RNA–Protein interactions for RNA: ENST00000537408.1

CLSTN3-207, Transcript of calsyntenin 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CLSTN3, Length 4,296 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-207ENST00000537408 TVP23AA6NH52 213 aa9.93□□□□□ -0.82
CLSTN3-207ENST00000537408 GPR37L1O60883 481 aa9.93□□□□□ -0.82
CLSTN3-207ENST00000537408 TSPAN15O95858 294 aa9.93□□□□□ -0.82
CLSTN3-207ENST00000537408 PYCR1P32322 319 aa9.93□□□□□ -0.82
CLSTN3-207ENST00000537408 NFATC2Q13469 925 aa9.93□□□□□ -0.82
CLSTN3-207ENST00000537408 CST6Q15828 149 aa9.93□□□□□ -0.82
CLSTN3-207ENST00000537408 PGGHGQ32M88 737 aa9.93□□□□□ -0.82
CLSTN3-207ENST00000537408 ZNF574Q6ZN55 896 aaPredicted RBP9.93□□□□□ -0.82
CLSTN3-207ENST00000537408 GALNT16Q8N428 558 aa9.93□□□□□ -0.82
CLSTN3-207ENST00000537408 OR2T33Q8NG76 320 aa9.93□□□□□ -0.82
CLSTN3-207ENST00000537408 OR14K1Q8NGZ2 314 aa9.93□□□□□ -0.82
CLSTN3-207ENST00000537408 TMEM19Q96HH6 336 aa9.93□□□□□ -0.82
CLSTN3-207ENST00000537408 SLC22A12Q96S37 553 aa9.93□□□□□ -0.82
CLSTN3-207ENST00000537408 KCNJ16Q9NPI9 418 aa9.93□□□□□ -0.82
CLSTN3-207ENST00000537408 OR2S2Q9NQN1 319 aa9.93□□□□□ -0.82
CLSTN3-207ENST00000537408 GPATCH2Q9NW75 528 aa9.93□□□□□ -0.82
CLSTN3-207ENST00000537408 KCNE5Q9UJ90 142 aa9.93□□□□□ -0.82
CLSTN3-207ENST00000537408 A0A1W2PPE2 198 aa9.92□□□□□ -0.82
CLSTN3-207ENST00000537408 C5orf51A6NDU8 294 aa9.92□□□□□ -0.82
CLSTN3-207ENST00000537408 PGAM2P15259 253 aa9.92□□□□□ -0.82
CLSTN3-207ENST00000537408 ATP1B3P54709 279 aa9.92□□□□□ -0.82
CLSTN3-207ENST00000537408 ZNF805Q5CZA5 627 aa9.92□□□□□ -0.82
CLSTN3-207ENST00000537408 ZNF311Q5JNZ3 666 aa9.92□□□□□ -0.82
CLSTN3-207ENST00000537408 TNFAIP8L2Q6P589 184 aaPredicted RBP9.92□□□□□ -0.82
CLSTN3-207ENST00000537408 SMIM15Q7Z3B0 74 aa9.92□□□□□ -0.82
CLSTN3-207ENST00000537408 JAGN1Q8N5M9 183 aa9.92□□□□□ -0.82
CLSTN3-207ENST00000537408 SIRT6Q8N6T7 355 aa9.92□□□□□ -0.82
CLSTN3-207ENST00000537408 ZNF615Q8N8J6 731 aa9.92□□□□□ -0.82
CLSTN3-207ENST00000537408 SECTM1Q8WVN6 248 aa9.92□□□□□ -0.82
CLSTN3-207ENST00000537408 RLN3Q8WXF3 142 aa9.92□□□□□ -0.82
CLSTN3-207ENST00000537408 MYEOVQ96EZ4 313 aa9.92□□□□□ -0.82
CLSTN3-207ENST00000537408 ATG10Q9H0Y0 220 aa9.92□□□□□ -0.82
CLSTN3-207ENST00000537408 IL20RAQ9UHF4 553 aa9.92□□□□□ -0.82
CLSTN3-207ENST00000537408 V9GYS6 101 aa9.92□□□□□ -0.82
CLSTN3-207ENST00000537408 ANKRD36A6QL64 1941 aa9.92□□□□□ -0.82
CLSTN3-207ENST00000537408 KCNE1BA0A087WTH5 132 aa9.92□□□□□ -0.82
CLSTN3-207ENST00000537408 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa9.92□□□□□ -0.82
CLSTN3-207ENST00000537408 K7ERQ8 282 aa9.92□□□□□ -0.82
CLSTN3-207ENST00000537408 EIF1AYO14602 144 aaKnown RBP9.92□□□□□ -0.82
CLSTN3-207ENST00000537408 CLDN7O95471 211 aa9.92□□□□□ -0.82
CLSTN3-207ENST00000537408 CD5P06127 495 aa9.92□□□□□ -0.82
CLSTN3-207ENST00000537408 EIF1AXP47813 144 aaKnown RBP9.92□□□□□ -0.82
CLSTN3-207ENST00000537408 TLE4Q04727 773 aa9.92□□□□□ -0.82
CLSTN3-207ENST00000537408 OR2T2Q6IF00 324 aa9.92□□□□□ -0.82
CLSTN3-207ENST00000537408 SYT13Q7L8C5 426 aa9.92□□□□□ -0.82
CLSTN3-207ENST00000537408 THNSL2Q86YJ6 484 aa9.92□□□□□ -0.82
CLSTN3-207ENST00000537408 TMEFF1Q8IYR6 380 aa9.92□□□□□ -0.82
CLSTN3-207ENST00000537408 APCDD1Q8J025 514 aa9.92□□□□□ -0.82
CLSTN3-207ENST00000537408 OR52L1Q8NGH7 329 aa9.92□□□□□ -0.82
CLSTN3-207ENST00000537408 ROBO4Q8WZ75 1007 aa9.92□□□□□ -0.82
CLSTN3-207ENST00000537408 C4orf36Q96KX1 117 aa9.92□□□□□ -0.82
CLSTN3-207ENST00000537408 SLC25A21Q9BQT8 299 aaPredicted RBP9.92□□□□□ -0.82
CLSTN3-207ENST00000537408 EIF5A2Q9GZV4 153 aaKnown RBP9.92□□□□□ -0.82
CLSTN3-207ENST00000537408 MOKQ9UQ07 419 aa9.92□□□□□ -0.82
CLSTN3-207ENST00000537408 GAB2Q9UQC2 676 aa9.92□□□□□ -0.82
CLSTN3-207ENST00000537408 CHD5Q8TDI0 1954 aa9.92□□□□□ -0.82
CLSTN3-207ENST00000537408 UMAD1C9J7I0 102 aa9.92□□□□□ -0.82
CLSTN3-207ENST00000537408 SOCS6O14544 535 aa9.92□□□□□ -0.82
CLSTN3-207ENST00000537408 SURF4O15260 269 aa9.92□□□□□ -0.82
CLSTN3-207ENST00000537408 CRHP06850 196 aa9.92□□□□□ -0.82
CLSTN3-207ENST00000537408 QDPRP09417 244 aa9.92□□□□□ -0.82
CLSTN3-207ENST00000537408 CDK2P24941 298 aa9.92□□□□□ -0.82
CLSTN3-207ENST00000537408 TIA1P31483 386 aaKnown RBP eCLIP9.92□□□□□ -0.82
CLSTN3-207ENST00000537408 IGFALSP35858 605 aa9.92□□□□□ -0.82
CLSTN3-207ENST00000537408 MEPCEQ7L2J0 689 aaKnown RBP9.92□□□□□ -0.82
CLSTN3-207ENST00000537408 MRGPREQ86SM8 312 aa9.92□□□□□ -0.82
CLSTN3-207ENST00000537408 OR6T1Q8NGN1 323 aa9.92□□□□□ -0.82
CLSTN3-207ENST00000537408 ASB17Q8WXJ9 295 aa9.92□□□□□ -0.82
CLSTN3-207ENST00000537408 GALNT14Q96FL9 552 aa9.92□□□□□ -0.82
CLSTN3-207ENST00000537408 OR5B2Q96R09 309 aa9.92□□□□□ -0.82
CLSTN3-207ENST00000537408 SELENOIQ9C0D9 397 aa9.92□□□□□ -0.82
CLSTN3-207ENST00000537408 IL21RQ9HBE5 538 aa9.92□□□□□ -0.82
CLSTN3-207ENST00000537408 CAPN10Q9HC96 672 aa9.92□□□□□ -0.82
CLSTN3-207ENST00000537408 ETV7Q9Y603 341 aa9.92□□□□□ -0.82
CLSTN3-207ENST00000537408 A0A1W2PP55 124 aa9.91□□□□□ -0.82
CLSTN3-207ENST00000537408 ADAP1O75689 374 aa9.91□□□□□ -0.82
CLSTN3-207ENST00000537408 CHATP28329 748 aa9.91□□□□□ -0.82
CLSTN3-207ENST00000537408 IL2RGP31785 369 aa9.91□□□□□ -0.82
CLSTN3-207ENST00000537408 TAS2R19P59542 299 aa9.91□□□□□ -0.82
CLSTN3-207ENST00000537408 ACTC1P68032 377 aa9.91□□□□□ -0.82
CLSTN3-207ENST00000537408 ACTA1P68133 377 aa9.91□□□□□ -0.82
CLSTN3-207ENST00000537408 PNLIPRP3Q17RR3 467 aa9.91□□□□□ -0.82
CLSTN3-207ENST00000537408 DMRTA1Q5VZB9 504 aa9.91□□□□□ -0.82
CLSTN3-207ENST00000537408 SYT9Q86SS6 491 aa9.91□□□□□ -0.82
CLSTN3-207ENST00000537408 RBM45Q8IUH3 476 aaKnown RBP9.91□□□□□ -0.82
CLSTN3-207ENST00000537408 HIST3H2BBQ8N257 126 aa9.91□□□□□ -0.82
CLSTN3-207ENST00000537408 TMEM99Q8N816 258 aa9.91□□□□□ -0.82
CLSTN3-207ENST00000537408 RHBDD1Q8TEB9 315 aa9.91□□□□□ -0.82
CLSTN3-207ENST00000537408 PHYHIPQ92561 330 aa9.91□□□□□ -0.82
CLSTN3-207ENST00000537408 PRRC1Q96M27 445 aa9.91□□□□□ -0.82
CLSTN3-207ENST00000537408 PRDM7Q9NQW5 492 aa9.91□□□□□ -0.82
CLSTN3-207ENST00000537408 FLVCR1Q9Y5Y0 555 aa9.91□□□□□ -0.82
CLSTN3-207ENST00000537408 SCN5AQ14524 2016 aa9.91□□□□□ -0.82
CLSTN3-207ENST00000537408 TEX13DA0A0J9YY54 714 aaPredicted RBP9.91□□□□□ -0.82
CLSTN3-207ENST00000537408 TMEM238LA0A1B0GVL6 79 aa9.91□□□□□ -0.82
CLSTN3-207ENST00000537408 A0A1W2PPQ1 181 aa9.91□□□□□ -0.82
CLSTN3-207ENST00000537408 F8VVB4 439 aa9.91□□□□□ -0.82
CLSTN3-207ENST00000537408 F8VWA3 439 aa9.91□□□□□ -0.82
CLSTN3-207ENST00000537408 PCCBP05166 539 aa9.91□□□□□ -0.82
CLSTN3-207ENST00000537408 SLC35G4P0C7Q5 338 aa9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms