RNA–Protein interactions for RNA: ENST00000535527.5

CHFR-210, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 3

Gene CHFR, Length 746 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-210ENST00000535527 TBC1D23Q9NUY8 699 aa11.41□□□□□ -0.58
CHFR-210ENST00000535527 VSX1Q9NZR4 365 aaPredicted RBP11.41□□□□□ -0.58
CHFR-210ENST00000535527 ST6GALNAC2Q9UJ37 374 aa11.41□□□□□ -0.58
CHFR-210ENST00000535527 CHD3Q12873 2000 aaKnown RBP11.4□□□□□ -0.58
CHFR-210ENST00000535527 IGHV1-18A0A0C4DH31 117 aa11.4□□□□□ -0.58
CHFR-210ENST00000535527 OR6C65A6NJZ3 312 aa11.4□□□□□ -0.58
CHFR-210ENST00000535527 CENPBD1B2RD01 187 aa11.4□□□□□ -0.58
CHFR-210ENST00000535527 MGRN1O60291 552 aa11.4□□□□□ -0.58
CHFR-210ENST00000535527 MPZL1O95297 269 aa11.4□□□□□ -0.58
CHFR-210ENST00000535527 MMP7P09237 267 aaPredicted RBP11.4□□□□□ -0.58
CHFR-210ENST00000535527 GAAP10253 952 aa11.4□□□□□ -0.58
CHFR-210ENST00000535527 CLUP10909 449 aa11.4□□□□□ -0.58
CHFR-210ENST00000535527 APEHP13798 732 aaKnown RBP11.4□□□□□ -0.58
CHFR-210ENST00000535527 PPP3CBP16298 524 aa11.4□□□□□ -0.58
CHFR-210ENST00000535527 POLR2IP36954 125 aaKnown RBP11.4□□□□□ -0.58
CHFR-210ENST00000535527 PPP2R2BQ00005 443 aa11.4□□□□□ -0.58
CHFR-210ENST00000535527 ENDOGQ14249 297 aaKnown RBP11.4□□□□□ -0.58
CHFR-210ENST00000535527 GK3PQ14409 553 aa11.4□□□□□ -0.58
CHFR-210ENST00000535527 TAF11Q15544 211 aa11.4□□□□□ -0.58
CHFR-210ENST00000535527 PGGHGQ32M88 737 aa11.4□□□□□ -0.58
CHFR-210ENST00000535527 NCMAPQ5T1S8 102 aa11.4□□□□□ -0.58
CHFR-210ENST00000535527 KDM4DQ6B0I6 523 aa11.4□□□□□ -0.58
CHFR-210ENST00000535527 ANKRD16Q6P6B7 361 aa11.4□□□□□ -0.58
CHFR-210ENST00000535527 MDP1Q86V88 176 aa11.4□□□□□ -0.58
CHFR-210ENST00000535527 CDC20BQ86Y33 519 aa11.4□□□□□ -0.58
CHFR-210ENST00000535527 LNX2Q8N448 690 aa11.4□□□□□ -0.58
CHFR-210ENST00000535527 C17orf78Q8N4C9 275 aa11.4□□□□□ -0.58
CHFR-210ENST00000535527 LINC00471Q8N535 108 aa11.4□□□□□ -0.58
CHFR-210ENST00000535527 NPEPL1Q8NDH3 523 aa11.4□□□□□ -0.58
CHFR-210ENST00000535527 ICA1LQ8NDH6 482 aa11.4□□□□□ -0.58
CHFR-210ENST00000535527 MS4A3Q96HJ5 214 aa11.4□□□□□ -0.58
CHFR-210ENST00000535527 TSSK6Q9BXA6 273 aa11.4□□□□□ -0.58
CHFR-210ENST00000535527 HDHD5Q9BXW7 423 aa11.4□□□□□ -0.58
CHFR-210ENST00000535527 NUAK2Q9H093 628 aa11.4□□□□□ -0.58
CHFR-210ENST00000535527 PLEKHF2Q9H8W4 249 aa11.4□□□□□ -0.58
CHFR-210ENST00000535527 EMC7Q9NPA0 242 aa11.4□□□□□ -0.58
CHFR-210ENST00000535527 KRCC1Q9NPI7 259 aaPredicted RBP11.4□□□□□ -0.58
CHFR-210ENST00000535527 GRHPRQ9UBQ7 328 aa11.4□□□□□ -0.58
CHFR-210ENST00000535527 NDRG3Q9UGV2 375 aa11.4□□□□□ -0.58
CHFR-210ENST00000535527 NSD1Q96L73 2696 aaPredicted RBP11.4□□□□□ -0.59
CHFR-210ENST00000535527 ARFGEF3Q5TH69 2177 aa11.4□□□□□ -0.59
CHFR-210ENST00000535527 FAM171A2A8MVW0 826 aa11.39□□□□□ -0.59
CHFR-210ENST00000535527 SHISA9B4DS77 424 aa11.39□□□□□ -0.59
CHFR-210ENST00000535527 WNT11O96014 354 aa11.39□□□□□ -0.59
CHFR-210ENST00000535527 IGLV1-44P01699 117 aa11.39□□□□□ -0.59
CHFR-210ENST00000535527 ZNF23P17027 643 aa11.39□□□□□ -0.59
CHFR-210ENST00000535527 DNASE1P24855 282 aa11.39□□□□□ -0.59
CHFR-210ENST00000535527 CALCRP30988 508 aa11.39□□□□□ -0.59
CHFR-210ENST00000535527 IFNGR2P38484 337 aa11.39□□□□□ -0.59
CHFR-210ENST00000535527 SH3BGRP55822 239 aaPredicted RBP11.39□□□□□ -0.59
CHFR-210ENST00000535527 KHDRBS1Q07666 443 aaKnown RBP eCLIP11.39□□□□□ -0.59
CHFR-210ENST00000535527 CRMP1Q14194 572 aa11.39□□□□□ -0.59
CHFR-210ENST00000535527 MEP1BQ16820 701 aa11.39□□□□□ -0.59
CHFR-210ENST00000535527 GPR139Q6DWJ6 353 aa11.39□□□□□ -0.59
CHFR-210ENST00000535527 ADAM5Q6NVV9 412 aa11.39□□□□□ -0.59
CHFR-210ENST00000535527 LEG1Q6P5S2 330 aa11.39□□□□□ -0.59
CHFR-210ENST00000535527 OR6V1Q8N148 313 aa11.39□□□□□ -0.59
CHFR-210ENST00000535527 SLC22A24Q8N4F4 322 aa11.39□□□□□ -0.59
CHFR-210ENST00000535527 SLC37A3Q8NCC5 494 aa11.39□□□□□ -0.59
CHFR-210ENST00000535527 OR9Q1Q8NGQ5 310 aa11.39□□□□□ -0.59
CHFR-210ENST00000535527 SPATA3Q8NHX4 192 aa11.39□□□□□ -0.59
CHFR-210ENST00000535527 NANOS1Q8WY41 292 aaKnown RBP11.39□□□□□ -0.59
CHFR-210ENST00000535527 HSD17B8Q92506 261 aa11.39□□□□□ -0.59
CHFR-210ENST00000535527 FBXO17Q96EF6 278 aa11.39□□□□□ -0.59
CHFR-210ENST00000535527 NRBF2Q96F24 287 aa11.39□□□□□ -0.59
CHFR-210ENST00000535527 CENPNQ96H22 339 aaPredicted RBP11.39□□□□□ -0.59
CHFR-210ENST00000535527 RAB3IPQ96QF0 476 aaPredicted RBP11.39□□□□□ -0.59
CHFR-210ENST00000535527 CIB1Q99828 191 aa11.39□□□□□ -0.59
CHFR-210ENST00000535527 MED20Q9H944 212 aa11.39□□□□□ -0.59
CHFR-210ENST00000535527 CRNNQ9UBG3 495 aaPredicted RBP11.39□□□□□ -0.59
CHFR-210ENST00000535527 A6NIZ1 184 aa11.38□□□□□ -0.59
CHFR-210ENST00000535527 E9PQ18 207 aa11.38□□□□□ -0.59
CHFR-210ENST00000535527 M0R1B8 84 aa11.38□□□□□ -0.59
CHFR-210ENST00000535527 EI24O14681 340 aa11.38□□□□□ -0.59
CHFR-210ENST00000535527 IGKV3-15P01624 115 aa11.38□□□□□ -0.59
CHFR-210ENST00000535527 CECR9P0C854 216 aa11.38□□□□□ -0.59
CHFR-210ENST00000535527 OSMP13725 252 aa11.38□□□□□ -0.59
CHFR-210ENST00000535527 ZNF14P17017 642 aaPredicted RBP11.38□□□□□ -0.59
CHFR-210ENST00000535527 HOXB6P17509 224 aaKnown RBP11.38□□□□□ -0.59
CHFR-210ENST00000535527 ANOS1P23352 680 aa11.38□□□□□ -0.59
CHFR-210ENST00000535527 PYCR1P32322 319 aa11.38□□□□□ -0.59
CHFR-210ENST00000535527 PEX19P40855 299 aa11.38□□□□□ -0.59
CHFR-210ENST00000535527 RAP1BP61224 184 aa11.38□□□□□ -0.59
CHFR-210ENST00000535527 RAP1AP62834 184 aa11.38□□□□□ -0.59
CHFR-210ENST00000535527 ADAM8P78325 824 aa11.38□□□□□ -0.59
CHFR-210ENST00000535527 MRPS34P82930 218 aaKnown RBP11.38□□□□□ -0.59
CHFR-210ENST00000535527 CDK5Q00535 292 aa11.38□□□□□ -0.59
CHFR-210ENST00000535527 PIGFQ07326 219 aa11.38□□□□□ -0.59
CHFR-210ENST00000535527 MSMPQ1L6U9 139 aa11.38□□□□□ -0.59
CHFR-210ENST00000535527 BEX5Q5H9J7 111 aa11.38□□□□□ -0.59
CHFR-210ENST00000535527 FAM205BPQ63HN1 556 aa11.38□□□□□ -0.59
CHFR-210ENST00000535527 OR7E24Q6IFN5 339 aa11.38□□□□□ -0.59
CHFR-210ENST00000535527 ABHD12BQ7Z5M8 362 aaPredicted RBP11.38□□□□□ -0.59
CHFR-210ENST00000535527 PQLC1Q8N2U9 271 aa11.38□□□□□ -0.59
CHFR-210ENST00000535527 PAQR4Q8N4S7 273 aaPredicted RBP11.38□□□□□ -0.59
CHFR-210ENST00000535527 ATG16L2Q8NAA4 619 aa11.38□□□□□ -0.59
CHFR-210ENST00000535527 OR52E2Q8NGJ4 325 aa11.38□□□□□ -0.59
CHFR-210ENST00000535527 MBD6Q96DN6 1003 aa11.38□□□□□ -0.59
CHFR-210ENST00000535527 SLC29A1Q99808 456 aa11.38□□□□□ -0.59
CHFR-210ENST00000535527 RBM4Q9BWF3 364 aaKnown RBP11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms