RNA–Protein interactions for RNA: ENST00000533727.5

AMBRA1-211, Transcript of autophagy and beclin 1 regulator 1, humanhuman

TSL 1 (best) BASIC

Gene AMBRA1, Length 4,817 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-211ENST00000533727 TCFL5Q9UL49 500 aa10.29□□□□□ -0.76
AMBRA1-211ENST00000533727 LOC285556D6RIA3 1793 aa10.29□□□□□ -0.76
AMBRA1-211ENST00000533727 A0A0A6YYH2 397 aa10.28□□□□□ -0.76
AMBRA1-211ENST00000533727 RPS10-NUDT3A0A1W2PQS6 291 aa10.28□□□□□ -0.76
AMBRA1-211ENST00000533727 SERTM1A2A2V5 107 aa10.28□□□□□ -0.76
AMBRA1-211ENST00000533727 A6NJ64 397 aa10.28□□□□□ -0.76
AMBRA1-211ENST00000533727 HPGDSO60760 199 aa10.28□□□□□ -0.76
AMBRA1-211ENST00000533727 IGHV4-34P06331 123 aa10.28□□□□□ -0.76
AMBRA1-211ENST00000533727 CSF1P09603 554 aa10.28□□□□□ -0.76
AMBRA1-211ENST00000533727 FCARP24071 287 aa10.28□□□□□ -0.76
AMBRA1-211ENST00000533727 RPS10P46783 165 aaKnown RBP10.28□□□□□ -0.76
AMBRA1-211ENST00000533727 CXADRP78310 365 aa10.28□□□□□ -0.76
AMBRA1-211ENST00000533727 METAP1DQ6UB28 335 aaPredicted RBP10.28□□□□□ -0.76
AMBRA1-211ENST00000533727 ALKAL2Q6UX46 152 aa10.28□□□□□ -0.76
AMBRA1-211ENST00000533727 SPRED2Q7Z698 418 aa10.28□□□□□ -0.76
AMBRA1-211ENST00000533727 RETREG3Q86VR2 466 aa10.28□□□□□ -0.76
AMBRA1-211ENST00000533727 GLB1L2Q8IW92 636 aa10.28□□□□□ -0.76
AMBRA1-211ENST00000533727 PAQR8Q8TEZ7 354 aa10.28□□□□□ -0.76
AMBRA1-211ENST00000533727 DNASE2BQ8WZ79 361 aa10.28□□□□□ -0.76
AMBRA1-211ENST00000533727 FBXO8Q9NRD0 319 aa10.28□□□□□ -0.76
AMBRA1-211ENST00000533727 MED16Q9Y2X0 877 aa10.28□□□□□ -0.76
AMBRA1-211ENST00000533727 BTBD17A6NE02 478 aa10.28□□□□□ -0.76
AMBRA1-211ENST00000533727 M0R082 166 aa10.28□□□□□ -0.76
AMBRA1-211ENST00000533727 DLL1O00548 723 aa10.28□□□□□ -0.76
AMBRA1-211ENST00000533727 DOK2O60496 412 aa10.28□□□□□ -0.76
AMBRA1-211ENST00000533727 AKR7A3O95154 331 aa10.28□□□□□ -0.76
AMBRA1-211ENST00000533727 GALNSP34059 522 aa10.28□□□□□ -0.76
AMBRA1-211ENST00000533727 SYT14P1Q58G82 188 aa10.28□□□□□ -0.76
AMBRA1-211ENST00000533727 COX20Q5RI15 118 aa10.28□□□□□ -0.76
AMBRA1-211ENST00000533727 ESPNLQ6ZVH7 1005 aa10.28□□□□□ -0.76
AMBRA1-211ENST00000533727 LRRC28Q86X40 367 aaPredicted RBP10.28□□□□□ -0.76
AMBRA1-211ENST00000533727 CELF2-AS1Q8N7Q2 184 aa10.28□□□□□ -0.76
AMBRA1-211ENST00000533727 OR6T1Q8NGN1 323 aa10.28□□□□□ -0.76
AMBRA1-211ENST00000533727 OR56B4Q8NH76 319 aa10.28□□□□□ -0.76
AMBRA1-211ENST00000533727 RBPMSQ93062 196 aaKnown RBP10.28□□□□□ -0.76
AMBRA1-211ENST00000533727 KISS1RQ969F8 398 aaPredicted RBP10.28□□□□□ -0.76
AMBRA1-211ENST00000533727 SPIN2AQ99865 258 aa10.28□□□□□ -0.76
AMBRA1-211ENST00000533727 SPIN2BQ9BPZ2 258 aa10.28□□□□□ -0.76
AMBRA1-211ENST00000533727 NUDT9Q9BW91 350 aa10.28□□□□□ -0.76
AMBRA1-211ENST00000533727 METTL17Q9H7H0 456 aaPredicted RBP10.28□□□□□ -0.76
AMBRA1-211ENST00000533727 SYNPO2LQ9H987 977 aa10.28□□□□□ -0.76
AMBRA1-211ENST00000533727 PRDM7Q9NQW5 492 aa10.28□□□□□ -0.76
AMBRA1-211ENST00000533727 TXNL4BQ9NX01 149 aaKnown RBP10.28□□□□□ -0.76
AMBRA1-211ENST00000533727 SCN10AQ9Y5Y9 1956 aa10.28□□□□□ -0.76
AMBRA1-211ENST00000533727 UPK1AO00322 258 aa10.28□□□□□ -0.76
AMBRA1-211ENST00000533727 HMGN4O00479 90 aa10.28□□□□□ -0.76
AMBRA1-211ENST00000533727 CD160O95971 181 aa10.28□□□□□ -0.76
AMBRA1-211ENST00000533727 TBXA2RP21731 343 aa10.28□□□□□ -0.76
AMBRA1-211ENST00000533727 GABRA2P47869 451 aa10.28□□□□□ -0.76
AMBRA1-211ENST00000533727 TMPRSS3P57727 454 aa10.28□□□□□ -0.76
AMBRA1-211ENST00000533727 SLC23A3Q6PIS1 610 aa10.28□□□□□ -0.76
AMBRA1-211ENST00000533727 NPSR1Q6W5P4 371 aa10.28□□□□□ -0.76
AMBRA1-211ENST00000533727 SSX8Q7RTT4 187 aa10.28□□□□□ -0.76
AMBRA1-211ENST00000533727 PLPP5Q8NEB5 264 aa10.28□□□□□ -0.76
AMBRA1-211ENST00000533727 NUBPLQ8TB37 319 aa10.28□□□□□ -0.76
AMBRA1-211ENST00000533727 PHYHIPQ92561 330 aa10.28□□□□□ -0.76
AMBRA1-211ENST00000533727 DDA1Q9BW61 102 aa10.28□□□□□ -0.76
AMBRA1-211ENST00000533727 OR6C6A6NF89 314 aa10.28□□□□□ -0.76
AMBRA1-211ENST00000533727 FABP7O15540 132 aa10.28□□□□□ -0.76
AMBRA1-211ENST00000533727 ALPLP05186 524 aa10.28□□□□□ -0.76
AMBRA1-211ENST00000533727 PPP3CBP16298 524 aa10.28□□□□□ -0.76
AMBRA1-211ENST00000533727 ZNF26P17031 533 aaPredicted RBP10.28□□□□□ -0.76
AMBRA1-211ENST00000533727 MEOX1P50221 254 aa10.28□□□□□ -0.76
AMBRA1-211ENST00000533727 UBE2IP63279 158 aaKnown RBP10.28□□□□□ -0.76
AMBRA1-211ENST00000533727 ZNF528Q3MIS6 628 aa10.28□□□□□ -0.76
AMBRA1-211ENST00000533727 AVPI1Q5T686 147 aa10.28□□□□□ -0.76
AMBRA1-211ENST00000533727 S100A7AQ86SG5 101 aa10.28□□□□□ -0.76
AMBRA1-211ENST00000533727 ZNF546Q86UE3 836 aa10.28□□□□□ -0.76
AMBRA1-211ENST00000533727 GLRX2Q9NS18 164 aa10.28□□□□□ -0.76
AMBRA1-211ENST00000533727 PILRBQ9UKJ0 227 aa10.28□□□□□ -0.76
AMBRA1-211ENST00000533727 ZNF281Q9Y2X9 895 aa10.28□□□□□ -0.76
AMBRA1-211ENST00000533727 TIMM8BQ9Y5J9 83 aaPredicted RBP10.28□□□□□ -0.76
AMBRA1-211ENST00000533727 TRBV4-1A0A0J9YWV2 114 aa10.27□□□□□ -0.76
AMBRA1-211ENST00000533727 HMX2A2RU54 273 aa10.27□□□□□ -0.76
AMBRA1-211ENST00000533727 ZNF780AO75290 641 aaPredicted RBP10.27□□□□□ -0.76
AMBRA1-211ENST00000533727 GLCEO94923 617 aa10.27□□□□□ -0.76
AMBRA1-211ENST00000533727 OR8G3PP0DMU2 310 aa10.27□□□□□ -0.76
AMBRA1-211ENST00000533727 RAD52P43351 418 aa10.27□□□□□ -0.76
AMBRA1-211ENST00000533727 PXDC1Q5TGL8 231 aa10.27□□□□□ -0.76
AMBRA1-211ENST00000533727 PWWP2BQ6NUJ5 590 aa10.27□□□□□ -0.76
AMBRA1-211ENST00000533727 KLHDC8BQ8IXV7 354 aa10.27□□□□□ -0.76
AMBRA1-211ENST00000533727 ADAMTS14Q8WXS8 1223 aa10.27□□□□□ -0.76
AMBRA1-211ENST00000533727 OR14A2Q96R54 314 aa10.27□□□□□ -0.76
AMBRA1-211ENST00000533727 RTL8AQ9BWD3 113 aa10.27□□□□□ -0.76
AMBRA1-211ENST00000533727 OPA3Q9H6K4 179 aa10.27□□□□□ -0.76
AMBRA1-211ENST00000533727 NOX3Q9HBY0 568 aa10.27□□□□□ -0.76
AMBRA1-211ENST00000533727 VSX1Q9NZR4 365 aaPredicted RBP10.27□□□□□ -0.76
AMBRA1-211ENST00000533727 CDHR4A6H8M9 788 aa10.27□□□□□ -0.77
AMBRA1-211ENST00000533727 LIPCP11150 499 aa10.27□□□□□ -0.77
AMBRA1-211ENST00000533727 IL2RGP31785 369 aa10.27□□□□□ -0.77
AMBRA1-211ENST00000533727 FOXK2Q01167 660 aa10.27□□□□□ -0.77
AMBRA1-211ENST00000533727 ZNF169Q14929 603 aaPredicted RBP10.27□□□□□ -0.77
AMBRA1-211ENST00000533727 CSNK2A3Q8NEV1 391 aa10.27□□□□□ -0.77
AMBRA1-211ENST00000533727 BRIX1Q8TDN6 353 aaKnown RBP10.27□□□□□ -0.77
AMBRA1-211ENST00000533727 RBBP6Q7Z6E9 1792 aaKnown RBP10.27□□□□□ -0.77
AMBRA1-211ENST00000533727 PRSS44E7EML9 344 aa10.27□□□□□ -0.77
AMBRA1-211ENST00000533727 DBHP09172 617 aa10.27□□□□□ -0.77
AMBRA1-211ENST00000533727 DDOSTP39656 456 aa10.27□□□□□ -0.77
AMBRA1-211ENST00000533727 AKR1C2P52895 323 aa10.27□□□□□ -0.77
AMBRA1-211ENST00000533727 LGALS4P56470 323 aa10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms