RNA–Protein interactions for RNA: ENST00000538136.1

MSH6-209, Transcript of mutS homolog 6, humanhuman

TSL 2 BASIC

Gene MSH6, Length 4,055 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-209ENST00000538136 ST3GAL4Q11206 333 aa6.42□□□□□ -1.38
MSH6-209ENST00000538136 MALLQ13021 153 aa6.42□□□□□ -1.38
MSH6-209ENST00000538136 ZNF74Q16587 644 aa6.42□□□□□ -1.38
MSH6-209ENST00000538136 PABPC1L2AQ5JQF8 200 aa6.42□□□□□ -1.38
MSH6-209ENST00000538136 ZNF613Q6PF04 617 aa6.42□□□□□ -1.38
MSH6-209ENST00000538136 PAQR6Q6TCH4 344 aa6.42□□□□□ -1.38
MSH6-209ENST00000538136 PIGTQ969N2 578 aa6.42□□□□□ -1.38
MSH6-209ENST00000538136 ZNF184Q99676 751 aaPredicted RBP6.42□□□□□ -1.38
MSH6-209ENST00000538136 GPA33Q99795 319 aa6.42□□□□□ -1.38
MSH6-209ENST00000538136 COQ7Q99807 217 aa6.42□□□□□ -1.38
MSH6-209ENST00000538136 RHNO1Q9BSD3 238 aa6.42□□□□□ -1.38
MSH6-209ENST00000538136 GLTPQ9NZD2 209 aa6.42□□□□□ -1.38
MSH6-209ENST00000538136 PTTG3PQ9NZH4 202 aa6.42□□□□□ -1.38
MSH6-209ENST00000538136 PCDHGA9Q9Y5G4 932 aaKnown RBP6.42□□□□□ -1.38
MSH6-209ENST00000538136 PCNX3Q9H6A9 2034 aa6.42□□□□□ -1.38
MSH6-209ENST00000538136 A0A0B4J2E0 115 aa6.42□□□□□ -1.38
MSH6-209ENST00000538136 A0A1B0GX12 115 aa6.42□□□□□ -1.38
MSH6-209ENST00000538136 PPIHO43447 177 aaKnown RBP6.42□□□□□ -1.38
MSH6-209ENST00000538136 TP53P04637 393 aaPredicted RBP6.42□□□□□ -1.38
MSH6-209ENST00000538136 PTPN6P29350 595 aa6.42□□□□□ -1.38
MSH6-209ENST00000538136 DAPP51397 102 aa6.42□□□□□ -1.38
MSH6-209ENST00000538136 RPL27P61353 136 aaKnown RBP6.42□□□□□ -1.38
MSH6-209ENST00000538136 TRAP1Q12931 704 aaKnown RBP6.42□□□□□ -1.38
MSH6-209ENST00000538136 SLC36A2Q495M3 483 aa6.42□□□□□ -1.38
MSH6-209ENST00000538136 CRTC2Q53ET0 693 aaPredicted RBP6.42□□□□□ -1.38
MSH6-209ENST00000538136 PLA1AQ53H76 456 aa6.42□□□□□ -1.38
MSH6-209ENST00000538136 ATAD3CQ5T2N8 411 aa6.42□□□□□ -1.38
MSH6-209ENST00000538136 LIPKQ5VXJ0 399 aa6.42□□□□□ -1.38
MSH6-209ENST00000538136 SP5Q6BEB4 398 aaPredicted RBP6.42□□□□□ -1.38
MSH6-209ENST00000538136 ZNF787Q6DD87 383 aa6.42□□□□□ -1.38
MSH6-209ENST00000538136 OR2A2Q6IF42 318 aa6.42□□□□□ -1.38
MSH6-209ENST00000538136 SLC43A2Q8N370 569 aa6.42□□□□□ -1.38
MSH6-209ENST00000538136 ZNF843Q8N446 348 aa6.42□□□□□ -1.38
MSH6-209ENST00000538136 SLC37A3Q8NCC5 494 aa6.42□□□□□ -1.38
MSH6-209ENST00000538136 ZPLD1Q8TCW7 415 aa6.42□□□□□ -1.38
MSH6-209ENST00000538136 OXGR1Q96P68 337 aa6.42□□□□□ -1.38
MSH6-209ENST00000538136 INTS14Q96SY0 518 aa6.42□□□□□ -1.38
MSH6-209ENST00000538136 CHRNA10Q9GZZ6 450 aa6.42□□□□□ -1.38
MSH6-209ENST00000538136 NKIRAS2Q9NYR9 191 aa6.42□□□□□ -1.38
MSH6-209ENST00000538136 SEMA5BQ9P283 1151 aa6.42□□□□□ -1.38
MSH6-209ENST00000538136 SCOCQ9UIL1 159 aa6.42□□□□□ -1.38
MSH6-209ENST00000538136 EML5Q05BV3 1969 aa6.42□□□□□ -1.38
MSH6-209ENST00000538136 LOC100509620A0A075B734 347 aa6.41□□□□□ -1.38
MSH6-209ENST00000538136 ANXA2P2A6NMY6 339 aa6.41□□□□□ -1.38
MSH6-209ENST00000538136 NPIPB8E9PQR5 432 aa6.41□□□□□ -1.38
MSH6-209ENST00000538136 NGFRP08138 427 aa6.41□□□□□ -1.38
MSH6-209ENST00000538136 BMP4P12644 408 aa6.41□□□□□ -1.38
MSH6-209ENST00000538136 TXNL4AP83876 142 aaKnown RBP6.41□□□□□ -1.38
MSH6-209ENST00000538136 EDDM3AQ14507 147 aa6.41□□□□□ -1.38
MSH6-209ENST00000538136 TAB1Q15750 504 aa6.41□□□□□ -1.38
MSH6-209ENST00000538136 SOWAHCQ53LP3 525 aaPredicted RBP6.41□□□□□ -1.38
MSH6-209ENST00000538136 PGAP1Q75T13 922 aa6.41□□□□□ -1.38
MSH6-209ENST00000538136 SVOPLQ8N434 492 aa6.41□□□□□ -1.38
MSH6-209ENST00000538136 OR2Z1Q8NG97 314 aa6.41□□□□□ -1.38
MSH6-209ENST00000538136 C11orf40Q8WZ69 217 aa6.41□□□□□ -1.38
MSH6-209ENST00000538136 NEUROG1Q92886 237 aa6.41□□□□□ -1.38
MSH6-209ENST00000538136 C11orf24Q96F05 449 aaPredicted RBP6.41□□□□□ -1.38
MSH6-209ENST00000538136 Q96MT0 163 aa6.41□□□□□ -1.38
MSH6-209ENST00000538136 HCAR1Q9BXC0 346 aa6.41□□□□□ -1.38
MSH6-209ENST00000538136 CISD1Q9NZ45 108 aaKnown RBP6.41□□□□□ -1.38
MSH6-209ENST00000538136 B3GALT5Q9Y2C3 310 aa6.41□□□□□ -1.38
MSH6-209ENST00000538136 TPRKBQ9Y3C4 175 aa6.41□□□□□ -1.38
MSH6-209ENST00000538136 CDH10Q9Y6N8 788 aa6.41□□□□□ -1.38
MSH6-209ENST00000538136 UTP20O75691 2785 aaKnown RBP6.41□□□□□ -1.38
MSH6-209ENST00000538136 LIPT2A6NK58 231 aa6.41□□□□□ -1.38
MSH6-209ENST00000538136 P2RY10O00398 339 aa6.41□□□□□ -1.38
MSH6-209ENST00000538136 SMAD9O15198 467 aaKnown RBP6.41□□□□□ -1.38
MSH6-209ENST00000538136 EFNA2O43921 213 aa6.41□□□□□ -1.38
MSH6-209ENST00000538136 PRKYO43930 277 aa6.41□□□□□ -1.38
MSH6-209ENST00000538136 ACTL6AO96019 429 aa6.41□□□□□ -1.38
MSH6-209ENST00000538136 CD3EP07766 207 aa6.41□□□□□ -1.38
MSH6-209ENST00000538136 TMEM225BP0DP42 221 aa6.41□□□□□ -1.38
MSH6-209ENST00000538136 OSMP13725 252 aa6.41□□□□□ -1.38
MSH6-209ENST00000538136 GSTT1P30711 240 aa6.41□□□□□ -1.38
MSH6-209ENST00000538136 PCYT1AP49585 367 aa6.41□□□□□ -1.38
MSH6-209ENST00000538136 ZNF136P52737 540 aa6.41□□□□□ -1.38
MSH6-209ENST00000538136 PPA1Q15181 289 aa6.41□□□□□ -1.38
MSH6-209ENST00000538136 OR8B8Q15620 311 aa6.41□□□□□ -1.38
MSH6-209ENST00000538136 GSG1Q2KHT4 349 aa6.41□□□□□ -1.38
MSH6-209ENST00000538136 PGGHGQ32M88 737 aa6.41□□□□□ -1.38
MSH6-209ENST00000538136 ZNF322Q6U7Q0 402 aaPredicted RBP6.41□□□□□ -1.38
MSH6-209ENST00000538136 UTS2BQ765I0 119 aa6.41□□□□□ -1.38
MSH6-209ENST00000538136 SYT9Q86SS6 491 aa6.41□□□□□ -1.38
MSH6-209ENST00000538136 ARIH2OSQ8N7S6 290 aa6.41□□□□□ -1.38
MSH6-209ENST00000538136 RFKQ969G6 155 aa6.41□□□□□ -1.38
MSH6-209ENST00000538136 MCHR2Q969V1 340 aa6.41□□□□□ -1.38
MSH6-209ENST00000538136 ZNF524Q96C55 264 aa6.41□□□□□ -1.38
MSH6-209ENST00000538136 BCL2L10Q9HD36 194 aa6.41□□□□□ -1.38
MSH6-209ENST00000538136 HINT3Q9NQE9 182 aaKnown RBP6.41□□□□□ -1.38
MSH6-209ENST00000538136 ENAMQ9NRM1 1142 aa6.41□□□□□ -1.38
MSH6-209ENST00000538136 ENOPH1Q9UHY7 261 aa6.41□□□□□ -1.38
MSH6-209ENST00000538136 SPEF1Q9Y4P9 236 aa6.41□□□□□ -1.38
MSH6-209ENST00000538136 TRBV2A0A0J9YWF9 115 aa6.41□□□□□ -1.38
MSH6-209ENST00000538136 TMEM8BA6NDV4 472 aa6.41□□□□□ -1.38
MSH6-209ENST00000538136 CD8B2A6NJW9 211 aa6.41□□□□□ -1.38
MSH6-209ENST00000538136 FAM25AB3EWG3 89 aa6.41□□□□□ -1.38
MSH6-209ENST00000538136 FAM25CB3EWG5 89 aa6.41□□□□□ -1.38
MSH6-209ENST00000538136 FAM25GB3EWG6 89 aa6.41□□□□□ -1.38
MSH6-209ENST00000538136 GCM2O75603 506 aaPredicted RBP6.41□□□□□ -1.38
MSH6-209ENST00000538136 CD8BP10966 210 aa6.41□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 100.3 ms