RNA–Protein interactions for RNA: ENST00000528672.1

CD44-229, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 4

Gene CD44, Length 586 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-229ENST00000528672 NABP1Q96AH0 204 aa2.71□□□□□ -1.98
CD44-229ENST00000528672 TM4SF19Q96DZ7 209 aa2.71□□□□□ -1.98
CD44-229ENST00000528672 CMTM5Q96DZ9 223 aa2.71□□□□□ -1.98
CD44-229ENST00000528672 RAB3CQ96E17 227 aa2.71□□□□□ -1.98
CD44-229ENST00000528672 TMEM80Q96HE8 168 aa2.71□□□□□ -1.98
CD44-229ENST00000528672 PPP1R16AQ96I34 528 aa2.71□□□□□ -1.98
CD44-229ENST00000528672 RILPQ96NA2 401 aa2.71□□□□□ -1.98
CD44-229ENST00000528672 ZNF285Q96NJ3 590 aa2.71□□□□□ -1.98
CD44-229ENST00000528672 SERPINB12Q96P63 405 aa2.71□□□□□ -1.98
CD44-229ENST00000528672 OR5B2Q96R09 309 aa2.71□□□□□ -1.98
CD44-229ENST00000528672 LGMNQ99538 433 aa2.71□□□□□ -1.98
CD44-229ENST00000528672 EBNA1BP2Q99848 306 aaKnown RBP2.71□□□□□ -1.98
CD44-229ENST00000528672 SLC6A7Q99884 636 aa2.71□□□□□ -1.98
CD44-229ENST00000528672 ZNF2Q9BSG1 426 aaPredicted RBP2.71□□□□□ -1.98
CD44-229ENST00000528672 NICN1Q9BSH3 213 aa2.71□□□□□ -1.98
CD44-229ENST00000528672 PCBD2Q9H0N5 130 aa2.71□□□□□ -1.98
CD44-229ENST00000528672 NXF5Q9H1B4 397 aaKnown RBP2.71□□□□□ -1.98
CD44-229ENST00000528672 MOB1AQ9H8S9 216 aa2.71□□□□□ -1.98
CD44-229ENST00000528672 POLE4Q9NR33 117 aa2.71□□□□□ -1.98
CD44-229ENST00000528672 OPN4Q9UHM6 478 aa2.71□□□□□ -1.98
CD44-229ENST00000528672 SMPXQ9UHP9 88 aa2.71□□□□□ -1.98
CD44-229ENST00000528672 ZNF639Q9UID6 485 aa2.71□□□□□ -1.98
CD44-229ENST00000528672 STOML2Q9UJZ1 356 aa2.71□□□□□ -1.98
CD44-229ENST00000528672 FBXL3Q9UKT7 428 aa2.71□□□□□ -1.98
CD44-229ENST00000528672 RARRES3Q9UL19 164 aa2.71□□□□□ -1.98
CD44-229ENST00000528672 ARL2BPQ9Y2Y0 163 aa2.71□□□□□ -1.98
CD44-229ENST00000528672 PRG3Q9Y2Y8 225 aaPredicted RBP2.71□□□□□ -1.98
CD44-229ENST00000528672 ZNF337Q9Y3M9 751 aa2.71□□□□□ -1.98
CD44-229ENST00000528672 NPTNQ9Y639 398 aa2.71□□□□□ -1.98
CD44-229ENST00000528672 KPTNQ9Y664 436 aa2.71□□□□□ -1.98
CD44-229ENST00000528672 AUP1Q9Y679 476 aa2.71□□□□□ -1.98
CD44-229ENST00000528672 CLUHO75153 1309 aa2.7□□□□□ -1.98
CD44-229ENST00000528672 ZFYVE9O95405 1425 aa2.7□□□□□ -1.98
CD44-229ENST00000528672 ERICH3Q5RHP9 1530 aa2.7□□□□□ -1.98
CD44-229ENST00000528672 TRGV8A0A0C4DH27 118 aa2.7□□□□□ -1.98
CD44-229ENST00000528672 A0A1B0GVL5 298 aa2.7□□□□□ -1.98
CD44-229ENST00000528672 TMEM213A2RRL7 107 aa2.7□□□□□ -1.98
CD44-229ENST00000528672 METTL15A6NJ78 407 aa2.7□□□□□ -1.98
CD44-229ENST00000528672 MPTX1A8MV57 137 aa2.7□□□□□ -1.98
CD44-229ENST00000528672 C9JVG2 144 aa2.7□□□□□ -1.98
CD44-229ENST00000528672 ANKRD65E5RJM6 399 aa2.7□□□□□ -1.98
CD44-229ENST00000528672 H3BN98 237 aa2.7□□□□□ -1.98
CD44-229ENST00000528672 PDHXO00330 501 aa2.7□□□□□ -1.98
CD44-229ENST00000528672 MSH4O15457 936 aa2.7□□□□□ -1.98
CD44-229ENST00000528672 H6PDO95479 791 aa2.7□□□□□ -1.98
CD44-229ENST00000528672 DUS4LO95620 317 aaKnown RBP2.7□□□□□ -1.98
