RNA–Protein interactions for RNA: ENST00000539522.2

CCDC42-202, Transcript of coiled-coil domain containing 42, humanhuman

TSL 1 (best) BASIC

Gene CCDC42, Length 1,087 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC42-202ENST00000539522 ERMAPQ96PL5 475 aaPredicted RBP11.39□□□□□ -0.59
CCDC42-202ENST00000539522 IFT27Q9BW83 186 aa11.39□□□□□ -0.59
CCDC42-202ENST00000539522 NOX3Q9HBY0 568 aa11.39□□□□□ -0.59
CCDC42-202ENST00000539522 VSX1Q9NZR4 365 aaPredicted RBP11.39□□□□□ -0.59
CCDC42-202ENST00000539522 PLEKHB1Q9UF11 243 aaPredicted RBP11.39□□□□□ -0.59
CCDC42-202ENST00000539522 CENPEQ02224 2701 aa11.39□□□□□ -0.59
CCDC42-202ENST00000539522 CSMD2Q7Z408 3487 aa11.39□□□□□ -0.59
CCDC42-202ENST00000539522 LRBAP50851 2863 aa11.38□□□□□ -0.59
CCDC42-202ENST00000539522 A0A087WXM4 84 aa11.38□□□□□ -0.59
CCDC42-202ENST00000539522 A0A1W2PR80 420 aa11.38□□□□□ -0.59
CCDC42-202ENST00000539522 PRSS37A4D1T9 235 aa11.38□□□□□ -0.59
CCDC42-202ENST00000539522 OR6C68A6NDL8 312 aa11.38□□□□□ -0.59
CCDC42-202ENST00000539522 SNTNA6NMZ2 147 aa11.38□□□□□ -0.59
CCDC42-202ENST00000539522 ZNF726A6NNF4 738 aa11.38□□□□□ -0.59
CCDC42-202ENST00000539522 CENPBD1B2RD01 187 aa11.38□□□□□ -0.59
CCDC42-202ENST00000539522 C16orf97H3BN30 126 aa11.38□□□□□ -0.59
CCDC42-202ENST00000539522 ARHGEF9O43307 516 aa11.38□□□□□ -0.59
CCDC42-202ENST00000539522 AKAP8O43823 692 aaKnown RBP11.38□□□□□ -0.59
CCDC42-202ENST00000539522 RAD51DO75771 328 aa11.38□□□□□ -0.59
CCDC42-202ENST00000539522 IGHG1P01857 330 aa11.38□□□□□ -0.59
CCDC42-202ENST00000539522 QDPRP09417 244 aa11.38□□□□□ -0.59
CCDC42-202ENST00000539522 CTLA4P16410 223 aa11.38□□□□□ -0.59
CCDC42-202ENST00000539522 LOXP28300 417 aaPredicted RBP11.38□□□□□ -0.59
CCDC42-202ENST00000539522 CSNK1A1P48729 337 aa11.38□□□□□ -0.59
CCDC42-202ENST00000539522 ARF1P84077 181 aaKnown RBP11.38□□□□□ -0.59
CCDC42-202ENST00000539522 HIKESHIQ53FT3 197 aa11.38□□□□□ -0.59
CCDC42-202ENST00000539522 SLC35F1Q5T1Q4 408 aa11.38□□□□□ -0.59
CCDC42-202ENST00000539522 C10orf128Q5T292 105 aa11.38□□□□□ -0.59
CCDC42-202ENST00000539522 OTPQ5XKR4 325 aa11.38□□□□□ -0.59
CCDC42-202ENST00000539522 SP5Q6BEB4 398 aaPredicted RBP11.38□□□□□ -0.59
CCDC42-202ENST00000539522 FOXL2NBQ6ZUU3 175 aa11.38□□□□□ -0.59
CCDC42-202ENST00000539522 ZNF627Q7L945 461 aa11.38□□□□□ -0.59
CCDC42-202ENST00000539522 BHLHA15Q7RTS1 189 aaPredicted RBP11.38□□□□□ -0.59
CCDC42-202ENST00000539522 ZNF295-AS1Q8N0V1 137 aa11.38□□□□□ -0.59
CCDC42-202ENST00000539522 OR4K13Q8NH42 304 aa11.38□□□□□ -0.59
CCDC42-202ENST00000539522 FGFBP3Q8TAT2 258 aa11.38□□□□□ -0.59
CCDC42-202ENST00000539522 TMEM163Q8TC26 289 aa11.38□□□□□ -0.59
CCDC42-202ENST00000539522 APH1BQ8WW43 257 aa11.38□□□□□ -0.59
CCDC42-202ENST00000539522 IPCEF1Q8WWN9 437 aaPredicted RBP11.38□□□□□ -0.59
CCDC42-202ENST00000539522 NABP1Q96AH0 204 aa11.38□□□□□ -0.59
CCDC42-202ENST00000539522 TSSK2Q96PF2 358 aa11.38□□□□□ -0.59
CCDC42-202ENST00000539522 IL4I1Q96RQ9 567 aa11.38□□□□□ -0.59
CCDC42-202ENST00000539522 NMNAT3Q96T66 252 aa11.38□□□□□ -0.59
CCDC42-202ENST00000539522 HCAR1Q9BXC0 346 aa11.38□□□□□ -0.59
CCDC42-202ENST00000539522 ACTR6Q9GZN1 396 aa11.38□□□□□ -0.59
CCDC42-202ENST00000539522 FN3KQ9H479 309 aa11.38□□□□□ -0.59
CCDC42-202ENST00000539522 TAS2R16Q9NYV7 291 aa11.38□□□□□ -0.59
CCDC42-202ENST00000539522 NPAP1Q9NZP6 1156 aa11.38□□□□□ -0.59
CCDC42-202ENST00000539522 CRIM1Q9NZV1 1036 aa11.38□□□□□ -0.59
CCDC42-202ENST00000539522 GRHPRQ9UBQ7 328 aa11.38□□□□□ -0.59
CCDC42-202ENST00000539522 UPB1Q9UBR1 384 aa11.38□□□□□ -0.59
CCDC42-202ENST00000539522 GPR52Q9Y2T5 361 aa11.38□□□□□ -0.59
CCDC42-202ENST00000539522 SLC1A7O00341 560 aa11.37□□□□□ -0.59
CCDC42-202ENST00000539522 SURF4O15260 269 aa11.37□□□□□ -0.59
CCDC42-202ENST00000539522 PRKYO43930 277 aa11.37□□□□□ -0.59
CCDC42-202ENST00000539522 MRPS14O60783 128 aaKnown RBP11.37□□□□□ -0.59
CCDC42-202ENST00000539522 GPANK1O95872 356 aa11.37□□□□□ -0.59
CCDC42-202ENST00000539522 IFNGP01579 166 aa11.37□□□□□ -0.59
CCDC42-202ENST00000539522 PSKH1P11801 424 aa11.37□□□□□ -0.59
CCDC42-202ENST00000539522 EEF1B2P24534 225 aaKnown RBP11.37□□□□□ -0.59
CCDC42-202ENST00000539522 NOS3P29474 1203 aa11.37□□□□□ -0.59
CCDC42-202ENST00000539522 FMO3P31513 532 aa11.37□□□□□ -0.59
CCDC42-202ENST00000539522 CDAP32320 146 aa11.37□□□□□ -0.59
CCDC42-202ENST00000539522 GABARAPL2P60520 117 aa11.37□□□□□ -0.59
CCDC42-202ENST00000539522 TUBA4AP68366 448 aa11.37□□□□□ -0.59
CCDC42-202ENST00000539522 BLMHQ13867 455 aa11.37□□□□□ -0.59
CCDC42-202ENST00000539522 TAB1Q15750 504 aa11.37□□□□□ -0.59
CCDC42-202ENST00000539522 FAM205BPQ63HN1 556 aa11.37□□□□□ -0.59
CCDC42-202ENST00000539522 GPR139Q6DWJ6 353 aa11.37□□□□□ -0.59
CCDC42-202ENST00000539522 HDDC2Q7Z4H3 204 aa11.37□□□□□ -0.59
CCDC42-202ENST00000539522 GPR137CQ8N3F9 429 aa11.37□□□□□ -0.59
CCDC42-202ENST00000539522 SLC37A3Q8NCC5 494 aa11.37□□□□□ -0.59
CCDC42-202ENST00000539522 SDR9C7Q8NEX9 313 aa11.37□□□□□ -0.59
CCDC42-202ENST00000539522 OR6N1Q8NGY5 312 aa11.37□□□□□ -0.59
CCDC42-202ENST00000539522 ZNF75AQ96N20 296 aa11.37□□□□□ -0.59
CCDC42-202ENST00000539522 ALG12Q9BV10 488 aa11.37□□□□□ -0.59
CCDC42-202ENST00000539522 MRPS26Q9BYN8 205 aaKnown RBP11.37□□□□□ -0.59
CCDC42-202ENST00000539522 ULBP2Q9BZM5 246 aa11.37□□□□□ -0.59
CCDC42-202ENST00000539522 NMNAT2Q9BZQ4 307 aa11.37□□□□□ -0.59
CCDC42-202ENST00000539522 SYT4Q9H2B2 425 aa11.37□□□□□ -0.59
CCDC42-202ENST00000539522 DUSP21Q9H596 190 aa11.37□□□□□ -0.59
CCDC42-202ENST00000539522 H2AFY2Q9P0M6 372 aaPredicted RBP11.37□□□□□ -0.59
CCDC42-202ENST00000539522 AASSQ9UDR5 926 aa11.37□□□□□ -0.59
CCDC42-202ENST00000539522 SLC25A15Q9Y619 301 aa11.37□□□□□ -0.59
CCDC42-202ENST00000539522 TACC2O95359 2948 aa11.37□□□□□ -0.59
CCDC42-202ENST00000539522 ANKHD1Q8IWZ3 2542 aaKnown RBP11.37□□□□□ -0.59
CCDC42-202ENST00000539522 A0A096LPE4 126 aa11.36□□□□□ -0.59
CCDC42-202ENST00000539522 IGLV1-36A0A0B4J1U3 117 aa11.36□□□□□ -0.59
CCDC42-202ENST00000539522 A0A1W2PPR1 153 aa11.36□□□□□ -0.59
CCDC42-202ENST00000539522 A0A1W2PPZ6 126 aa11.36□□□□□ -0.59
CCDC42-202ENST00000539522 OR6C65A6NJZ3 312 aa11.36□□□□□ -0.59
CCDC42-202ENST00000539522 OR5H1A6NKK0 313 aa11.36□□□□□ -0.59
CCDC42-202ENST00000539522 ZNF99A8MXY4 864 aaPredicted RBP11.36□□□□□ -0.59
CCDC42-202ENST00000539522 ZNF587BE7ETH6 402 aa11.36□□□□□ -0.59
CCDC42-202ENST00000539522 PTGES3LE9PB15 166 aa11.36□□□□□ -0.59
CCDC42-202ENST00000539522 M0R129 80 aa11.36□□□□□ -0.59
CCDC42-202ENST00000539522 DHHO43323 396 aa11.36□□□□□ -0.59
CCDC42-202ENST00000539522 FAM20BO75063 409 aa11.36□□□□□ -0.59
CCDC42-202ENST00000539522 CLUP10909 449 aa11.36□□□□□ -0.59
CCDC42-202ENST00000539522 CLRN1P58418 232 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 91.4 ms