RNA–Protein interactions for RNA: ENST00000532331.5

PTPRK-221, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRK, Length 5,757 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-221ENST00000532331 AGFG2O95081 481 aa10.31□□□□□ -0.76
PTPRK-221ENST00000532331 UBCP0CG48 685 aaKnown RBP10.31□□□□□ -0.76
PTPRK-221ENST00000532331 IKZF1Q13422 519 aa10.31□□□□□ -0.76
PTPRK-221ENST00000532331 SPCS2Q15005 226 aa10.31□□□□□ -0.76
PTPRK-221ENST00000532331 LTC4SQ16873 150 aa10.31□□□□□ -0.76
PTPRK-221ENST00000532331 LCN10Q6JVE6 187 aa10.31□□□□□ -0.76
PTPRK-221ENST00000532331 B3GLCTQ6Y288 498 aa10.31□□□□□ -0.76
PTPRK-221ENST00000532331 ZNF767PQ75MW2 155 aa10.31□□□□□ -0.76
PTPRK-221ENST00000532331 CPNE4Q96A23 557 aaPredicted RBP10.31□□□□□ -0.76
PTPRK-221ENST00000532331 INTS12Q96CB8 462 aaKnown RBP10.31□□□□□ -0.76
PTPRK-221ENST00000532331 TMEM100Q9NV29 134 aa10.31□□□□□ -0.76
PTPRK-221ENST00000532331 MED16Q9Y2X0 877 aa10.31□□□□□ -0.76
PTPRK-221ENST00000532331 HMX2A2RU54 273 aa10.31□□□□□ -0.76
PTPRK-221ENST00000532331 SOCS6O14544 535 aa10.31□□□□□ -0.76
PTPRK-221ENST00000532331 NCR1O76036 304 aa10.31□□□□□ -0.76
PTPRK-221ENST00000532331 HPP00738 406 aa10.31□□□□□ -0.76
PTPRK-221ENST00000532331 GM2AP17900 193 aa10.31□□□□□ -0.76
PTPRK-221ENST00000532331 VEGFCP49767 419 aa10.31□□□□□ -0.76
PTPRK-221ENST00000532331 RPS25P62851 125 aaKnown RBP10.31□□□□□ -0.76
PTPRK-221ENST00000532331 PRAMEF9Q5VWM5 478 aa10.31□□□□□ -0.76
PTPRK-221ENST00000532331 RHBDD2Q6NTF9 364 aa10.31□□□□□ -0.76
PTPRK-221ENST00000532331 ENTHD1Q8IYW4 607 aa10.31□□□□□ -0.76
PTPRK-221ENST00000532331 PARP16Q8N5Y8 322 aa10.31□□□□□ -0.76
PTPRK-221ENST00000532331 MSI2Q96DH6 328 aaKnown RBP10.31□□□□□ -0.76
PTPRK-221ENST00000532331 EMC6Q9BV81 110 aa10.31□□□□□ -0.76
PTPRK-221ENST00000532331 CD300AQ9UGN4 299 aa10.31□□□□□ -0.76
PTPRK-221ENST00000532331 TIMM10BQ9Y5J6 103 aa10.31□□□□□ -0.76
PTPRK-221ENST00000532331 GPR137BO60478 399 aa10.3□□□□□ -0.76
PTPRK-221ENST00000532331 HTR2BP41595 481 aa10.3□□□□□ -0.76
PTPRK-221ENST00000532331 SUMO3P55854 103 aaPredicted RBP10.3□□□□□ -0.76
PTPRK-221ENST00000532331 TMPRSS3P57727 454 aa10.3□□□□□ -0.76
PTPRK-221ENST00000532331 MSMO1Q15800 293 aa10.3□□□□□ -0.76
PTPRK-221ENST00000532331 DUSP7Q16829 419 aa10.3□□□□□ -0.76
PTPRK-221ENST00000532331 PRTGQ2VWP7 1150 aa10.3□□□□□ -0.76
PTPRK-221ENST00000532331 WDSUB1Q8N9V3 476 aa10.3□□□□□ -0.76
PTPRK-221ENST00000532331 KCNG3Q8TAE7 436 aa10.3□□□□□ -0.76
PTPRK-221ENST00000532331 TMEM106AQ96A25 262 aa10.3□□□□□ -0.76
PTPRK-221ENST00000532331 LRRC3BQ96PB8 259 aa10.3□□□□□ -0.76
PTPRK-221ENST00000532331 NIPSNAP1Q9BPW8 284 aa10.3□□□□□ -0.76
PTPRK-221ENST00000532331 MFFQ9GZY8 342 aa10.3□□□□□ -0.76
PTPRK-221ENST00000532331 MBD1Q9UIS9 605 aaPredicted RBP10.3□□□□□ -0.76
PTPRK-221ENST00000532331 TRAPPC2LQ9UL33 140 aa10.3□□□□□ -0.76
PTPRK-221ENST00000532331 MRPS28Q9Y2Q9 187 aaKnown RBP10.3□□□□□ -0.76
PTPRK-221ENST00000532331 SHOXO15266 292 aa10.3□□□□□ -0.76
PTPRK-221ENST00000532331 MSR1P21757 451 aa10.3□□□□□ -0.76
PTPRK-221ENST00000532331 IL3RAP26951 378 aa10.3□□□□□ -0.76
PTPRK-221ENST00000532331 CLDN6P56747 220 aa10.3□□□□□ -0.76
PTPRK-221ENST00000532331 TNK1Q13470 666 aa10.3□□□□□ -0.76
PTPRK-221ENST00000532331 FBXL14Q8N1E6 418 aa10.3□□□□□ -0.76
PTPRK-221ENST00000532331 SNX18Q96RF0 628 aa10.3□□□□□ -0.76
PTPRK-221ENST00000532331 TIMM8BQ9Y5J9 83 aaPredicted RBP10.3□□□□□ -0.76
PTPRK-221ENST00000532331 ENSAO43768 121 aaKnown RBP10.3□□□□□ -0.76
PTPRK-221ENST00000532331 SPDEFO95238 335 aa10.3□□□□□ -0.76
PTPRK-221ENST00000532331 LIPCP11150 499 aa10.3□□□□□ -0.76
PTPRK-221ENST00000532331 DLX5P56178 289 aa10.3□□□□□ -0.76
PTPRK-221ENST00000532331 EDDM3BP56851 147 aa10.3□□□□□ -0.76
PTPRK-221ENST00000532331 ALKBH1Q13686 389 aaKnown RBP10.3□□□□□ -0.76
PTPRK-221ENST00000532331 OR8G1Q15617 311 aa10.3□□□□□ -0.76
PTPRK-221ENST00000532331 ISXQ2M1V0 245 aa10.3□□□□□ -0.76
PTPRK-221ENST00000532331 WIPI1Q5MNZ9 446 aaPredicted RBP10.3□□□□□ -0.76
PTPRK-221ENST00000532331 DHRS4L2Q6PKH6 230 aa10.3□□□□□ -0.76
PTPRK-221ENST00000532331 OR5T1Q8NG75 326 aa10.3□□□□□ -0.76
PTPRK-221ENST00000532331 ARL11Q969Q4 196 aa10.3□□□□□ -0.76
PTPRK-221ENST00000532331 ITPKCQ96DU7 683 aa10.3□□□□□ -0.76
PTPRK-221ENST00000532331 OXGR1Q96P68 337 aa10.3□□□□□ -0.76
PTPRK-221ENST00000532331 SLC25A31Q9H0C2 315 aa10.3□□□□□ -0.76
PTPRK-221ENST00000532331 STEAP1Q9UHE8 339 aa10.3□□□□□ -0.76
PTPRK-221ENST00000532331 KLK4Q9Y5K2 254 aa10.3□□□□□ -0.76
PTPRK-221ENST00000532331 IGHV5-10-1A0A0J9YXX1 117 aa10.3□□□□□ -0.76
PTPRK-221ENST00000532331 PIP5K1CO60331 668 aa10.3□□□□□ -0.76
PTPRK-221ENST00000532331 QDPRP09417 244 aa10.3□□□□□ -0.76
PTPRK-221ENST00000532331 ETV6P41212 452 aa10.3□□□□□ -0.76
PTPRK-221ENST00000532331 MTNR1BP49286 362 aa10.3□□□□□ -0.76
PTPRK-221ENST00000532331 ZNF628Q5EBL2 1059 aa10.3□□□□□ -0.76
PTPRK-221ENST00000532331 CLVS2Q5SYC1 327 aa10.3□□□□□ -0.76
PTPRK-221ENST00000532331 APOOLQ6UXV4 268 aa10.3□□□□□ -0.76
PTPRK-221ENST00000532331 NCCRP1Q6ZVX7 275 aaPredicted RBP10.3□□□□□ -0.76
PTPRK-221ENST00000532331 ZNF808Q8N4W9 903 aaPredicted RBP10.3□□□□□ -0.76
PTPRK-221ENST00000532331 OR2Y1Q8NGV0 311 aa10.3□□□□□ -0.76
PTPRK-221ENST00000532331 RAB3CQ96E17 227 aa10.3□□□□□ -0.76
PTPRK-221ENST00000532331 ACKR4Q9NPB9 350 aa10.3□□□□□ -0.76
PTPRK-221ENST00000532331 GNG12Q9UBI6 72 aa10.3□□□□□ -0.76
PTPRK-221ENST00000532331 RCE1Q9Y256 329 aa10.3□□□□□ -0.76
PTPRK-221ENST00000532331 IGHV3-15A0A0B4J1V0 119 aa10.29□□□□□ -0.76
PTPRK-221ENST00000532331 SLC16A6O15403 523 aa10.29□□□□□ -0.76
PTPRK-221ENST00000532331 GLCEO94923 617 aa10.29□□□□□ -0.76
PTPRK-221ENST00000532331 LGI1O95970 557 aa10.29□□□□□ -0.76
PTPRK-221ENST00000532331 IFNA4P05014 189 aa10.29□□□□□ -0.76
PTPRK-221ENST00000532331 S100A12P80511 92 aa10.29□□□□□ -0.76
PTPRK-221ENST00000532331 PRSS42Q7Z5A4 293 aa10.29□□□□□ -0.76
PTPRK-221ENST00000532331 SCCPDHQ8NBX0 429 aa10.29□□□□□ -0.76
PTPRK-221ENST00000532331 OR4N2Q8NGD1 307 aa10.29□□□□□ -0.76
PTPRK-221ENST00000532331 UBQLN3Q9H347 655 aa10.29□□□□□ -0.76
PTPRK-221ENST00000532331 IGLV3-16A0A075B6K0 115 aa10.29□□□□□ -0.76
PTPRK-221ENST00000532331 A0A096LPE4 126 aa10.29□□□□□ -0.76
PTPRK-221ENST00000532331 A0A1W2PPZ6 126 aa10.29□□□□□ -0.76
PTPRK-221ENST00000532331 CEBPZOSA8MTT3 80 aa10.29□□□□□ -0.76
PTPRK-221ENST00000532331 SNRPBP14678 240 aaKnown RBP10.29□□□□□ -0.76
PTPRK-221ENST00000532331 MMP11P24347 488 aa10.29□□□□□ -0.76
PTPRK-221ENST00000532331 PTPN6P29350 595 aa10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms