RNA–Protein interactions for RNA: ENST00000537490.1

USP28-203, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 5

Gene USP28, Length 567 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-203ENST00000537490 RGS9O75916 674 aaPredicted RBP7.2□□□□□ -1.26
USP28-203ENST00000537490 OR5F1O95221 314 aa7.2□□□□□ -1.26
USP28-203ENST00000537490 IGHV3-13P01766 116 aa7.2□□□□□ -1.26
USP28-203ENST00000537490 TSPAN19P0C672 248 aa7.2□□□□□ -1.26
USP28-203ENST00000537490 ZNF32P17041 273 aa7.2□□□□□ -1.26
USP28-203ENST00000537490 FUT4P22083 530 aa7.2□□□□□ -1.26
USP28-203ENST00000537490 CCNOP22674 350 aa7.2□□□□□ -1.26
USP28-203ENST00000537490 APLNRP35414 380 aa7.2□□□□□ -1.26
USP28-203ENST00000537490 WNT5AP41221 380 aa7.2□□□□□ -1.26
USP28-203ENST00000537490 RBM34P42696 430 aaKnown RBP7.2□□□□□ -1.26
USP28-203ENST00000537490 CRYBB2P43320 205 aa7.2□□□□□ -1.26
USP28-203ENST00000537490 OR1E2P47887 323 aa7.2□□□□□ -1.26
USP28-203ENST00000537490 DAP3P51398 398 aaKnown RBP7.2□□□□□ -1.26
USP28-203ENST00000537490 TAS2R41P59536 307 aa7.2□□□□□ -1.26
USP28-203ENST00000537490 MRPS34P82930 218 aaKnown RBP7.2□□□□□ -1.26
USP28-203ENST00000537490 HSF2Q03933 536 aa7.2□□□□□ -1.26
USP28-203ENST00000537490 GLO1Q04760 184 aa7.2□□□□□ -1.26
USP28-203ENST00000537490 FMODQ06828 376 aa7.2□□□□□ -1.26
USP28-203ENST00000537490 CYLC2Q14093 348 aaPredicted RBP7.2□□□□□ -1.26
USP28-203ENST00000537490 SGCAQ16586 387 aa7.2□□□□□ -1.26
USP28-203ENST00000537490 TSTQ16762 297 aaKnown RBP7.2□□□□□ -1.26
USP28-203ENST00000537490 PCGF3Q3KNV8 242 aa7.2□□□□□ -1.26
USP28-203ENST00000537490 TMEM255AQ5JRV8 349 aa7.2□□□□□ -1.26
USP28-203ENST00000537490 THEM4Q5T1C6 240 aa7.2□□□□□ -1.26
USP28-203ENST00000537490 C10orf128Q5T292 105 aa7.2□□□□□ -1.26
USP28-203ENST00000537490 ACSM5Q6NUN0 579 aa7.2□□□□□ -1.26
USP28-203ENST00000537490 SLC25A47Q6Q0C1 308 aa7.2□□□□□ -1.26
USP28-203ENST00000537490 C12orf54Q6X4T0 127 aa7.2□□□□□ -1.26
USP28-203ENST00000537490 USP51Q70EK9 711 aa7.2□□□□□ -1.26
USP28-203ENST00000537490 ZNF101Q8IZC7 436 aa7.2□□□□□ -1.26
USP28-203ENST00000537490 SEMA6DQ8NFY4 1073 aa7.2□□□□□ -1.26
USP28-203ENST00000537490 AKR7LQ8NHP1 331 aa7.2□□□□□ -1.26
USP28-203ENST00000537490 SNX33Q8WV41 574 aa7.2□□□□□ -1.26
USP28-203ENST00000537490 TMEM239Q8WW34 195 aa7.2□□□□□ -1.26
USP28-203ENST00000537490 RASSF5Q8WWW0 418 aa7.2□□□□□ -1.26
USP28-203ENST00000537490 LIPHQ8WWY8 451 aa7.2□□□□□ -1.26
USP28-203ENST00000537490 NSMAFQ92636 917 aa7.2□□□□□ -1.26
USP28-203ENST00000537490 NABP1Q96AH0 204 aa7.2□□□□□ -1.26
USP28-203ENST00000537490 LRRC58Q96CX6 371 aa7.2□□□□□ -1.26
USP28-203ENST00000537490 POM121L2Q96KW2 1035 aa7.2□□□□□ -1.26
USP28-203ENST00000537490 ZNF583Q96ND8 569 aa7.2□□□□□ -1.26
USP28-203ENST00000537490 ECSITQ9BQ95 431 aa7.2□□□□□ -1.26
USP28-203ENST00000537490 LRMDAQ9H2I8 198 aa7.2□□□□□ -1.26
USP28-203ENST00000537490 ZNF665Q9H7R5 613 aa7.2□□□□□ -1.26
USP28-203ENST00000537490 SIAEQ9HAT2 523 aa7.2□□□□□ -1.26
USP28-203ENST00000537490 G6PC2Q9NQR9 355 aa7.2□□□□□ -1.26
USP28-203ENST00000537490 BAG5Q9UL15 447 aa7.2□□□□□ -1.26
USP28-203ENST00000537490 WIPI2Q9Y4P8 454 aa7.2□□□□□ -1.26
USP28-203ENST00000537490 NBEAL1Q6ZS30 2694 aa7.19□□□□□ -1.26
USP28-203ENST00000537490 LOC105371242A0A075B767 164 aa7.19□□□□□ -1.26
USP28-203ENST00000537490 TRAV20A0A0B4J274 112 aa7.19□□□□□ -1.26
USP28-203ENST00000537490 HMGB1P1B2RPK0 211 aaPredicted RBP7.19□□□□□ -1.26
USP28-203ENST00000537490 TPD52L2O43399 206 aaKnown RBP7.19□□□□□ -1.26
USP28-203ENST00000537490 SPRY3O43610 288 aa7.19□□□□□ -1.26
USP28-203ENST00000537490 PLPP2O43688 288 aa7.19□□□□□ -1.26
USP28-203ENST00000537490 PIP5K1CO60331 668 aa7.19□□□□□ -1.26
USP28-203ENST00000537490 MPZL1O95297 269 aa7.19□□□□□ -1.26
USP28-203ENST00000537490 IGF2P01344 180 aa7.19□□□□□ -1.26
USP28-203ENST00000537490 IGHV1-46P01743 117 aa7.19□□□□□ -1.26
USP28-203ENST00000537490 ANPEPP15144 967 aa7.19□□□□□ -1.26
USP28-203ENST00000537490 MAKP20794 623 aa7.19□□□□□ -1.26
USP28-203ENST00000537490 DRD4P21917 467 aa7.19□□□□□ -1.26
USP28-203ENST00000537490 STOMP27105 288 aa7.19□□□□□ -1.26
USP28-203ENST00000537490 CFPP27918 469 aa7.19□□□□□ -1.26
USP28-203ENST00000537490 MPV17P39210 176 aa7.19□□□□□ -1.26
USP28-203ENST00000537490 ZNF81P51508 661 aa7.19□□□□□ -1.26
USP28-203ENST00000537490 MMP15P51511 669 aa7.19□□□□□ -1.26
USP28-203ENST00000537490 ERVK-25P63136 954 aa7.19□□□□□ -1.26
USP28-203ENST00000537490 PSG4Q00888 419 aa7.19□□□□□ -1.26
USP28-203ENST00000537490 TEKQ02763 1124 aa7.19□□□□□ -1.26
USP28-203ENST00000537490 HNRNPA0Q13151 305 aaKnown RBP7.19□□□□□ -1.26
USP28-203ENST00000537490 MOGQ16653 247 aa7.19□□□□□ -1.26
USP28-203ENST00000537490 ZNF718Q3SXZ3 478 aa7.19□□□□□ -1.26
USP28-203ENST00000537490 MMEL1Q495T6 779 aa7.19□□□□□ -1.26
USP28-203ENST00000537490 SPRNQ5BIV9 151 aa7.19□□□□□ -1.26
USP28-203ENST00000537490 SPATA46Q5T0L3 261 aa7.19□□□□□ -1.26
USP28-203ENST00000537490 METTL21CQ5VZV1 264 aa7.19□□□□□ -1.26
USP28-203ENST00000537490 SHQ1Q6PI26 577 aaKnown RBP7.19□□□□□ -1.26
USP28-203ENST00000537490 CLDN22Q8N7P3 220 aa7.19□□□□□ -1.26
USP28-203ENST00000537490 LRRC75AQ8NAA5 344 aa7.19□□□□□ -1.26
USP28-203ENST00000537490 OR8J3Q8NGG0 315 aa7.19□□□□□ -1.26
USP28-203ENST00000537490 SLC25A40Q8TBP6 338 aa7.19□□□□□ -1.26
USP28-203ENST00000537490 C10orf82Q8WW14 230 aa7.19□□□□□ -1.26
USP28-203ENST00000537490 MARS2Q96GW9 593 aaKnown RBP7.19□□□□□ -1.26
USP28-203ENST00000537490 TMEM120AQ9BXJ8 343 aa7.19□□□□□ -1.26
USP28-203ENST00000537490 TMPRSS13Q9BYE2 586 aa7.19□□□□□ -1.26
USP28-203ENST00000537490 KCNN2Q9H2S1 579 aa7.19□□□□□ -1.26
USP28-203ENST00000537490 TXNIPQ9H3M7 391 aa7.19□□□□□ -1.26
USP28-203ENST00000537490 CCNB1IP1Q9NPC3 277 aa7.19□□□□□ -1.26
USP28-203ENST00000537490 DECR2Q9NUI1 292 aa7.19□□□□□ -1.26
USP28-203ENST00000537490 MED31Q9Y3C7 131 aa7.19□□□□□ -1.26
USP28-203ENST00000537490 C5orf49A4QMS7 147 aa7.18□□□□□ -1.26
USP28-203ENST00000537490 ZSCAN5BA6NJL1 495 aa7.18□□□□□ -1.26
USP28-203ENST00000537490 MRASO14807 208 aa7.18□□□□□ -1.26
USP28-203ENST00000537490 PNPP00491 289 aa7.18□□□□□ -1.26
USP28-203ENST00000537490 NGFP01138 241 aa7.18□□□□□ -1.26
USP28-203ENST00000537490 IGHV2-5P01817 119 aa7.18□□□□□ -1.26
USP28-203ENST00000537490 VIMP08670 466 aaKnown RBP7.18□□□□□ -1.26
USP28-203ENST00000537490 THRBP10828 461 aa7.18□□□□□ -1.26
USP28-203ENST00000537490 IFI30P13284 250 aa7.18□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms