RNA–Protein interactions for RNA: ENST00000538239.5

LRP6-203, Transcript of LDL receptor related protein 6, humanhuman

TSL 1 (best)

Gene LRP6, Length 7,812 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP6-203ENST00000538239 SYT9Q86SS6 491 aa4.88□□□□□ -1.63
LRP6-203ENST00000538239 OR4A16Q8NH70 328 aa4.88□□□□□ -1.63
LRP6-203ENST00000538239 SLC7A13Q8TCU3 470 aa4.88□□□□□ -1.63
LRP6-203ENST00000538239 ST8SIA1Q92185 356 aa4.88□□□□□ -1.63
LRP6-203ENST00000538239 TAAR8Q969N4 342 aa4.88□□□□□ -1.63
LRP6-203ENST00000538239 ALG14Q96F25 216 aa4.88□□□□□ -1.63
LRP6-203ENST00000538239 SPIN2AQ99865 258 aa4.88□□□□□ -1.63
LRP6-203ENST00000538239 SPIN2BQ9BPZ2 258 aa4.88□□□□□ -1.63
LRP6-203ENST00000538239 THAP7Q9BT49 309 aaPredicted RBP4.88□□□□□ -1.63
LRP6-203ENST00000538239 LHX9Q9NQ69 397 aa4.88□□□□□ -1.63
LRP6-203ENST00000538239 ASH2LQ9UBL3 628 aa4.88□□□□□ -1.63
LRP6-203ENST00000538239 A0A087WZY1 265 aa4.88□□□□□ -1.63
LRP6-203ENST00000538239 ANKUB1A6NFN9 424 aa4.88□□□□□ -1.63
LRP6-203ENST00000538239 ARPC1BO15143 372 aaKnown RBP4.88□□□□□ -1.63
LRP6-203ENST00000538239 CNIH1O95406 144 aa4.88□□□□□ -1.63
LRP6-203ENST00000538239 DEFA4P12838 97 aa4.88□□□□□ -1.63
LRP6-203ENST00000538239 ABCD3P28288 659 aa4.88□□□□□ -1.63
LRP6-203ENST00000538239 PTGS2P35354 604 aa4.88□□□□□ -1.63
LRP6-203ENST00000538239 ZNF93P35789 620 aaPredicted RBP4.88□□□□□ -1.63
LRP6-203ENST00000538239 FABP6P51161 128 aa4.88□□□□□ -1.63
LRP6-203ENST00000538239 CLDN6P56747 220 aa4.88□□□□□ -1.63
LRP6-203ENST00000538239 RPL18Q07020 188 aaKnown RBP4.88□□□□□ -1.63
LRP6-203ENST00000538239 SLC9A3R2Q15599 337 aa4.88□□□□□ -1.63
LRP6-203ENST00000538239 PAN3Q58A45 887 aaKnown RBP4.88□□□□□ -1.63
LRP6-203ENST00000538239 THEM4Q5T1C6 240 aa4.88□□□□□ -1.63
LRP6-203ENST00000538239 STPG1Q5TH74 334 aa4.88□□□□□ -1.63
LRP6-203ENST00000538239 Q6ZTK2 550 aa4.88□□□□□ -1.63
LRP6-203ENST00000538239 FUNDC1Q8IVP5 155 aa4.88□□□□□ -1.63
LRP6-203ENST00000538239 OR56B1Q8NGI3 324 aa4.88□□□□□ -1.63
LRP6-203ENST00000538239 OR51E1Q8TCB6 317 aa4.88□□□□□ -1.63
LRP6-203ENST00000538239 REEP6Q96HR9 211 aa4.88□□□□□ -1.63
LRP6-203ENST00000538239 OR14A2Q96R54 314 aa4.88□□□□□ -1.63
LRP6-203ENST00000538239 ARL6Q9H0F7 186 aa4.88□□□□□ -1.63
LRP6-203ENST00000538239 GCM1Q9NP62 436 aa4.88□□□□□ -1.63
LRP6-203ENST00000538239 RNF212BA8MTL3 300 aa4.88□□□□□ -1.63
LRP6-203ENST00000538239 SIRPB1O00241 398 aa4.88□□□□□ -1.63
LRP6-203ENST00000538239 SPINT2O43291 252 aa4.88□□□□□ -1.63
LRP6-203ENST00000538239 SPRY3O43610 288 aa4.88□□□□□ -1.63
LRP6-203ENST00000538239 CTSVO60911 334 aa4.88□□□□□ -1.63
LRP6-203ENST00000538239 SLC22A5O76082 557 aa4.88□□□□□ -1.63
LRP6-203ENST00000538239 HOXB5P09067 269 aa4.88□□□□□ -1.63
LRP6-203ENST00000538239 HIST1H1CP16403 213 aaKnown RBP4.88□□□□□ -1.63
LRP6-203ENST00000538239 TMEM11P17152 192 aa4.88□□□□□ -1.63
LRP6-203ENST00000538239 GLRA1P23415 457 aa4.88□□□□□ -1.63
LRP6-203ENST00000538239 ADH6P28332 368 aa4.88□□□□□ -1.63
LRP6-203ENST00000538239 CA5AP35218 305 aa4.88□□□□□ -1.63
LRP6-203ENST00000538239 MAP2K6P52564 334 aa4.88□□□□□ -1.63
LRP6-203ENST00000538239 F2RL1P55085 397 aa4.88□□□□□ -1.63
LRP6-203ENST00000538239 RPL23AP62750 156 aaKnown RBP4.88□□□□□ -1.63
LRP6-203ENST00000538239 YBX1P67809 324 aaKnown RBP4.88□□□□□ -1.63
LRP6-203ENST00000538239 C16orf47Q6ZP98 133 aaPredicted RBP4.88□□□□□ -1.63
LRP6-203ENST00000538239 GALNT16Q8N428 558 aa4.88□□□□□ -1.63
LRP6-203ENST00000538239 KIAA1958Q8N8K9 716 aa4.88□□□□□ -1.63
LRP6-203ENST00000538239 FAM83FQ8NEG4 500 aaPredicted RBP4.88□□□□□ -1.63
LRP6-203ENST00000538239 OLIG1Q8TAK6 271 aa4.88□□□□□ -1.63
LRP6-203ENST00000538239 FNDC9Q8TBE3 224 aa4.88□□□□□ -1.63
LRP6-203ENST00000538239 TMEM106AQ96A25 262 aa4.88□□□□□ -1.63
LRP6-203ENST00000538239 SLAMF6Q96DU3 332 aa4.88□□□□□ -1.63
LRP6-203ENST00000538239 MRI1Q9BV20 369 aa4.88□□□□□ -1.63
LRP6-203ENST00000538239 SMIM3Q9BZL3 60 aa4.88□□□□□ -1.63
LRP6-203ENST00000538239 TINAGL1Q9GZM7 467 aaPredicted RBP4.88□□□□□ -1.63
LRP6-203ENST00000538239 RABL2AQ9UBK7 228 aaPredicted RBP4.88□□□□□ -1.63
LRP6-203ENST00000538239 PRDM4Q9UKN5 801 aa4.88□□□□□ -1.63
LRP6-203ENST00000538239 RABL2BQ9UNT1 228 aa4.88□□□□□ -1.63
LRP6-203ENST00000538239 TRIP11Q15643 1979 aa4.88□□□□□ -1.63
LRP6-203ENST00000538239 SCN1AP35498 2009 aa4.88□□□□□ -1.63
LRP6-203ENST00000538239 B8ZZF3 427 aa4.88□□□□□ -1.63
LRP6-203ENST00000538239 TNFRSF10AO00220 468 aa4.88□□□□□ -1.63
LRP6-203ENST00000538239 GFRA3O60609 400 aa4.88□□□□□ -1.63
LRP6-203ENST00000538239 ALPLP05186 524 aa4.88□□□□□ -1.63
LRP6-203ENST00000538239 DNASE1P24855 282 aa4.88□□□□□ -1.63
LRP6-203ENST00000538239 AGTR1P30556 359 aa4.88□□□□□ -1.63
LRP6-203ENST00000538239 CDAP32320 146 aa4.88□□□□□ -1.63
LRP6-203ENST00000538239 POLR2IP36954 125 aaKnown RBP4.88□□□□□ -1.63
LRP6-203ENST00000538239 ZNF83P51522 516 aa4.88□□□□□ -1.63
LRP6-203ENST00000538239 SOX8P57073 446 aa4.88□□□□□ -1.63
LRP6-203ENST00000538239 TAS2R20P59543 309 aa4.88□□□□□ -1.63
LRP6-203ENST00000538239 MEF2DQ14814 521 aa4.88□□□□□ -1.63
LRP6-203ENST00000538239 ACER2Q5QJU3 275 aa4.88□□□□□ -1.63
LRP6-203ENST00000538239 ZNF468Q5VIY5 522 aaPredicted RBP4.88□□□□□ -1.63
LRP6-203ENST00000538239 RBMS3Q6XE24 437 aaKnown RBP4.88□□□□□ -1.63
LRP6-203ENST00000538239 BTLAQ7Z6A9 289 aa4.88□□□□□ -1.63
LRP6-203ENST00000538239 WDR5BQ86VZ2 330 aa4.88□□□□□ -1.63
LRP6-203ENST00000538239 ZDHHC16Q969W1 377 aa4.88□□□□□ -1.63
LRP6-203ENST00000538239 FAM122AQ96E09 287 aa4.88□□□□□ -1.63
LRP6-203ENST00000538239 PRRT1Q99946 306 aa4.88□□□□□ -1.63
LRP6-203ENST00000538239 CCDC32Q9BV29 185 aa4.88□□□□□ -1.63
LRP6-203ENST00000538239 DUSP15Q9H1R2 295 aaPredicted RBP4.88□□□□□ -1.63
LRP6-203ENST00000538239 UBQLN3Q9H347 655 aa4.88□□□□□ -1.63
LRP6-203ENST00000538239 ZNF705EA8MWA4 302 aaPredicted RBP4.88□□□□□ -1.63
LRP6-203ENST00000538239 ZNF732B4DXR9 585 aa4.88□□□□□ -1.63
LRP6-203ENST00000538239 LYRM1O43325 122 aa4.88□□□□□ -1.63
LRP6-203ENST00000538239 VAMP5O95183 116 aa4.88□□□□□ -1.63
LRP6-203ENST00000538239 MT-CO2P00403 227 aa4.88□□□□□ -1.63
LRP6-203ENST00000538239 PMP2P02689 132 aa4.88□□□□□ -1.63
LRP6-203ENST00000538239 HOXB3P14651 431 aaPredicted RBP4.88□□□□□ -1.63
LRP6-203ENST00000538239 TAS2R46P59540 309 aa4.88□□□□□ -1.63
LRP6-203ENST00000538239 RPL11P62913 178 aaKnown RBP4.88□□□□□ -1.63
LRP6-203ENST00000538239 CATR1Q13166 79 aa4.88□□□□□ -1.63
LRP6-203ENST00000538239 CLN3Q13286 438 aa4.88□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms