
TMEM260-203ENST00000539559 CD163Q86VB7 1156 aa18.32■□□□□ 0.52
TMEM260-203ENST00000539559 TDHQ8IZJ6 230 aa18.32■□□□□ 0.52
TMEM260-203ENST00000539559 RSC1A1Q92681 617 aa18.32■□□□□ 0.52
TMEM260-203ENST00000539559 SEH1LQ96EE3 360 aa18.32■□□□□ 0.52
TMEM260-203ENST00000539559 ZNF471Q9BX82 626 aaPredicted RBP18.32■□□□□ 0.52
TMEM260-203ENST00000539559 PLCL2Q9UPR0 1127 aa18.32■□□□□ 0.52
TMEM260-203ENST00000539559 A0A1W2PQF6 199 aa18.31■□□□□ 0.52
TMEM260-203ENST00000539559 FITM1A5D6W6 292 aa18.31■□□□□ 0.52
TMEM260-203ENST00000539559 FAM25EA8MYX2 175 aa18.31■□□□□ 0.52
TMEM260-203ENST00000539559 EIF4E2O60573 245 aaKnown RBP18.31■□□□□ 0.52
TMEM260-203ENST00000539559 MFGE8Q08431 387 aaPredicted RBP18.31■□□□□ 0.52
TMEM260-203ENST00000539559 EIF2B5Q13144 721 aaKnown RBP18.31■□□□□ 0.52
TMEM260-203ENST00000539559 ALG11Q2TAA5 492 aa18.31■□□□□ 0.52
TMEM260-203ENST00000539559 TMEM88Q6PEY1 159 aa18.31■□□□□ 0.52
TMEM260-203ENST00000539559 MED25Q71SY5 747 aa18.31■□□□□ 0.52
TMEM260-203ENST00000539559 PRR22Q8IZ63 422 aa18.31■□□□□ 0.52
TMEM260-203ENST00000539559 ZNF321PQ8N8H1 164 aa18.31■□□□□ 0.52
TMEM260-203ENST00000539559 TMEM185AQ8NFB2 350 aa18.31■□□□□ 0.52
TMEM260-203ENST00000539559 OR51A2Q8NGJ7 313 aa18.31■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms