RNA–Protein interactions for RNA: ENST00000532409.5

CTSB-225, Transcript of cathepsin B, humanhuman

TSL 2

Gene CTSB, Length 839 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-225ENST00000532409 TAF11Q15544 211 aa13.38□□□□□ -0.27
CTSB-225ENST00000532409 EFNB3Q15768 340 aa13.38□□□□□ -0.27
CTSB-225ENST00000532409 SGCAQ16586 387 aa13.38□□□□□ -0.27
CTSB-225ENST00000532409 MESTQ5EB52 335 aa13.38□□□□□ -0.27
CTSB-225ENST00000532409 ZER1Q7Z7L7 766 aa13.38□□□□□ -0.27
CTSB-225ENST00000532409 ARIH2OSQ8N7S6 290 aa13.38□□□□□ -0.27
CTSB-225ENST00000532409 IL17RDQ8NFM7 739 aa13.38□□□□□ -0.27
CTSB-225ENST00000532409 RASD2Q96D21 266 aa13.38□□□□□ -0.27
CTSB-225ENST00000532409 RSRC1Q96IZ7 334 aaKnown RBP13.38□□□□□ -0.27
CTSB-225ENST00000532409 CLPTM1LQ96KA5 538 aa13.38□□□□□ -0.27
CTSB-225ENST00000532409 FOXN4Q96NZ1 517 aa13.38□□□□□ -0.27
CTSB-225ENST00000532409 VRK1Q99986 396 aaPredicted RBP13.38□□□□□ -0.27
CTSB-225ENST00000532409 STX18Q9P2W9 335 aaKnown RBP13.38□□□□□ -0.27
CTSB-225ENST00000532409 PMF1-BGLAPU3KQ54 211 aa13.38□□□□□ -0.27
CTSB-225ENST00000532409 SONP18583 2426 aaKnown RBP13.38□□□□□ -0.27
CTSB-225ENST00000532409 TEX13CA0A0J9YWL9 993 aa13.37□□□□□ -0.27
CTSB-225ENST00000532409 TCRBV5S2A0A599 114 aa13.37□□□□□ -0.27
CTSB-225ENST00000532409 B9A039 149 aa13.37□□□□□ -0.27
CTSB-225ENST00000532409 GADD45GO95257 159 aa13.37□□□□□ -0.27
CTSB-225ENST00000532409 SCG5P05408 212 aa13.37□□□□□ -0.27
CTSB-225ENST00000532409 FABP3P05413 133 aa13.37□□□□□ -0.27
CTSB-225ENST00000532409 FAM157BP0CG42 384 aa13.37□□□□□ -0.27
CTSB-225ENST00000532409 ZNF32P17041 273 aa13.37□□□□□ -0.27
CTSB-225ENST00000532409 ITGA2P17301 1181 aa13.37□□□□□ -0.27
CTSB-225ENST00000532409 HOXB4P17483 251 aaPredicted RBP13.37□□□□□ -0.27
CTSB-225ENST00000532409 CALB2P22676 271 aa13.37□□□□□ -0.27
CTSB-225ENST00000532409 LAP3P28838 519 aa13.37□□□□□ -0.27
CTSB-225ENST00000532409 RRM2P31350 389 aa13.37□□□□□ -0.27
CTSB-225ENST00000532409 MNAT1P51948 309 aa13.37□□□□□ -0.27
CTSB-225ENST00000532409 EFNA4P52798 201 aa13.37□□□□□ -0.27
CTSB-225ENST00000532409 ANKDD1AQ495B1 522 aa13.37□□□□□ -0.27
CTSB-225ENST00000532409 SLC36A2Q495M3 483 aa13.37□□□□□ -0.27
CTSB-225ENST00000532409 FAM122BQ7Z309 247 aa13.37□□□□□ -0.27
CTSB-225ENST00000532409 LRP11Q86VZ4 500 aa13.37□□□□□ -0.27
CTSB-225ENST00000532409 ZDHHC21Q8IVQ6 265 aa13.37□□□□□ -0.27
CTSB-225ENST00000532409 CPEB3Q8NE35 698 aaKnown RBP13.37□□□□□ -0.27
CTSB-225ENST00000532409 SLC30A7Q8NEW0 376 aa13.37□□□□□ -0.27
CTSB-225ENST00000532409 OR10H5Q8NGA6 315 aa13.37□□□□□ -0.27
CTSB-225ENST00000532409 AKR7LQ8NHP1 331 aa13.37□□□□□ -0.27
CTSB-225ENST00000532409 MCUR1Q96AQ8 359 aa13.37□□□□□ -0.27
CTSB-225ENST00000532409 DOK1Q99704 481 aa13.37□□□□□ -0.27
CTSB-225ENST00000532409 SYT3Q9BQG1 590 aa13.37□□□□□ -0.27
CTSB-225ENST00000532409 MRPL37Q9BZE1 423 aaKnown RBP13.37□□□□□ -0.27
CTSB-225ENST00000532409 SIAEQ9HAT2 523 aa13.37□□□□□ -0.27
CTSB-225ENST00000532409 SMURF2Q9HAU4 748 aa13.37□□□□□ -0.27
CTSB-225ENST00000532409 IL1RAPQ9NPH3 570 aa13.37□□□□□ -0.27
CTSB-225ENST00000532409 A0A096LNT2 108 aa13.36□□□□□ -0.27
CTSB-225ENST00000532409 A0A1W2PPL8 197 aa13.36□□□□□ -0.27
CTSB-225ENST00000532409 UNC119BA6NIH7 251 aa13.36□□□□□ -0.27
CTSB-225ENST00000532409 A6NIZ1 184 aa13.36□□□□□ -0.27
CTSB-225ENST00000532409 SOCS2O14508 198 aa13.36□□□□□ -0.27
CTSB-225ENST00000532409 MGRN1O60291 552 aa13.36□□□□□ -0.27
CTSB-225ENST00000532409 NDUFB2O95178 105 aa13.36□□□□□ -0.27
CTSB-225ENST00000532409 BMP4P12644 408 aa13.36□□□□□ -0.27
CTSB-225ENST00000532409 APEX1P27695 318 aaKnown RBP13.36□□□□□ -0.27
CTSB-225ENST00000532409 RAP1BP61224 184 aa13.36□□□□□ -0.27
CTSB-225ENST00000532409 ERVS71-1P61550 626 aa13.36□□□□□ -0.27
CTSB-225ENST00000532409 RAP1AP62834 184 aa13.36□□□□□ -0.27
CTSB-225ENST00000532409 SPATS1Q496A3 300 aa13.36□□□□□ -0.27
CTSB-225ENST00000532409 NRN1LQ496H8 165 aa13.36□□□□□ -0.27
CTSB-225ENST00000532409 PABPC1L2AQ5JQF8 200 aa13.36□□□□□ -0.27
CTSB-225ENST00000532409 THEM4Q5T1C6 240 aa13.36□□□□□ -0.27
CTSB-225ENST00000532409 FAM205BPQ63HN1 556 aa13.36□□□□□ -0.27
CTSB-225ENST00000532409 TMEM53Q6P2H8 277 aa13.36□□□□□ -0.27
CTSB-225ENST00000532409 CLEC2AQ6UVW9 174 aa13.36□□□□□ -0.27
CTSB-225ENST00000532409 UGT2A3Q6UWM9 527 aa13.36□□□□□ -0.27
CTSB-225ENST00000532409 CCDC124Q96CT7 223 aaKnown RBP13.36□□□□□ -0.27
CTSB-225ENST00000532409 ZNF570Q96NI8 536 aa13.36□□□□□ -0.27
CTSB-225ENST00000532409 RBP7Q96R05 134 aa13.36□□□□□ -0.27
CTSB-225ENST00000532409 DENND2DQ9H6A0 471 aaPredicted RBP13.36□□□□□ -0.27
CTSB-225ENST00000532409 EMC7Q9NPA0 242 aa13.36□□□□□ -0.27
CTSB-225ENST00000532409 ACTR3BQ9P1U1 418 aa13.36□□□□□ -0.27
CTSB-225ENST00000532409 MYEF2Q9P2K5 600 aaKnown RBP13.36□□□□□ -0.27
CTSB-225ENST00000532409 GRHPRQ9UBQ7 328 aa13.36□□□□□ -0.27
CTSB-225ENST00000532409 AURKCQ9UQB9 309 aa13.36□□□□□ -0.27
CTSB-225ENST00000532409 HIVEP2P31629 2446 aa13.36□□□□□ -0.27
CTSB-225ENST00000532409 ABCA2Q9BZC7 2435 aa13.35□□□□□ -0.27
CTSB-225ENST00000532409 SLC22A23A1A5C7 686 aa13.35□□□□□ -0.27
CTSB-225ENST00000532409 PPP1R3DO95685 299 aa13.35□□□□□ -0.27
CTSB-225ENST00000532409 F12P00748 615 aaPredicted RBP13.35□□□□□ -0.27
CTSB-225ENST00000532409 CTLA4P16410 223 aa13.35□□□□□ -0.27
CTSB-225ENST00000532409 GLRXP35754 106 aa13.35□□□□□ -0.27
CTSB-225ENST00000532409 GALK2Q01415 458 aa13.35□□□□□ -0.27
CTSB-225ENST00000532409 PPP1R8Q12972 351 aaKnown RBP13.35□□□□□ -0.27
CTSB-225ENST00000532409 KRR1Q13601 381 aaKnown RBP13.35□□□□□ -0.27
CTSB-225ENST00000532409 MAD2L1BPQ15013 274 aaPredicted RBP13.35□□□□□ -0.27
CTSB-225ENST00000532409 PTCHD4Q6ZW05 846 aa13.35□□□□□ -0.27
CTSB-225ENST00000532409 MRPL24Q96A35 216 aaKnown RBP13.35□□□□□ -0.27
CTSB-225ENST00000532409 POM121Q96HA1 1249 aa13.35□□□□□ -0.27
CTSB-225ENST00000532409 RHNO1Q9BSD3 238 aa13.35□□□□□ -0.27
CTSB-225ENST00000532409 NRIP3Q9NQ35 241 aa13.35□□□□□ -0.27
CTSB-225ENST00000532409 TAS2R1Q9NYW7 299 aa13.35□□□□□ -0.27
CTSB-225ENST00000532409 CMAHPQ9Y471 501 aa13.35□□□□□ -0.27
CTSB-225ENST00000532409 IER3IP1Q9Y5U9 82 aa13.35□□□□□ -0.27
CTSB-225ENST00000532409 CHD3Q12873 2000 aaKnown RBP13.34□□□□□ -0.27
CTSB-225ENST00000532409 PRSS37A4D1T9 235 aa13.34□□□□□ -0.27
CTSB-225ENST00000532409 OR10H3O60404 316 aa13.34□□□□□ -0.27
CTSB-225ENST00000532409 ENTPD5O75356 428 aa13.34□□□□□ -0.27
CTSB-225ENST00000532409 UBOX5O94941 541 aa13.34□□□□□ -0.27
CTSB-225ENST00000532409 ADRA2AP08913 450 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms