RNA–Protein interactions for RNA: ENST00000535290.5

CLIP1-206, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2

Gene CLIP1, Length 665 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-206ENST00000535290 PPA2Q9H2U2 334 aa6.84□□□□□ -1.31
CLIP1-206ENST00000535290 C1orf198Q9H425 327 aa6.84□□□□□ -1.31
CLIP1-206ENST00000535290 TMEM38BQ9NVV0 291 aa6.84□□□□□ -1.31
CLIP1-206ENST00000535290 MIOXQ9UGB7 285 aa6.84□□□□□ -1.31
CLIP1-206ENST00000535290 VPREB3Q9UKI3 123 aa6.84□□□□□ -1.31
CLIP1-206ENST00000535290 PPP1R3CQ9UQK1 317 aa6.84□□□□□ -1.31
CLIP1-206ENST00000535290 DNAJC15Q9Y5T4 150 aa6.84□□□□□ -1.31
CLIP1-206ENST00000535290 TANC2Q9HCD6 1990 aa6.83□□□□□ -1.32
CLIP1-206ENST00000535290 IQCMA0A1B0GVH7 501 aa6.83□□□□□ -1.32
CLIP1-206ENST00000535290 ANKRD61A6NGH8 418 aa6.83□□□□□ -1.32
CLIP1-206ENST00000535290 ZNF726A6NNF4 738 aa6.83□□□□□ -1.32
CLIP1-206ENST00000535290 ADARB2-AS1A8MUL3 147 aa6.83□□□□□ -1.32
CLIP1-206ENST00000535290 ZNF879B4DU55 563 aa6.83□□□□□ -1.32
CLIP1-206ENST00000535290 RNASEK-C17orf49H0YIS7 233 aa6.83□□□□□ -1.32
CLIP1-206ENST00000535290 AZIN1O14977 448 aa6.83□□□□□ -1.32
CLIP1-206ENST00000535290 ENSAO43768 121 aaKnown RBP6.83□□□□□ -1.32
CLIP1-206ENST00000535290 NPHS1O60500 1241 aa6.83□□□□□ -1.32
CLIP1-206ENST00000535290 PEX11AO75192 247 aa6.83□□□□□ -1.32
CLIP1-206ENST00000535290 LYPLA1O75608 230 aaPredicted RBP6.83□□□□□ -1.32
CLIP1-206ENST00000535290 PTHP01270 115 aa6.83□□□□□ -1.32
CLIP1-206ENST00000535290 SNRPAP09012 282 aaKnown RBP6.83□□□□□ -1.32
CLIP1-206ENST00000535290 TNFRSF1AP19438 455 aa6.83□□□□□ -1.32
CLIP1-206ENST00000535290 NCF2P19878 526 aaPredicted RBP6.83□□□□□ -1.32
CLIP1-206ENST00000535290 SLC6A2P23975 617 aa6.83□□□□□ -1.32
CLIP1-206ENST00000535290 PHBP35232 272 aa6.83□□□□□ -1.32
CLIP1-206ENST00000535290 CSNK1A1P48729 337 aa6.83□□□□□ -1.32
CLIP1-206ENST00000535290 IDH3AP50213 366 aa6.83□□□□□ -1.32
CLIP1-206ENST00000535290 EMX1Q04741 257 aaPredicted RBP6.83□□□□□ -1.32
CLIP1-206ENST00000535290 COX10Q12887 443 aa6.83□□□□□ -1.32
CLIP1-206ENST00000535290 GNA13Q14344 377 aa6.83□□□□□ -1.32
CLIP1-206ENST00000535290 PGS1Q32NB8 556 aa6.83□□□□□ -1.32
CLIP1-206ENST00000535290 MTX3Q5HYI7 312 aa6.83□□□□□ -1.32
CLIP1-206ENST00000535290 FAM201AQ5SY85 155 aa6.83□□□□□ -1.32
CLIP1-206ENST00000535290 FAM69AQ5T7M9 428 aa6.83□□□□□ -1.32
CLIP1-206ENST00000535290 WDR25Q64LD2 544 aaPredicted RBP6.83□□□□□ -1.32
CLIP1-206ENST00000535290 OR4F3Q6IEY1 312 aa6.83□□□□□ -1.32
CLIP1-206ENST00000535290 TMEM53Q6P2H8 277 aa6.83□□□□□ -1.32
CLIP1-206ENST00000535290 ZYG11AQ6WRX3 759 aa6.83□□□□□ -1.32
CLIP1-206ENST00000535290 ZNF841Q6ZN19 808 aa6.83□□□□□ -1.32
CLIP1-206ENST00000535290 ZNF836Q6ZNA1 936 aa6.83□□□□□ -1.32
CLIP1-206ENST00000535290 Q6ZR03 302 aa6.83□□□□□ -1.32
CLIP1-206ENST00000535290 RNF165Q6ZSG1 346 aa6.83□□□□□ -1.32
CLIP1-206ENST00000535290 RFPL4BQ6ZWI9 263 aa6.83□□□□□ -1.32
CLIP1-206ENST00000535290 VRK2Q86Y07 508 aa6.83□□□□□ -1.32
CLIP1-206ENST00000535290 CLIP4Q8N3C7 705 aa6.83□□□□□ -1.32
CLIP1-206ENST00000535290 SCCPDHQ8NBX0 429 aa6.83□□□□□ -1.32
CLIP1-206ENST00000535290 VPS37AQ8NEZ2 397 aa6.83□□□□□ -1.32
CLIP1-206ENST00000535290 OR2Z1Q8NG97 314 aa6.83□□□□□ -1.32
CLIP1-206ENST00000535290 OR8B3Q8NGG8 313 aa6.83□□□□□ -1.32
CLIP1-206ENST00000535290 LHX4Q969G2 390 aa6.83□□□□□ -1.32
CLIP1-206ENST00000535290 OR8B2Q96RD0 313 aa6.83□□□□□ -1.32
CLIP1-206ENST00000535290 SLC19A3Q9BZV2 496 aa6.83□□□□□ -1.32
CLIP1-206ENST00000535290 SEMA6AQ9H2E6 1030 aa6.83□□□□□ -1.32
CLIP1-206ENST00000535290 CNTD2Q9H8S5 307 aa6.83□□□□□ -1.32
CLIP1-206ENST00000535290 MTHFD2LQ9H903 347 aaPredicted RBP6.83□□□□□ -1.32
CLIP1-206ENST00000535290 KIF17Q9P2E2 1029 aa6.83□□□□□ -1.32
CLIP1-206ENST00000535290 CLN8Q9UBY8 286 aa6.83□□□□□ -1.32
CLIP1-206ENST00000535290 ZNF180Q9UJW8 692 aa6.83□□□□□ -1.32
CLIP1-206ENST00000535290 EMCNQ9ULC0 261 aa6.83□□□□□ -1.32
CLIP1-206ENST00000535290 CHST2Q9Y4C5 530 aa6.83□□□□□ -1.32
CLIP1-206ENST00000535290 IGKV1D-42A0A075B6H8 117 aa6.82□□□□□ -1.32
CLIP1-206ENST00000535290 LOC100509620A0A075B734 347 aa6.82□□□□□ -1.32
CLIP1-206ENST00000535290 A0A087WUJ7 227 aa6.82□□□□□ -1.32
CLIP1-206ENST00000535290 TMEM233B4DJY2 109 aa6.82□□□□□ -1.32
CLIP1-206ENST00000535290 OR2T1O43869 369 aa6.82□□□□□ -1.32
CLIP1-206ENST00000535290 SERPINI2O75830 405 aa6.82□□□□□ -1.32
CLIP1-206ENST00000535290 CYB5R3P00387 301 aaPredicted RBP6.82□□□□□ -1.32
CLIP1-206ENST00000535290 DBIP07108 87 aaKnown RBP6.82□□□□□ -1.32
CLIP1-206ENST00000535290 MMP7P09237 267 aaPredicted RBP6.82□□□□□ -1.32
CLIP1-206ENST00000535290 VSIG10L2P0DP72 767 aa6.82□□□□□ -1.32
CLIP1-206ENST00000535290 CD28P10747 220 aa6.82□□□□□ -1.32
CLIP1-206ENST00000535290 NQO1P15559 274 aaKnown RBP6.82□□□□□ -1.32
CLIP1-206ENST00000535290 CD33P20138 364 aa6.82□□□□□ -1.32
CLIP1-206ENST00000535290 PRPS1L1P21108 318 aa6.82□□□□□ -1.32
CLIP1-206ENST00000535290 STOMP27105 288 aa6.82□□□□□ -1.32
CLIP1-206ENST00000535290 APLNRP35414 380 aa6.82□□□□□ -1.32
CLIP1-206ENST00000535290 PAFAH1B1P43034 410 aa6.82□□□□□ -1.32
CLIP1-206ENST00000535290 PPP1CBP62140 327 aa6.82□□□□□ -1.32
CLIP1-206ENST00000535290 HOXC5Q00444 222 aa6.82□□□□□ -1.32
CLIP1-206ENST00000535290 PLP2Q04941 152 aa6.82□□□□□ -1.32
CLIP1-206ENST00000535290 PSG7Q13046 419 aa6.82□□□□□ -1.32
CLIP1-206ENST00000535290 SLC36A2Q495M3 483 aa6.82□□□□□ -1.32
CLIP1-206ENST00000535290 KLHL22Q53GT1 634 aa6.82□□□□□ -1.32
CLIP1-206ENST00000535290 ZMAT1Q5H9K5 638 aa6.82□□□□□ -1.32
CLIP1-206ENST00000535290 DMRTC1Q5HYR2 192 aa6.82□□□□□ -1.32
CLIP1-206ENST00000535290 PABPC1L2AQ5JQF8 200 aa6.82□□□□□ -1.32
CLIP1-206ENST00000535290 CFAP157Q5JU67 520 aa6.82□□□□□ -1.32
CLIP1-206ENST00000535290 IL23RQ5VWK5 629 aa6.82□□□□□ -1.32
CLIP1-206ENST00000535290 LYPD2Q6UXB3 125 aa6.82□□□□□ -1.32
CLIP1-206ENST00000535290 TIFABQ6ZNK6 161 aa6.82□□□□□ -1.32
CLIP1-206ENST00000535290 LRRC74BQ6ZQY2 392 aa6.82□□□□□ -1.32
CLIP1-206ENST00000535290 SLC16A14Q7RTX9 510 aa6.82□□□□□ -1.32
CLIP1-206ENST00000535290 SERPINA11Q86U17 422 aa6.82□□□□□ -1.32
CLIP1-206ENST00000535290 ANKRD46Q86W74 232 aa6.82□□□□□ -1.32
CLIP1-206ENST00000535290 RBM15BQ8NDT2 890 aaKnown RBP6.82□□□□□ -1.32
CLIP1-206ENST00000535290 ADPRHL1Q8NDY3 354 aa6.82□□□□□ -1.32
CLIP1-206ENST00000535290 OR4F17Q8NGA8 305 aa6.82□□□□□ -1.32
CLIP1-206ENST00000535290 OR4A15Q8NGL6 344 aa6.82□□□□□ -1.32
CLIP1-206ENST00000535290 ZNF420Q8TAQ5 688 aaPredicted RBP6.82□□□□□ -1.32
CLIP1-206ENST00000535290 MUC7Q8TAX7 377 aa6.82□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms