RNA–Protein interactions for RNA: ENST00000539552.1

AC055720.1-201, humanhuman

TSL 5 BASIC

Gene AC055720.1, Length 475 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055720.1-201ENST00000539552 MAGEA6P43360 314 aa3.26□□□□□ -1.89
AC055720.1-201ENST00000539552 BRCC3P46736 316 aa3.26□□□□□ -1.89
AC055720.1-201ENST00000539552 RFX5P48382 616 aaPredicted RBP3.26□□□□□ -1.89
AC055720.1-201ENST00000539552 AMTP48728 403 aa3.26□□□□□ -1.89
AC055720.1-201ENST00000539552 TUFMP49411 452 aaKnown RBP3.26□□□□□ -1.89
AC055720.1-201ENST00000539552 TMED10P49755 219 aaKnown RBP3.26□□□□□ -1.89
AC055720.1-201ENST00000539552 RGS6P49758 472 aa3.26□□□□□ -1.89
AC055720.1-201ENST00000539552 OR1D5P58170 312 aa3.26□□□□□ -1.89
AC055720.1-201ENST00000539552 PROK1P58294 105 aa3.26□□□□□ -1.89
AC055720.1-201ENST00000539552 B3GALT5-AS1P59052 145 aa3.26□□□□□ -1.89
AC055720.1-201ENST00000539552 ARF6P62330 175 aa3.26□□□□□ -1.89
AC055720.1-201ENST00000539552 RGS1Q08116 209 aa3.26□□□□□ -1.89
AC055720.1-201ENST00000539552 RIPPLY1Q0D2K3 151 aa3.26□□□□□ -1.89
AC055720.1-201ENST00000539552 CAPRIN1Q14444 709 aaKnown RBP3.26□□□□□ -1.89
AC055720.1-201ENST00000539552 RBM39Q14498 530 aaKnown RBP3.26□□□□□ -1.89
AC055720.1-201ENST00000539552 ZNF234Q14588 700 aa3.26□□□□□ -1.89
AC055720.1-201ENST00000539552 HLFQ16534 295 aa3.26□□□□□ -1.89
AC055720.1-201ENST00000539552 RPEL1Q2QD12 228 aa3.26□□□□□ -1.89
AC055720.1-201ENST00000539552 PRTGQ2VWP7 1150 aa3.26□□□□□ -1.89
AC055720.1-201ENST00000539552 KRTAP27-1Q3LI81 207 aa3.26□□□□□ -1.89
AC055720.1-201ENST00000539552 DMRTC1Q5HYR2 192 aa3.26□□□□□ -1.89
AC055720.1-201ENST00000539552 FGD3Q5JSP0 725 aa3.26□□□□□ -1.89
AC055720.1-201ENST00000539552 MARCH8Q5T0T0 291 aa3.26□□□□□ -1.89
AC055720.1-201ENST00000539552 N4BP2L1Q5TBK1 243 aaPredicted RBP3.26□□□□□ -1.89
AC055720.1-201ENST00000539552 BSPRYQ5W0U4 402 aa3.26□□□□□ -1.89
AC055720.1-201ENST00000539552 APOBEC3HQ6NTF7 200 aaKnown RBP3.26□□□□□ -1.89
AC055720.1-201ENST00000539552 PNCKQ6P2M8 343 aa3.26□□□□□ -1.89
AC055720.1-201ENST00000539552 SPESP1Q6UW49 350 aa3.26□□□□□ -1.89
AC055720.1-201ENST00000539552 HACD2Q6Y1H2 254 aa3.26□□□□□ -1.89
AC055720.1-201ENST00000539552 MBOAT1Q6ZNC8 495 aa3.26□□□□□ -1.89
AC055720.1-201ENST00000539552 RTL4Q6ZR62 310 aa3.26□□□□□ -1.89
AC055720.1-201ENST00000539552 Q6ZSV7 163 aa3.26□□□□□ -1.89
AC055720.1-201ENST00000539552 SLC25A48Q6ZT89 311 aaKnown RBP3.26□□□□□ -1.89
AC055720.1-201ENST00000539552 LINC00336Q6ZUF6 198 aa3.26□□□□□ -1.89
AC055720.1-201ENST00000539552 ABHD13Q7L211 337 aa3.26□□□□□ -1.89
AC055720.1-201ENST00000539552 TIPARPQ7Z3E1 657 aaKnown RBP3.26□□□□□ -1.89
AC055720.1-201ENST00000539552 OR2W3Q7Z3T1 314 aa3.26□□□□□ -1.89
AC055720.1-201ENST00000539552 HSD11B1LQ7Z5J1 315 aa3.26□□□□□ -1.89
AC055720.1-201ENST00000539552 SETD3Q86TU7 594 aaPredicted RBP3.26□□□□□ -1.89
AC055720.1-201ENST00000539552 ZFAND4Q86XD8 727 aa3.26□□□□□ -1.89
AC055720.1-201ENST00000539552 ZNF677Q86XU0 584 aa3.26□□□□□ -1.89
AC055720.1-201ENST00000539552 SLC13A5Q86YT5 568 aaPredicted RBP3.26□□□□□ -1.89
AC055720.1-201ENST00000539552 FUNDC1Q8IVP5 155 aa3.26□□□□□ -1.89
AC055720.1-201ENST00000539552 EID3Q8N140 333 aa3.26□□□□□ -1.89
AC055720.1-201ENST00000539552 ZNF843Q8N446 348 aa3.26□□□□□ -1.89
AC055720.1-201ENST00000539552 ZNF738Q8NE65 137 aa3.26□□□□□ -1.89
AC055720.1-201ENST00000539552 OR10V1Q8NGI7 309 aa3.26□□□□□ -1.89
AC055720.1-201ENST00000539552 OR5M9Q8NGP3 310 aa3.26□□□□□ -1.89
AC055720.1-201ENST00000539552 OR6X1Q8NH79 312 aa3.26□□□□□ -1.89
AC055720.1-201ENST00000539552 CNIH3Q8TBE1 160 aa3.26□□□□□ -1.89
AC055720.1-201ENST00000539552 AENQ8WTP8 325 aaKnown RBP3.26□□□□□ -1.89
AC055720.1-201ENST00000539552 PHF10Q8WUB8 498 aaKnown RBP3.26□□□□□ -1.89
AC055720.1-201ENST00000539552 TFGQ92734 400 aaPredicted RBP3.26□□□□□ -1.89
AC055720.1-201ENST00000539552 PSMG2Q969U7 264 aa3.26□□□□□ -1.89
AC055720.1-201ENST00000539552 TBRG4Q969Z0 631 aaKnown RBP eCLIP3.26□□□□□ -1.89
AC055720.1-201ENST00000539552 RAD51AP1Q96B01 352 aa3.26□□□□□ -1.89
AC055720.1-201ENST00000539552 APH1AQ96BI3 265 aa3.26□□□□□ -1.89
AC055720.1-201ENST00000539552 CXorf40BQ96DE9 158 aa3.26□□□□□ -1.89
AC055720.1-201ENST00000539552 CCDC126Q96EE4 140 aa3.26□□□□□ -1.89
AC055720.1-201ENST00000539552 ZNF641Q96N77 438 aaPredicted RBP3.26□□□□□ -1.89
AC055720.1-201ENST00000539552 NEDD4LQ96PU5 975 aa3.26□□□□□ -1.89
AC055720.1-201ENST00000539552 TAAR1Q96RJ0 339 aa3.26□□□□□ -1.89
AC055720.1-201ENST00000539552 CSF3RQ99062 836 aa3.26□□□□□ -1.89
AC055720.1-201ENST00000539552 ATP5SQ99766 215 aa3.26□□□□□ -1.89
AC055720.1-201ENST00000539552 TMEM121Q9BTD3 319 aa3.26□□□□□ -1.89
AC055720.1-201ENST00000539552 DCUN1D5Q9BTE7 237 aa3.26□□□□□ -1.89
AC055720.1-201ENST00000539552 RSG1Q9BU20 258 aa3.26□□□□□ -1.89
AC055720.1-201ENST00000539552 ZNF426Q9BUY5 554 aa3.26□□□□□ -1.89
AC055720.1-201ENST00000539552 RAB34Q9BZG1 259 aa3.26□□□□□ -1.89
AC055720.1-201ENST00000539552 ACTR3CQ9C0K3 210 aaPredicted RBP3.26□□□□□ -1.89
AC055720.1-201ENST00000539552 ELOVL4Q9GZR5 314 aa3.26□□□□□ -1.89
AC055720.1-201ENST00000539552 OR51B6Q9H340 312 aa3.26□□□□□ -1.89
AC055720.1-201ENST00000539552 SIRT7Q9NRC8 400 aa3.26□□□□□ -1.89
AC055720.1-201ENST00000539552 CUTCQ9NTM9 273 aa3.26□□□□□ -1.89
AC055720.1-201ENST00000539552 RMND1Q9NWS8 449 aa3.26□□□□□ -1.89
AC055720.1-201ENST00000539552 C19orf25Q9UFG5 118 aaPredicted RBP3.26□□□□□ -1.89
AC055720.1-201ENST00000539552 MAN1B1Q9UKM7 699 aa3.26□□□□□ -1.89
AC055720.1-201ENST00000539552 SCML2Q9UQR0 700 aa3.26□□□□□ -1.89
AC055720.1-201ENST00000539552 VDAC3Q9Y277 283 aa3.26□□□□□ -1.89
AC055720.1-201ENST00000539552 SLC17A4Q9Y2C5 497 aa3.26□□□□□ -1.89
AC055720.1-201ENST00000539552 MRPS28Q9Y2Q9 187 aaKnown RBP3.26□□□□□ -1.89
AC055720.1-201ENST00000539552 TBL2Q9Y4P3 447 aaKnown RBP3.26□□□□□ -1.89
AC055720.1-201ENST00000539552 COL6A5A8TX70 2615 aa3.25□□□□□ -1.89
AC055720.1-201ENST00000539552 A0A0G2JNG1 304 aa3.25□□□□□ -1.89
AC055720.1-201ENST00000539552 A0A0J9YVX5 310 aa3.25□□□□□ -1.89
AC055720.1-201ENST00000539552 SMIM35A0A1B0GVV1 85 aa3.25□□□□□ -1.89
AC055720.1-201ENST00000539552 ZNF814B7Z6K7 855 aa3.25□□□□□ -1.89
AC055720.1-201ENST00000539552 M0QXV9 152 aa3.25□□□□□ -1.89
AC055720.1-201ENST00000539552 RGS16O15492 202 aaPredicted RBP3.25□□□□□ -1.89
AC055720.1-201ENST00000539552 SPRY3O43610 288 aa3.25□□□□□ -1.89
AC055720.1-201ENST00000539552 SOX30O94993 753 aa3.25□□□□□ -1.89
AC055720.1-201ENST00000539552 PLEKHA8P1O95397 391 aa3.25□□□□□ -1.89
AC055720.1-201ENST00000539552 C1orf105O95561 183 aa3.25□□□□□ -1.89
AC055720.1-201ENST00000539552 IGSF6O95976 241 aa3.25□□□□□ -1.89
AC055720.1-201ENST00000539552 UMODP07911 640 aa3.25□□□□□ -1.89
AC055720.1-201ENST00000539552 NGFRP08138 427 aa3.25□□□□□ -1.89
AC055720.1-201ENST00000539552 OR4E1P0C645 316 aa3.25□□□□□ -1.89
AC055720.1-201ENST00000539552 OCM2P0CE71 109 aa3.25□□□□□ -1.89
AC055720.1-201ENST00000539552 PET100P0DJ07 73 aa3.25□□□□□ -1.89
AC055720.1-201ENST00000539552 PSMB5P28074 263 aa3.25□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms