RNA–Protein interactions for RNA: ENST00000533811.1

PACS1-214, Transcript of phosphofurin acidic cluster sorting protein 1, humanhuman

TSL 3

Gene PACS1, Length 541 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACS1-214ENST00000533811 PLPP3O14495 311 aa7.8□□□□□ -1.16
PACS1-214ENST00000533811 DHHO43323 396 aa7.8□□□□□ -1.16
PACS1-214ENST00000533811 SNNO75324 88 aaPredicted RBP7.8□□□□□ -1.16
PACS1-214ENST00000533811 TGDSO95455 350 aa7.8□□□□□ -1.16
PACS1-214ENST00000533811 SNAP29O95721 258 aa7.8□□□□□ -1.16
PACS1-214ENST00000533811 IGHV2-70P01814 119 aa7.8□□□□□ -1.16
PACS1-214ENST00000533811 VIMP08670 466 aaKnown RBP7.8□□□□□ -1.16
PACS1-214ENST00000533811 MVDP53602 400 aa7.8□□□□□ -1.16
PACS1-214ENST00000533811 LRRC74AQ0VAA2 488 aa7.8□□□□□ -1.16
PACS1-214ENST00000533811 PDCD4Q53EL6 469 aaKnown RBP7.8□□□□□ -1.16
PACS1-214ENST00000533811 ESCO2Q56NI9 601 aa7.8□□□□□ -1.16
PACS1-214ENST00000533811 SPRNQ5BIV9 151 aa7.8□□□□□ -1.16
PACS1-214ENST00000533811 OLFML2AQ68BL7 652 aa7.8□□□□□ -1.16
PACS1-214ENST00000533811 WDR88Q6ZMY6 472 aa7.8□□□□□ -1.16
PACS1-214ENST00000533811 SLC35D2Q76EJ3 337 aa7.8□□□□□ -1.16
PACS1-214ENST00000533811 SLC25A40Q8TBP6 338 aa7.8□□□□□ -1.16
PACS1-214ENST00000533811 TMEM54Q969K7 222 aa7.8□□□□□ -1.16
PACS1-214ENST00000533811 MAL2Q969L2 176 aa7.8□□□□□ -1.16
PACS1-214ENST00000533811 ZNF566Q969W8 418 aa7.8□□□□□ -1.16
PACS1-214ENST00000533811 SLC47A1Q96FL8 570 aa7.8□□□□□ -1.16
PACS1-214ENST00000533811 SLC41A3Q96GZ6 507 aa7.8□□□□□ -1.16
PACS1-214ENST00000533811 C7orf26Q96N11 449 aa7.8□□□□□ -1.16
PACS1-214ENST00000533811 SORT1Q99523 831 aa7.8□□□□□ -1.16
PACS1-214ENST00000533811 C20orf27Q9GZN8 174 aa7.8□□□□□ -1.16
PACS1-214ENST00000533811 MARCH7Q9H992 704 aa7.8□□□□□ -1.16
PACS1-214ENST00000533811 TPT1P8Q9HAU6 139 aa7.8□□□□□ -1.16
PACS1-214ENST00000533811 PATZ1Q9HBE1 687 aaKnown RBP7.8□□□□□ -1.16
PACS1-214ENST00000533811 TCF7L2Q9NQB0 619 aa7.8□□□□□ -1.16
PACS1-214ENST00000533811 AIG1Q9NVV5 245 aa7.8□□□□□ -1.16
PACS1-214ENST00000533811 MRPL39Q9NYK5 338 aaKnown RBP7.8□□□□□ -1.16
PACS1-214ENST00000533811 HAO1Q9UJM8 370 aa7.8□□□□□ -1.16
PACS1-214ENST00000533811 MMP24Q9Y5R2 645 aa7.8□□□□□ -1.16
PACS1-214ENST00000533811 GPR45Q9Y5Y3 372 aa7.8□□□□□ -1.16
PACS1-214ENST00000533811 TRPC5OSA6NMA1 111 aa7.79□□□□□ -1.16
PACS1-214ENST00000533811 RNF13O43567 381 aa7.79□□□□□ -1.16
PACS1-214ENST00000533811 MFN2O95140 757 aa7.79□□□□□ -1.16
PACS1-214ENST00000533811 QDPRP09417 244 aa7.79□□□□□ -1.16
PACS1-214ENST00000533811 NUDT7P0C024 238 aa7.79□□□□□ -1.16
PACS1-214ENST00000533811 TROVE2P10155 538 aaKnown RBP eCLIP7.79□□□□□ -1.16
PACS1-214ENST00000533811 RGS8P57771 180 aaPredicted RBP7.79□□□□□ -1.16
PACS1-214ENST00000533811 CLRN1P58418 232 aa7.79□□□□□ -1.16
PACS1-214ENST00000533811 TNFAIP6P98066 277 aaPredicted RBP7.79□□□□□ -1.16
PACS1-214ENST00000533811 PABPC1L2AQ5JQF8 200 aa7.79□□□□□ -1.16
PACS1-214ENST00000533811 TMEM255AQ5JRV8 349 aa7.79□□□□□ -1.16
PACS1-214ENST00000533811 C6orf10Q5SRN2 563 aa7.79□□□□□ -1.16
PACS1-214ENST00000533811 ULK3Q6PHR2 472 aa7.79□□□□□ -1.16
PACS1-214ENST00000533811 LRFN4Q6PJG9 635 aa7.79□□□□□ -1.16
PACS1-214ENST00000533811 FIP1L1Q6UN15 594 aaKnown RBP7.79□□□□□ -1.16
PACS1-214ENST00000533811 PXKQ7Z7A4 578 aa7.79□□□□□ -1.16
PACS1-214ENST00000533811 DPPA2Q7Z7J5 298 aa7.79□□□□□ -1.16
PACS1-214ENST00000533811 HIPK4Q8NE63 616 aa7.79□□□□□ -1.16
PACS1-214ENST00000533811 OR5J2Q8NH18 312 aa7.79□□□□□ -1.16
PACS1-214ENST00000533811 BBS10Q8TAM1 723 aa7.79□□□□□ -1.16
PACS1-214ENST00000533811 FAM110DQ8TAY7 271 aaPredicted RBP7.79□□□□□ -1.16
PACS1-214ENST00000533811 STON2Q8WXE9 905 aa7.79□□□□□ -1.16
PACS1-214ENST00000533811 SLC35B4Q969S0 331 aa7.79□□□□□ -1.16
PACS1-214ENST00000533811 RBM4BQ9BQ04 359 aaKnown RBP7.79□□□□□ -1.16
PACS1-214ENST00000533811 OR2J1Q9GZK6 312 aa7.79□□□□□ -1.16
PACS1-214ENST00000533811 FAM107BQ9H098 131 aa7.79□□□□□ -1.16
PACS1-214ENST00000533811 KCNN2Q9H2S1 579 aa7.79□□□□□ -1.16
PACS1-214ENST00000533811 NANOGQ9H9S0 305 aa7.79□□□□□ -1.16
PACS1-214ENST00000533811 TMEM27Q9HBJ8 222 aa7.79□□□□□ -1.16
PACS1-214ENST00000533811 MSL2Q9HCI7 577 aa7.79□□□□□ -1.16
PACS1-214ENST00000533811 PNPOQ9NVS9 261 aa7.79□□□□□ -1.16
PACS1-214ENST00000533811 EIF3KQ9UBQ5 218 aaKnown RBP7.79□□□□□ -1.16
PACS1-214ENST00000533811 SLC13A4Q9UKG4 626 aa7.79□□□□□ -1.16
PACS1-214ENST00000533811 C5orf49A4QMS7 147 aa7.78□□□□□ -1.16
PACS1-214ENST00000533811 EBAG9O00559 213 aa7.78□□□□□ -1.16
PACS1-214ENST00000533811 HDAC3O15379 428 aa7.78□□□□□ -1.16
PACS1-214ENST00000533811 TIMM8AO60220 97 aaPredicted RBP7.78□□□□□ -1.16
PACS1-214ENST00000533811 EDF1O60869 148 aaKnown RBP7.78□□□□□ -1.16
PACS1-214ENST00000533811 TSPAN15O95858 294 aa7.78□□□□□ -1.16
PACS1-214ENST00000533811 KITP10721 976 aa7.78□□□□□ -1.16
PACS1-214ENST00000533811 STOMP27105 288 aa7.78□□□□□ -1.16
PACS1-214ENST00000533811 CD80P33681 288 aa7.78□□□□□ -1.16
PACS1-214ENST00000533811 WNT5AP41221 380 aa7.78□□□□□ -1.16
PACS1-214ENST00000533811 SLC6A9P48067 706 aa7.78□□□□□ -1.16
PACS1-214ENST00000533811 GDI2P50395 445 aaKnown RBP7.78□□□□□ -1.16
PACS1-214ENST00000533811 MMP15P51511 669 aa7.78□□□□□ -1.16
PACS1-214ENST00000533811 ZNF84P51523 738 aa7.78□□□□□ -1.16
PACS1-214ENST00000533811 BTG1P62324 171 aa7.78□□□□□ -1.16
PACS1-214ENST00000533811 OR1Q1Q15612 314 aa7.78□□□□□ -1.16
PACS1-214ENST00000533811 DEFB112Q30KQ8 113 aa7.78□□□□□ -1.16
PACS1-214ENST00000533811 ZNF362Q5T0B9 420 aaPredicted RBP7.78□□□□□ -1.16
PACS1-214ENST00000533811 FAM91A1Q658Y4 838 aa7.78□□□□□ -1.16
PACS1-214ENST00000533811 NXNQ6DKJ4 435 aa7.78□□□□□ -1.16
PACS1-214ENST00000533811 BTNL3Q6UXE8 466 aa7.78□□□□□ -1.16
PACS1-214ENST00000533811 NHLRC1Q6VVB1 395 aa7.78□□□□□ -1.16
PACS1-214ENST00000533811 BRD3OSQ6XYD6 125 aa7.78□□□□□ -1.16
PACS1-214ENST00000533811 RHOUQ7L0Q8 258 aa7.78□□□□□ -1.16
PACS1-214ENST00000533811 COMTD1Q86VU5 262 aa7.78□□□□□ -1.16
PACS1-214ENST00000533811 ZNF101Q8IZC7 436 aa7.78□□□□□ -1.16
PACS1-214ENST00000533811 LSMEM1Q8N8F7 131 aa7.78□□□□□ -1.16
PACS1-214ENST00000533811 BHLHE22Q8NFJ8 381 aaPredicted RBP7.78□□□□□ -1.16
PACS1-214ENST00000533811 OR6S1Q8NH40 331 aa7.78□□□□□ -1.16
PACS1-214ENST00000533811 OR6X1Q8NH79 312 aa7.78□□□□□ -1.16
PACS1-214ENST00000533811 AKR7LQ8NHP1 331 aa7.78□□□□□ -1.16
PACS1-214ENST00000533811 ABHD4Q8TB40 342 aa7.78□□□□□ -1.16
PACS1-214ENST00000533811 KLF14Q8TD94 323 aaPredicted RBP7.78□□□□□ -1.16
PACS1-214ENST00000533811 VPS33AQ96AX1 596 aa7.78□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 77.1 ms