RNA–Protein interactions for RNA: ENST00000534830.5

CLSTN3-203, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 547 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-203ENST00000534830 SYT3Q9BQG1 590 aa8.61□□□□□ -1.03
CLSTN3-203ENST00000534830 TXNIPQ9H3M7 391 aa8.61□□□□□ -1.03
CLSTN3-203ENST00000534830 ZNF696Q9H7X3 374 aa8.61□□□□□ -1.03
CLSTN3-203ENST00000534830 SIAEQ9HAT2 523 aa8.61□□□□□ -1.03
CLSTN3-203ENST00000534830 SMURF2Q9HAU4 748 aa8.61□□□□□ -1.03
CLSTN3-203ENST00000534830 DYNLRB1Q9NP97 96 aa8.61□□□□□ -1.03
CLSTN3-203ENST00000534830 MAN2C1Q9NTJ4 1040 aa8.61□□□□□ -1.03
CLSTN3-203ENST00000534830 GMPR2Q9P2T1 348 aaKnown RBP8.61□□□□□ -1.03
CLSTN3-203ENST00000534830 AP3M1Q9Y2T2 418 aa8.61□□□□□ -1.03
CLSTN3-203ENST00000534830 MED31Q9Y3C7 131 aa8.61□□□□□ -1.03
CLSTN3-203ENST00000534830 UGT2A1Q9Y4X1 527 aa8.61□□□□□ -1.03
CLSTN3-203ENST00000534830 TRIM77I1YAP6 450 aa8.6□□□□□ -1.03
CLSTN3-203ENST00000534830 FFAR1O14842 300 aa8.6□□□□□ -1.03
CLSTN3-203ENST00000534830 PIP5K1CO60331 668 aa8.6□□□□□ -1.03
CLSTN3-203ENST00000534830 NCR1O76036 304 aa8.6□□□□□ -1.03
CLSTN3-203ENST00000534830 PRSS23O95084 383 aa8.6□□□□□ -1.03
CLSTN3-203ENST00000534830 PTHP01270 115 aa8.6□□□□□ -1.03
CLSTN3-203ENST00000534830 VIMP08670 466 aaKnown RBP8.6□□□□□ -1.03
CLSTN3-203ENST00000534830 CCL2P13500 99 aa8.6□□□□□ -1.03
CLSTN3-203ENST00000534830 ACHEP22303 614 aa8.6□□□□□ -1.03
CLSTN3-203ENST00000534830 DAP3P51398 398 aaKnown RBP8.6□□□□□ -1.03
CLSTN3-203ENST00000534830 ZNF84P51523 738 aa8.6□□□□□ -1.03
CLSTN3-203ENST00000534830 CDH15P55291 814 aa8.6□□□□□ -1.03
CLSTN3-203ENST00000534830 UCP2P55851 309 aa8.6□□□□□ -1.03
CLSTN3-203ENST00000534830 MRPS34P82930 218 aaKnown RBP8.6□□□□□ -1.03
CLSTN3-203ENST00000534830 GUCY1A3Q02108 690 aa8.6□□□□□ -1.03
CLSTN3-203ENST00000534830 SF3A3Q12874 501 aaKnown RBP eCLIP8.6□□□□□ -1.036e-9■■■■■ 32.1
CLSTN3-203ENST00000534830 MAD2L1BPQ15013 274 aaPredicted RBP8.6□□□□□ -1.03
CLSTN3-203ENST00000534830 TAF11Q15544 211 aa8.6□□□□□ -1.03
CLSTN3-203ENST00000534830 SLC36A2Q495M3 483 aa8.6□□□□□ -1.03
CLSTN3-203ENST00000534830 LRRC23Q53EV4 343 aaPredicted RBP8.6□□□□□ -1.03
CLSTN3-203ENST00000534830 AWAT1Q58HT5 328 aa8.6□□□□□ -1.03
CLSTN3-203ENST00000534830 GKAP1Q5VSY0 366 aaPredicted RBP8.6□□□□□ -1.03
CLSTN3-203ENST00000534830 RGS7BPQ6MZT1 257 aaPredicted RBP8.6□□□□□ -1.03
CLSTN3-203ENST00000534830 FOXL2NBQ6ZUU3 175 aa8.6□□□□□ -1.03
CLSTN3-203ENST00000534830 SLC16A14Q7RTX9 510 aa8.6□□□□□ -1.03
CLSTN3-203ENST00000534830 PEG10Q86TG7 708 aaKnown RBP8.6□□□□□ -1.03
CLSTN3-203ENST00000534830 LINC01356Q8N9X3 169 aa8.6□□□□□ -1.03
CLSTN3-203ENST00000534830 SYT14Q8NB59 555 aa8.6□□□□□ -1.03
CLSTN3-203ENST00000534830 CPEB3Q8NE35 698 aaKnown RBP8.6□□□□□ -1.03
CLSTN3-203ENST00000534830 RP9Q8TA86 221 aaKnown RBP8.6□□□□□ -1.03
CLSTN3-203ENST00000534830 ZNF418Q8TF45 676 aaPredicted RBP8.6□□□□□ -1.03
CLSTN3-203ENST00000534830 RDH5Q92781 318 aa8.6□□□□□ -1.03
CLSTN3-203ENST00000534830 YIPF5Q969M3 257 aa8.6□□□□□ -1.03
CLSTN3-203ENST00000534830 C1orf198Q9H425 327 aa8.6□□□□□ -1.03
CLSTN3-203ENST00000534830 ARMCX1Q9P291 453 aa8.6□□□□□ -1.03
CLSTN3-203ENST00000534830 STX18Q9P2W9 335 aaKnown RBP8.6□□□□□ -1.03
CLSTN3-203ENST00000534830 ZNF346Q9UL40 294 aaKnown RBP8.6□□□□□ -1.03
CLSTN3-203ENST00000534830 FZR1Q9UM11 496 aa8.6□□□□□ -1.03
CLSTN3-203ENST00000534830 PCDHGB1Q9Y5G3 927 aa8.6□□□□□ -1.03
CLSTN3-203ENST00000534830 SNX13Q9Y5W8 968 aa8.6□□□□□ -1.03
CLSTN3-203ENST00000534830 CAPN7Q9Y6W3 813 aa8.6□□□□□ -1.03
CLSTN3-203ENST00000534830 TANC2Q9HCD6 1990 aa8.59□□□□□ -1.03
CLSTN3-203ENST00000534830 MCIDASD6RGH6 385 aa8.59□□□□□ -1.03
CLSTN3-203ENST00000534830 J3KTA2 159 aa8.59□□□□□ -1.03
CLSTN3-203ENST00000534830 RP2O75695 350 aa8.59□□□□□ -1.03
CLSTN3-203ENST00000534830 SLC2A10O95528 541 aa8.59□□□□□ -1.03
CLSTN3-203ENST00000534830 CLPTM1O96005 669 aa8.59□□□□□ -1.03
CLSTN3-203ENST00000534830 NAT2P11245 290 aa8.59□□□□□ -1.03
CLSTN3-203ENST00000534830 TCN1P20061 433 aaPredicted RBP8.59□□□□□ -1.03
CLSTN3-203ENST00000534830 MAKP20794 623 aa8.59□□□□□ -1.03
CLSTN3-203ENST00000534830 CDAP32320 146 aa8.59□□□□□ -1.03
CLSTN3-203ENST00000534830 RAD52P43351 418 aa8.59□□□□□ -1.03
CLSTN3-203ENST00000534830 TMEM33P57088 247 aa8.59□□□□□ -1.03
CLSTN3-203ENST00000534830 RPL27P61353 136 aaKnown RBP8.59□□□□□ -1.03
CLSTN3-203ENST00000534830 ERVS71-1P61550 626 aa8.59□□□□□ -1.03
CLSTN3-203ENST00000534830 PRKCDQ05655 676 aa8.59□□□□□ -1.03
CLSTN3-203ENST00000534830 TBC1D28Q2M2D7 210 aa8.59□□□□□ -1.03
CLSTN3-203ENST00000534830 ALG10Q5BKT4 473 aa8.59□□□□□ -1.03
CLSTN3-203ENST00000534830 TMEM255AQ5JRV8 349 aa8.59□□□□□ -1.03
CLSTN3-203ENST00000534830 UGT2A3Q6UWM9 527 aa8.59□□□□□ -1.03
CLSTN3-203ENST00000534830 TREML4Q6UXN2 200 aa8.59□□□□□ -1.03
CLSTN3-203ENST00000534830 CBLL1Q75N03 491 aa8.59□□□□□ -1.03
CLSTN3-203ENST00000534830 TSEN54Q7Z6J9 526 aaKnown RBP8.59□□□□□ -1.03
CLSTN3-203ENST00000534830 VTCN1Q7Z7D3 282 aa8.59□□□□□ -1.03
CLSTN3-203ENST00000534830 RNF113BQ8IZP6 322 aaKnown RBP8.59□□□□□ -1.03
CLSTN3-203ENST00000534830 OFCC1Q8IZS5 231 aa8.59□□□□□ -1.03
CLSTN3-203ENST00000534830 LRRC18Q8N456 261 aa8.59□□□□□ -1.03
CLSTN3-203ENST00000534830 POU5F2Q8N7G0 328 aa8.59□□□□□ -1.03
CLSTN3-203ENST00000534830 FAM156AQ8NDB6 213 aa8.59□□□□□ -1.03
CLSTN3-203ENST00000534830 RBM15BQ8NDT2 890 aaKnown RBP8.59□□□□□ -1.03
CLSTN3-203ENST00000534830 OR1J2Q8NGS2 313 aa8.59□□□□□ -1.03
CLSTN3-203ENST00000534830 ZNF519Q8TB69 540 aa8.59□□□□□ -1.03
CLSTN3-203ENST00000534830 RCN3Q96D15 328 aa8.59□□□□□ -1.03
CLSTN3-203ENST00000534830 BPIFA2Q96DR5 249 aa8.59□□□□□ -1.03
CLSTN3-203ENST00000534830 TPD52L3Q96J77 140 aa8.59□□□□□ -1.03
CLSTN3-203ENST00000534830 POM121L2Q96KW2 1035 aa8.59□□□□□ -1.03
CLSTN3-203ENST00000534830 TSPAN32Q96QS1 320 aa8.59□□□□□ -1.03
CLSTN3-203ENST00000534830 ALG12Q9BV10 488 aa8.59□□□□□ -1.03
CLSTN3-203ENST00000534830 BCL2L14Q9BZR8 327 aa8.59□□□□□ -1.03
CLSTN3-203ENST00000534830 RNF121Q9H920 327 aa8.59□□□□□ -1.03
CLSTN3-203ENST00000534830 ZNF275Q9NSD4 429 aaPredicted RBP8.59□□□□□ -1.03
CLSTN3-203ENST00000534830 NKIRAS2Q9NYR9 191 aa8.59□□□□□ -1.03
CLSTN3-203ENST00000534830 TAAR3PQ9P1P4 343 aa8.59□□□□□ -1.03
CLSTN3-203ENST00000534830 DUSP13Q9UII6 198 aa8.59□□□□□ -1.03
CLSTN3-203ENST00000534830 LOC100509620A0A075B734 347 aa8.58□□□□□ -1.04
CLSTN3-203ENST00000534830 A0A087WUU8 490 aa8.58□□□□□ -1.04
CLSTN3-203ENST00000534830 IQCMA0A1B0GVH7 501 aa8.58□□□□□ -1.04
CLSTN3-203ENST00000534830 C17orf100A8MU93 164 aa8.58□□□□□ -1.04
CLSTN3-203ENST00000534830 NME4O00746 187 aa8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms