RNA–Protein interactions for RNA: ENST00000531873.5

CD44-234, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 584 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-234ENST00000531873 SDR42E1Q8WUS8 393 aa2.05□□□□□ -2.08
CD44-234ENST00000531873 RDH5Q92781 318 aa2.05□□□□□ -2.08
CD44-234ENST00000531873 MYDGFQ969H8 173 aa2.05□□□□□ -2.08
CD44-234ENST00000531873 PIK3IP1Q96FE7 263 aa2.05□□□□□ -2.08
CD44-234ENST00000531873 IMMP1LQ96LU5 166 aa2.05□□□□□ -2.08
CD44-234ENST00000531873 OSBPL10Q9BXB5 764 aa2.05□□□□□ -2.08
CD44-234ENST00000531873 UCK2Q9BZX2 261 aa2.05□□□□□ -2.08
CD44-234ENST00000531873 ACTR3CQ9C0K3 210 aaPredicted RBP2.05□□□□□ -2.08
CD44-234ENST00000531873 IQCGQ9H095 443 aaKnown RBP2.05□□□□□ -2.08
CD44-234ENST00000531873 OR2AG1Q9H205 316 aa2.05□□□□□ -2.08
CD44-234ENST00000531873 RPF2Q9H7B2 306 aaKnown RBP2.05□□□□□ -2.08
CD44-234ENST00000531873 STOX2Q9P2F5 926 aaPredicted RBP2.05□□□□□ -2.08
CD44-234ENST00000531873 UXTQ9UBK9 157 aaPredicted RBP2.05□□□□□ -2.08
CD44-234ENST00000531873 LGALS13Q9UHV8 139 aa2.05□□□□□ -2.08
CD44-234ENST00000531873 TRAPPC4Q9Y296 219 aa2.05□□□□□ -2.08
CD44-234ENST00000531873 PLEKHG2Q9H7P9 1386 aa2.05□□□□□ -2.08
CD44-234ENST00000531873 NUP214P35658 2090 aaPredicted RBP2.05□□□□□ -2.08
CD44-234ENST00000531873 MROH7-TTC4A0A0A0MT08 1334 aa2.04□□□□□ -2.08
CD44-234ENST00000531873 A0A0B4J2A0 478 aa2.04□□□□□ -2.08
CD44-234ENST00000531873 A0A1B0GW55 424 aa2.04□□□□□ -2.08
CD44-234ENST00000531873 GJE1A6NN92 205 aa2.04□□□□□ -2.08
CD44-234ENST00000531873 HIDE1A8MVS5 230 aa2.04□□□□□ -2.08
CD44-234ENST00000531873 PANO1I0J062 215 aa2.04□□□□□ -2.08
CD44-234ENST00000531873 ZBTB5O15062 677 aa2.04□□□□□ -2.08
CD44-234ENST00000531873 ZNF861PO60384 105 aa2.04□□□□□ -2.08
CD44-234ENST00000531873 CLDN11O75508 207 aa2.04□□□□□ -2.08
CD44-234ENST00000531873 FCN3O75636 299 aa2.04□□□□□ -2.08
CD44-234ENST00000531873 CD160O95971 181 aa2.04□□□□□ -2.08
CD44-234ENST00000531873 OXTP01178 125 aa2.04□□□□□ -2.08
CD44-234ENST00000531873 COL2A1P02458 1487 aaPredicted RBP2.04□□□□□ -2.08
CD44-234ENST00000531873 KRTAP1-4P0C5Y4 121 aa2.04□□□□□ -2.08
CD44-234ENST00000531873 UBCP0CG48 685 aaKnown RBP2.04□□□□□ -2.08
CD44-234ENST00000531873 DUX4L2P0CJ85 424 aa2.04□□□□□ -2.08
CD44-234ENST00000531873 DUX4L3P0CJ86 424 aa2.04□□□□□ -2.08
CD44-234ENST00000531873 DUX4L4P0CJ87 422 aa2.04□□□□□ -2.08
CD44-234ENST00000531873 DUX4L5P0CJ88 424 aa2.04□□□□□ -2.08
CD44-234ENST00000531873 DUX4L6P0CJ89 424 aa2.04□□□□□ -2.08
CD44-234ENST00000531873 DUX4L7P0CJ90 424 aa2.04□□□□□ -2.08
CD44-234ENST00000531873 ZNF250P15622 560 aa2.04□□□□□ -2.08
CD44-234ENST00000531873 CTRB1P17538 263 aa2.04□□□□□ -2.08
CD44-234ENST00000531873 OR1E1P30953 314 aa2.04□□□□□ -2.08
CD44-234ENST00000531873 HRH1P35367 487 aa2.04□□□□□ -2.08
CD44-234ENST00000531873 GPX4P36969 197 aaPredicted RBP2.04□□□□□ -2.08
CD44-234ENST00000531873 NBL1P41271 181 aa2.04□□□□□ -2.08
CD44-234ENST00000531873 SLC1A2P43004 574 aa2.04□□□□□ -2.08
CD44-234ENST00000531873 UBE2MP61081 183 aaKnown RBP2.04□□□□□ -2.08
CD44-234ENST00000531873 LYZP61626 148 aa2.04□□□□□ -2.08
CD44-234ENST00000531873 NUTF2P61970 127 aaKnown RBP2.04□□□□□ -2.08
CD44-234ENST00000531873 SP4Q02446 784 aa2.04□□□□□ -2.08
CD44-234ENST00000531873 ECH1Q13011 328 aa2.04□□□□□ -2.08
CD44-234ENST00000531873 ORC2Q13416 577 aaPredicted RBP2.04□□□□□ -2.08
CD44-234ENST00000531873 PSG5Q15238 335 aa2.04□□□□□ -2.08
CD44-234ENST00000531873 SF3A2Q15428 464 aaKnown RBP2.04□□□□□ -2.08
CD44-234ENST00000531873 ZNF79Q15937 498 aa2.04□□□□□ -2.08
CD44-234ENST00000531873 GUCA2BQ16661 112 aa2.04□□□□□ -2.08
CD44-234ENST00000531873 PGGHGQ32M88 737 aa2.04□□□□□ -2.08
CD44-234ENST00000531873 DUX4L9Q6RFH8 374 aaPredicted RBP2.04□□□□□ -2.08
CD44-234ENST00000531873 FAM122BQ7Z309 247 aa2.04□□□□□ -2.08
CD44-234ENST00000531873 CBLN2Q8IUK8 224 aa2.04□□□□□ -2.08
CD44-234ENST00000531873 ZNF584Q8IVC4 421 aa2.04□□□□□ -2.08
CD44-234ENST00000531873 MICU2Q8IYU8 434 aa2.04□□□□□ -2.08
CD44-234ENST00000531873 ZFP41Q8N8Y5 198 aa2.04□□□□□ -2.08
CD44-234ENST00000531873 TTC29Q8NA56 475 aaPredicted RBP2.04□□□□□ -2.08
CD44-234ENST00000531873 LRRC75AQ8NAA5 344 aa2.04□□□□□ -2.08
CD44-234ENST00000531873 OR10G9Q8NGN4 311 aa2.04□□□□□ -2.08
CD44-234ENST00000531873 OR1N2Q8NGR9 330 aa2.04□□□□□ -2.08
CD44-234ENST00000531873 CEMIPQ8WUJ3 1361 aa2.04□□□□□ -2.08
CD44-234ENST00000531873 GSDMAQ96QA5 445 aa2.04□□□□□ -2.08
CD44-234ENST00000531873 OR2M2Q96R28 347 aa2.04□□□□□ -2.08
CD44-234ENST00000531873 GABARAPL3Q9BY60 117 aa2.04□□□□□ -2.08
CD44-234ENST00000531873 BLZF1Q9H2G9 400 aa2.04□□□□□ -2.08
CD44-234ENST00000531873 TDRD3Q9H7E2 651 aaKnown RBP2.04□□□□□ -2.08
CD44-234ENST00000531873 FANCEQ9HB96 536 aa2.04□□□□□ -2.08
CD44-234ENST00000531873 BEX1Q9HBH7 125 aa2.04□□□□□ -2.08
CD44-234ENST00000531873 SLCO1B3Q9NPD5 702 aa2.04□□□□□ -2.08
CD44-234ENST00000531873 CCDC59Q9P031 241 aaKnown RBP2.04□□□□□ -2.08
CD44-234ENST00000531873 MYEF2Q9P2K5 600 aaKnown RBP2.04□□□□□ -2.08
CD44-234ENST00000531873 DUX4Q9UBX2 424 aa2.04□□□□□ -2.08
CD44-234ENST00000531873 SHPKQ9UHJ6 478 aa2.04□□□□□ -2.08
CD44-234ENST00000531873 TP53TG3Q9ULZ0 132 aa2.04□□□□□ -2.08
CD44-234ENST00000531873 ST3GAL6Q9Y274 331 aa2.04□□□□□ -2.08
CD44-234ENST00000531873 TP53TG5Q9Y2B4 290 aa2.04□□□□□ -2.08
CD44-234ENST00000531873 PRG3Q9Y2Y8 225 aaPredicted RBP2.04□□□□□ -2.08
CD44-234ENST00000531873 TRAV39A0A0B4J263 110 aa2.03□□□□□ -2.08
CD44-234ENST00000531873 PRSS37A4D1T9 235 aa2.03□□□□□ -2.08
CD44-234ENST00000531873 ZNF99A8MXY4 864 aaPredicted RBP2.03□□□□□ -2.08
CD44-234ENST00000531873 PEX7O00628 323 aa2.03□□□□□ -2.08
CD44-234ENST00000531873 ICOSLGO75144 302 aa2.03□□□□□ -2.08
CD44-234ENST00000531873 CCNB2O95067 398 aa2.03□□□□□ -2.08
CD44-234ENST00000531873 SCELO95171 688 aa2.03□□□□□ -2.08
CD44-234ENST00000531873 KLF8O95600 359 aaPredicted RBP2.03□□□□□ -2.08
CD44-234ENST00000531873 OTCP00480 354 aa2.03□□□□□ -2.08
CD44-234ENST00000531873 INSP01308 110 aa2.03□□□□□ -2.08
CD44-234ENST00000531873 IGLV1-47P01700 117 aa2.03□□□□□ -2.08
CD44-234ENST00000531873 HLA-HP01893 362 aa2.03□□□□□ -2.08
CD44-234ENST00000531873 IFNW1P05000 195 aa2.03□□□□□ -2.08
CD44-234ENST00000531873 GIPP09681 153 aaPredicted RBP2.03□□□□□ -2.08
CD44-234ENST00000531873 CT45A6P0DMU7 189 aa2.03□□□□□ -2.08
CD44-234ENST00000531873 CT45A5P0DMU8 189 aa2.03□□□□□ -2.08
CD44-234ENST00000531873 CT45A7P0DMV0 189 aa2.03□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms