RNA–Protein interactions for RNA: ENST00000533953.5

CMTM1-219, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CMTM1, Length 934 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-219ENST00000533953 FABP6P51161 128 aa11.61□□□□□ -0.55
CMTM1-219ENST00000533953 THEM4Q5T1C6 240 aa11.61□□□□□ -0.55
CMTM1-219ENST00000533953 C1orf146Q5VVC0 180 aa11.61□□□□□ -0.55
CMTM1-219ENST00000533953 ZNF620Q6ZNG0 422 aa11.61□□□□□ -0.55
CMTM1-219ENST00000533953 SLC16A14Q7RTX9 510 aa11.61□□□□□ -0.55
CMTM1-219ENST00000533953 HDDC2Q7Z4H3 204 aa11.61□□□□□ -0.55
CMTM1-219ENST00000533953 ZNF584Q8IVC4 421 aa11.61□□□□□ -0.55
CMTM1-219ENST00000533953 DEPDC4Q8N2C3 294 aa11.61□□□□□ -0.55
CMTM1-219ENST00000533953 PAPD5Q8NDF8 572 aaKnown RBP11.61□□□□□ -0.55
CMTM1-219ENST00000533953 OR10G2Q8NGC3 310 aa11.61□□□□□ -0.55
CMTM1-219ENST00000533953 GIPC3Q8TF64 312 aa11.61□□□□□ -0.55
CMTM1-219ENST00000533953 FBXO17Q96EF6 278 aa11.61□□□□□ -0.55
CMTM1-219ENST00000533953 GPX7Q96SL4 187 aaPredicted RBP11.61□□□□□ -0.55
CMTM1-219ENST00000533953 NMNAT3Q96T66 252 aa11.61□□□□□ -0.55
CMTM1-219ENST00000533953 FEVQ99581 238 aa11.61□□□□□ -0.55
CMTM1-219ENST00000533953 FOXC2Q99958 501 aa11.61□□□□□ -0.55
CMTM1-219ENST00000533953 DHRS9Q9BPW9 319 aa11.61□□□□□ -0.55
CMTM1-219ENST00000533953 NUAK2Q9H093 628 aa11.61□□□□□ -0.55
CMTM1-219ENST00000533953 FN3KQ9H479 309 aa11.61□□□□□ -0.55
CMTM1-219ENST00000533953 SRA1Q9HD15 236 aaKnown RBP11.61□□□□□ -0.55
CMTM1-219ENST00000533953 STX18Q9P2W9 335 aaKnown RBP11.61□□□□□ -0.55
CMTM1-219ENST00000533953 EDARQ9UNE0 448 aa11.61□□□□□ -0.55
CMTM1-219ENST00000533953 RAB36O95755 333 aa11.6□□□□□ -0.55
CMTM1-219ENST00000533953 TXNDC12O95881 172 aa11.6□□□□□ -0.55
CMTM1-219ENST00000533953 CRYAAP02489 173 aa11.6□□□□□ -0.55
CMTM1-219ENST00000533953 TP53P04637 393 aaPredicted RBP11.6□□□□□ -0.55
CMTM1-219ENST00000533953 TTKP33981 857 aa11.6□□□□□ -0.55
CMTM1-219ENST00000533953 RPS6KA3P51812 740 aa11.6□□□□□ -0.55
CMTM1-219ENST00000533953 MRPS34P82930 218 aaKnown RBP11.6□□□□□ -0.55
CMTM1-219ENST00000533953 FAM205BPQ63HN1 556 aa11.6□□□□□ -0.55
CMTM1-219ENST00000533953 GPR139Q6DWJ6 353 aa11.6□□□□□ -0.55
CMTM1-219ENST00000533953 KRT80Q6KB66 452 aa11.6□□□□□ -0.55
CMTM1-219ENST00000533953 LEG1Q6P5S2 330 aa11.6□□□□□ -0.55
CMTM1-219ENST00000533953 ZSCAN2Q7Z7L9 614 aaPredicted RBP11.6□□□□□ -0.55
CMTM1-219ENST00000533953 KRTAP1-3Q8IUG1 177 aa11.6□□□□□ -0.55
CMTM1-219ENST00000533953 CCDC36Q8IYA8 594 aa11.6□□□□□ -0.55
CMTM1-219ENST00000533953 PAQR4Q8N4S7 273 aaPredicted RBP11.6□□□□□ -0.55
CMTM1-219ENST00000533953 FAM169BQ8N8A8 192 aa11.6□□□□□ -0.55
CMTM1-219ENST00000533953 CPEB3Q8NE35 698 aaKnown RBP11.6□□□□□ -0.55
CMTM1-219ENST00000533953 WFDC11Q8NEX6 87 aa11.6□□□□□ -0.55
CMTM1-219ENST00000533953 OR4Q3Q8NH05 313 aa11.6□□□□□ -0.55
CMTM1-219ENST00000533953 AKR7LQ8NHP1 331 aa11.6□□□□□ -0.55
CMTM1-219ENST00000533953 TMEM171Q8WVE6 324 aa11.6□□□□□ -0.55
CMTM1-219ENST00000533953 PIGTQ969N2 578 aa11.6□□□□□ -0.55
CMTM1-219ENST00000533953 KCNS3Q9BQ31 491 aa11.6□□□□□ -0.55
CMTM1-219ENST00000533953 TRAF4Q9BUZ4 470 aaPredicted RBP11.6□□□□□ -0.55
CMTM1-219ENST00000533953 NDEL1Q9GZM8 345 aa11.6□□□□□ -0.55
CMTM1-219ENST00000533953 SIAEQ9HAT2 523 aa11.6□□□□□ -0.55
CMTM1-219ENST00000533953 SMURF2Q9HAU4 748 aa11.6□□□□□ -0.55
CMTM1-219ENST00000533953 NTN4Q9HB63 628 aa11.6□□□□□ -0.55
CMTM1-219ENST00000533953 ARMC1Q9NVT9 282 aa11.6□□□□□ -0.55
CMTM1-219ENST00000533953 BEX4Q9NWD9 120 aaPredicted RBP11.6□□□□□ -0.55
CMTM1-219ENST00000533953 PDP1Q9P0J1 537 aaPredicted RBP11.6□□□□□ -0.55
CMTM1-219ENST00000533953 COA3Q9Y2R0 106 aaPredicted RBP11.6□□□□□ -0.55
CMTM1-219ENST00000533953 USF3Q68DE3 2245 aa11.6□□□□□ -0.55
CMTM1-219ENST00000533953 MGRN1O60291 552 aa11.59□□□□□ -0.55
CMTM1-219ENST00000533953 E2F6O75461 281 aa11.59□□□□□ -0.55
CMTM1-219ENST00000533953 UBL3O95164 117 aa11.59□□□□□ -0.55
CMTM1-219ENST00000533953 FARS2O95363 451 aaKnown RBP11.59□□□□□ -0.55
CMTM1-219ENST00000533953 MMP7P09237 267 aaPredicted RBP11.59□□□□□ -0.55
CMTM1-219ENST00000533953 ZNF32P17041 273 aa11.59□□□□□ -0.55
CMTM1-219ENST00000533953 THBS4P35443 961 aa11.59□□□□□ -0.55
CMTM1-219ENST00000533953 PTH2RP49190 550 aa11.59□□□□□ -0.55
CMTM1-219ENST00000533953 CENPAP49450 140 aa11.59□□□□□ -0.55
CMTM1-219ENST00000533953 NKX6-1P78426 367 aaPredicted RBP11.59□□□□□ -0.55
CMTM1-219ENST00000533953 ENDOGQ14249 297 aaKnown RBP11.59□□□□□ -0.55
CMTM1-219ENST00000533953 MSMPQ1L6U9 139 aa11.59□□□□□ -0.55
CMTM1-219ENST00000533953 MST1LQ2TV78 715 aa11.59□□□□□ -0.55
CMTM1-219ENST00000533953 PABPC1L2AQ5JQF8 200 aa11.59□□□□□ -0.55
CMTM1-219ENST00000533953 RASSF6Q6ZTQ3 369 aa11.59□□□□□ -0.55
CMTM1-219ENST00000533953 AMIGO2Q86SJ2 522 aa11.59□□□□□ -0.55
CMTM1-219ENST00000533953 LURAP1LQ8IV03 231 aa11.59□□□□□ -0.55
CMTM1-219ENST00000533953 IQCF1Q8N6M8 205 aa11.59□□□□□ -0.55
CMTM1-219ENST00000533953 CYB561A3Q8NBI2 242 aa11.59□□□□□ -0.55
CMTM1-219ENST00000533953 SDR9C7Q8NEX9 313 aa11.59□□□□□ -0.55
CMTM1-219ENST00000533953 OR52E2Q8NGJ4 325 aa11.59□□□□□ -0.55
CMTM1-219ENST00000533953 NANOS1Q8WY41 292 aaKnown RBP11.59□□□□□ -0.55
CMTM1-219ENST00000533953 POP5Q969H6 163 aaKnown RBP11.59□□□□□ -0.55
CMTM1-219ENST00000533953 TSSK6Q9BXA6 273 aa11.59□□□□□ -0.55
CMTM1-219ENST00000533953 CXXC4Q9H2H0 198 aa11.59□□□□□ -0.55
CMTM1-219ENST00000533953 OR51B6Q9H340 312 aa11.59□□□□□ -0.55
CMTM1-219ENST00000533953 VSX1Q9NZR4 365 aaPredicted RBP11.59□□□□□ -0.55
CMTM1-219ENST00000533953 GDF2Q9UK05 429 aaPredicted RBP11.59□□□□□ -0.55
CMTM1-219ENST00000533953 CDH10Q9Y6N8 788 aa11.59□□□□□ -0.55
CMTM1-219ENST00000533953 RAI1Q7Z5J4 1906 aaPredicted RBP11.58□□□□□ -0.55
CMTM1-219ENST00000533953 OR6C68A6NDL8 312 aa11.58□□□□□ -0.56
CMTM1-219ENST00000533953 OVOL3O00110 214 aa11.58□□□□□ -0.56
CMTM1-219ENST00000533953 EBAG9O00559 213 aa11.58□□□□□ -0.56
CMTM1-219ENST00000533953 BHLHE40O14503 412 aa11.58□□□□□ -0.56
CMTM1-219ENST00000533953 ARPC3O15145 178 aa11.58□□□□□ -0.56
CMTM1-219ENST00000533953 GPRIN2O60269 458 aa11.58□□□□□ -0.56
CMTM1-219ENST00000533953 SERPINA5P05154 406 aa11.58□□□□□ -0.56
CMTM1-219ENST00000533953 ZNF35P13682 527 aa11.58□□□□□ -0.56
CMTM1-219ENST00000533953 APEX1P27695 318 aaKnown RBP11.58□□□□□ -0.56
CMTM1-219ENST00000533953 NOS3P29474 1203 aa11.58□□□□□ -0.56
CMTM1-219ENST00000533953 ADAM8P78325 824 aa11.58□□□□□ -0.56
CMTM1-219ENST00000533953 PSG4Q00888 419 aa11.58□□□□□ -0.56
CMTM1-219ENST00000533953 ADIPOQQ15848 244 aa11.58□□□□□ -0.56
CMTM1-219ENST00000533953 MEP1BQ16820 701 aa11.58□□□□□ -0.56
CMTM1-219ENST00000533953 C3orf36Q3SXR2 165 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms