RNA–Protein interactions for RNA: ENST00000537706.5

USP28-205, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 1 (best) BASIC

Gene USP28, Length 1,900 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-205ENST00000537706 ADH4P08319 380 aa7.63□□□□□ -1.19
USP28-205ENST00000537706 VSIG10L2P0DP72 767 aa7.63□□□□□ -1.19
USP28-205ENST00000537706 FAHP16930 419 aa7.63□□□□□ -1.19
USP28-205ENST00000537706 NCF2P19878 526 aaPredicted RBP7.63□□□□□ -1.19
USP28-205ENST00000537706 EPHA3P29320 983 aa7.63□□□□□ -1.19
USP28-205ENST00000537706 CCT3P49368 545 aaKnown RBP7.63□□□□□ -1.19
USP28-205ENST00000537706 MXRA7P84157 204 aa7.63□□□□□ -1.19
USP28-205ENST00000537706 KLF10Q13118 480 aa7.63□□□□□ -1.19
USP28-205ENST00000537706 SWT1Q5T5J6 900 aaKnown RBP7.63□□□□□ -1.19
USP28-205ENST00000537706 RPS27LQ71UM5 84 aaKnown RBP7.63□□□□□ -1.19
USP28-205ENST00000537706 C16orf62Q7Z3J2 963 aa7.63□□□□□ -1.19
USP28-205ENST00000537706 KLBQ86Z14 1044 aa7.63□□□□□ -1.19
USP28-205ENST00000537706 WFDC9Q8NEX5 89 aa7.63□□□□□ -1.19
USP28-205ENST00000537706 VPS37AQ8NEZ2 397 aa7.63□□□□□ -1.19
USP28-205ENST00000537706 VANGL1Q8TAA9 524 aaPredicted RBP7.63□□□□□ -1.19
USP28-205ENST00000537706 MAELQ96JY0 434 aaKnown RBP7.63□□□□□ -1.19
USP28-205ENST00000537706 CLPTM1LQ96KA5 538 aa7.63□□□□□ -1.19
USP28-205ENST00000537706 ZNF75AQ96N20 296 aa7.63□□□□□ -1.19
USP28-205ENST00000537706 OR52B2Q96RD2 323 aa7.63□□□□□ -1.19
USP28-205ENST00000537706 ZNF382Q96SR6 550 aa7.63□□□□□ -1.19
USP28-205ENST00000537706 PRPF18Q99633 342 aaKnown RBP7.63□□□□□ -1.19
USP28-205ENST00000537706 NUF2Q9BZD4 464 aa7.63□□□□□ -1.19
USP28-205ENST00000537706 GSTO2Q9H4Y5 243 aa7.63□□□□□ -1.19
USP28-205ENST00000537706 CNTD2Q9H8S5 307 aa7.63□□□□□ -1.19
USP28-205ENST00000537706 GAR1Q9NY12 217 aaKnown RBP7.63□□□□□ -1.19
USP28-205ENST00000537706 DYNC2H1Q8NCM8 4307 aaKnown RBP7.63□□□□□ -1.19
USP28-205ENST00000537706 IGHV1-69DA0A0B4J2H0 117 aa7.62□□□□□ -1.19
USP28-205ENST00000537706 PPP6CO00743 305 aa7.62□□□□□ -1.19
USP28-205ENST00000537706 UGT2B17O75795 530 aa7.62□□□□□ -1.19
USP28-205ENST00000537706 CIB2O75838 187 aa7.62□□□□□ -1.19
USP28-205ENST00000537706 IGHV1-69P01742 117 aa7.62□□□□□ -1.19
USP28-205ENST00000537706 LIPFP07098 398 aa7.62□□□□□ -1.19
USP28-205ENST00000537706 CD55P08174 381 aa7.62□□□□□ -1.19
USP28-205ENST00000537706 IMPDH1P20839 514 aa7.62□□□□□ -1.19
USP28-205ENST00000537706 FRKP42685 505 aaPredicted RBP7.62□□□□□ -1.19
USP28-205ENST00000537706 UCP2P55851 309 aa7.62□□□□□ -1.19
USP28-205ENST00000537706 NAA20P61599 178 aa7.62□□□□□ -1.19
USP28-205ENST00000537706 PLP2Q04941 152 aa7.62□□□□□ -1.19
USP28-205ENST00000537706 ZMYND11Q15326 602 aa7.62□□□□□ -1.19
USP28-205ENST00000537706 GSTA3Q16772 222 aa7.62□□□□□ -1.19
USP28-205ENST00000537706 LSM12Q3MHD2 195 aaKnown RBP7.62□□□□□ -1.19
USP28-205ENST00000537706 ANKRD26P1Q6NSI1 321 aa7.62□□□□□ -1.19
USP28-205ENST00000537706 NET1Q7Z628 596 aaPredicted RBP7.62□□□□□ -1.19
USP28-205ENST00000537706 DPPA2Q7Z7J5 298 aa7.62□□□□□ -1.19
USP28-205ENST00000537706 ZNF283Q8N7M2 679 aa7.62□□□□□ -1.19
USP28-205ENST00000537706 FAM71CQ8NEG0 241 aa7.62□□□□□ -1.19
USP28-205ENST00000537706 OR1J1Q8NGS3 322 aa7.62□□□□□ -1.19
USP28-205ENST00000537706 OR7D2Q96RA2 312 aa7.62□□□□□ -1.19
USP28-205ENST00000537706 PPA2Q9H2U2 334 aa7.62□□□□□ -1.19
USP28-205ENST00000537706 DCLRE1BQ9H816 532 aa7.62□□□□□ -1.19
USP28-205ENST00000537706 EXD2Q9NVH0 621 aa7.62□□□□□ -1.19
USP28-205ENST00000537706 NOTCH3Q9UM47 2321 aa7.62□□□□□ -1.19
USP28-205ENST00000537706 ARHGAP32A7KAX9 2087 aa7.62□□□□□ -1.19
USP28-205ENST00000537706 IQCMA0A1B0GVH7 501 aa7.62□□□□□ -1.19
USP28-205ENST00000537706 ZC3H12DA2A288 527 aaKnown RBP7.62□□□□□ -1.19
USP28-205ENST00000537706 PRAMEF27A3QJZ7 478 aa7.62□□□□□ -1.19
USP28-205ENST00000537706 TMEM233B4DJY2 109 aa7.62□□□□□ -1.19
USP28-205ENST00000537706 SDHDO14521 159 aa7.62□□□□□ -1.19
USP28-205ENST00000537706 SURF4O15260 269 aa7.62□□□□□ -1.19
USP28-205ENST00000537706 AKAP10O43572 662 aa7.62□□□□□ -1.19
USP28-205ENST00000537706 JTBO76095 146 aa7.62□□□□□ -1.19
USP28-205ENST00000537706 SUPT7LO94864 414 aa7.62□□□□□ -1.19
USP28-205ENST00000537706 PF4P02776 101 aa7.62□□□□□ -1.19
USP28-205ENST00000537706 FBP1P09467 338 aa7.62□□□□□ -1.19
USP28-205ENST00000537706 COX4I1P13073 169 aa7.62□□□□□ -1.19
USP28-205ENST00000537706 B4GALT1P15291 398 aa7.62□□□□□ -1.19
USP28-205ENST00000537706 CFHR2P36980 270 aa7.62□□□□□ -1.19
USP28-205ENST00000537706 PITPNBP48739 271 aa7.62□□□□□ -1.19
USP28-205ENST00000537706 HTR6P50406 440 aa7.62□□□□□ -1.19
USP28-205ENST00000537706 ANXA11P50995 505 aaKnown RBP7.62□□□□□ -1.19
USP28-205ENST00000537706 EFNB2P52799 333 aa7.62□□□□□ -1.19
USP28-205ENST00000537706 ERVS71-1P61550 626 aa7.62□□□□□ -1.19
USP28-205ENST00000537706 KPNB1Q14974 876 aaKnown RBP7.62□□□□□ -1.19
USP28-205ENST00000537706 ZNF678Q5SXM1 525 aa7.62□□□□□ -1.19
USP28-205ENST00000537706 ZBTB37Q5TC79 503 aa7.62□□□□□ -1.19
USP28-205ENST00000537706 METTL11BQ5VVY1 283 aa7.62□□□□□ -1.19
USP28-205ENST00000537706 SLC27A4Q6P1M0 643 aa7.62□□□□□ -1.19
USP28-205ENST00000537706 ZER1Q7Z7L7 766 aa7.62□□□□□ -1.19
USP28-205ENST00000537706 PAPD5Q8NDF8 572 aaKnown RBP7.62□□□□□ -1.19
USP28-205ENST00000537706 SDR9C7Q8NEX9 313 aa7.62□□□□□ -1.19
USP28-205ENST00000537706 SFXN5Q8TD22 340 aa7.62□□□□□ -1.19
USP28-205ENST00000537706 GEMIN6Q8WXD5 167 aaKnown RBP7.62□□□□□ -1.19
USP28-205ENST00000537706 OXGR1Q96P68 337 aa7.62□□□□□ -1.19
USP28-205ENST00000537706 C1QTNF3Q9BXJ4 246 aa7.62□□□□□ -1.19
USP28-205ENST00000537706 WDR55Q9H6Y2 383 aaPredicted RBP7.62□□□□□ -1.19
USP28-205ENST00000537706 MEAF6Q9HAF1 191 aa7.62□□□□□ -1.19
USP28-205ENST00000537706 EIF3KQ9UBQ5 218 aaKnown RBP7.62□□□□□ -1.19
USP28-205ENST00000537706 CLN8Q9UBY8 286 aa7.62□□□□□ -1.19
USP28-205ENST00000537706 MKLN1Q9UL63 735 aa7.62□□□□□ -1.19
USP28-205ENST00000537706 KCNE3Q9Y6H6 103 aa7.62□□□□□ -1.19
USP28-205ENST00000537706 A0A0U1RQK1 487 aa7.61□□□□□ -1.19
USP28-205ENST00000537706 CENPVL1A0A0U1RR11 272 aa7.61□□□□□ -1.19
USP28-205ENST00000537706 CENPVL3A0A0U1RRI6 287 aa7.61□□□□□ -1.19
USP28-205ENST00000537706 A8MVM7 634 aa7.61□□□□□ -1.19
USP28-205ENST00000537706 FARS2O95363 451 aaKnown RBP7.61□□□□□ -1.19
USP28-205ENST00000537706 AHSA1O95433 338 aa7.61□□□□□ -1.19
USP28-205ENST00000537706 SNAP29O95721 258 aa7.61□□□□□ -1.19
USP28-205ENST00000537706 CLIC3O95833 236 aa7.61□□□□□ -1.19
USP28-205ENST00000537706 PF4V1P10720 104 aa7.61□□□□□ -1.19
USP28-205ENST00000537706 KIR2DS4P43632 304 aa7.61□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 876.2 ms