CD44-229ENST00000528672 IFNGP01579 166 aa2.7□□□□□ -1.98
CD44-229ENST00000528672 IGKV3-20P01619 116 aa2.7□□□□□ -1.98
CD44-229ENST00000528672 IGHG1P01857 330 aa2.7□□□□□ -1.98
CD44-229ENST00000528672 PPBPP02775 128 aa2.7□□□□□ -1.98
CD44-229ENST00000528672 FTH1P02794 183 aa2.7□□□□□ -1.98
CD44-229ENST00000528672 FBP1P09467 338 aa2.7□□□□□ -1.98
CD44-229ENST00000528672 H2BFMP0C1H6 154 aa2.7□□□□□ -1.98
CD44-229ENST00000528672 UBCP0CG48 685 aaKnown RBP2.7□□□□□ -1.98
CD44-229ENST00000528672 THRAP10827 490 aa2.7□□□□□ -1.98
CD44-229ENST00000528672 CD1EP15812 388 aa2.7□□□□□ -1.98
CD44-229ENST00000528672 ACADSP16219 412 aa2.7□□□□□ -1.98
CD44-229ENST00000528672 NCK1P16333 377 aa2.7□□□□□ -1.98
CD44-229ENST00000528672 F8A1P23610 371 aa2.7□□□□□ -1.98
CD44-229ENST00000528672 IGFBP5P24593 272 aa2.7□□□□□ -1.98
CD44-229ENST00000528672 ELK4P28324 431 aa2.7□□□□□ -1.98
CD44-229ENST00000528672 GTF2E2P29084 291 aaKnown RBP2.7□□□□□ -1.98
CD44-229ENST00000528672 RCVRNP35243 200 aa2.7□□□□□ -1.98
CD44-229ENST00000528672 UGT2B10P36537 528 aa2.7□□□□□ -1.98
CD44-229ENST00000528672 AQP2P41181 271 aa2.7□□□□□ -1.98
CD44-229ENST00000528672 MAP3K8P41279 467 aa2.7□□□□□ -1.98
CD44-229ENST00000528672 GNPDA1P46926 289 aa2.7□□□□□ -1.98
CD44-229ENST00000528672 RGS6P49758 472 aa2.7□□□□□ -1.98
CD44-229ENST00000528672 TPMTP51580 245 aa2.7□□□□□ -1.98
CD44-229ENST00000528672 MFAP2P55001 183 aa2.7□□□□□ -1.98
CD44-229ENST00000528672 LSM6P62312 80 aaKnown RBP2.7□□□□□ -1.98
CD44-229ENST00000528672 ELF3P78545 371 aaPredicted RBP2.7□□□□□ -1.98
CD44-229ENST00000528672 CCL7P80098 99 aa2.7□□□□□ -1.98
CD44-229ENST00000528672 PITPNAQ00169 270 aa2.7□□□□□ -1.98
CD44-229ENST00000528672 FKBP3Q00688 224 aaKnown RBP2.7□□□□□ -1.98
CD44-229ENST00000528672 PAX5Q02548 391 aa2.7□□□□□ -1.98
CD44-229ENST00000528672 BAMBIQ13145 260 aa2.7□□□□□ -1.98
CD44-229ENST00000528672 DPYSL3Q14195 570 aa2.7□□□□□ -1.98
CD44-229ENST00000528672 ZNF146Q15072 292 aa2.7□□□□□ -1.98
CD44-229ENST00000528672 TMED2Q15363 201 aa2.7□□□□□ -1.98
CD44-229ENST00000528672 ZIC1Q15915 447 aa2.7□□□□□ -1.98
CD44-229ENST00000528672 MS4A18Q3C1V0 323 aa2.7□□□□□ -1.98
CD44-229ENST00000528672 PAN3Q58A45 887 aaKnown RBP2.7□□□□□ -1.98
CD44-229ENST00000528672 DCST2Q5T1A1 773 aa2.7□□□□□ -1.98
CD44-229ENST00000528672 FAM219BQ5XKK7 198 aa2.7□□□□□ -1.98
CD44-229ENST00000528672 OR8G2PQ6IF36 304 aa2.7□□□□□ -1.98
CD44-229ENST00000528672 RPL13AP3Q6NVV1 102 aa2.7□□□□□ -1.98
CD44-229ENST00000528672 GDPGP1Q6ZNW5 385 aa2.7□□□□□ -1.98
CD44-229ENST00000528672 APTXQ7Z2E3 356 aaKnown RBP2.7□□□□□ -1.98
CD44-229ENST00000528672 MRPL21Q7Z2W9 205 aaKnown RBP2.7□□□□□ -1.98
CD44-229ENST00000528672 S100A7AQ86SG5 101 aa2.7□□□□□ -1.98
CD44-229ENST00000528672 ZNF546Q86UE3 836 aa2.7□□□□□ -1.98
CD44-229ENST00000528672 TGIF2LXQ8IUE1 241 aa2.7□□□□□ -1.98
CD44-229ENST00000528672 ZFP82Q8N141 532 aa2.7□□□□□ -1.98
CD44-229ENST00000528672 BPIFB2Q8N4F0 458 aa2.7□□□□□ -1.98
CD44-229ENST00000528672 KIF2BQ8N4N8 673 aa2.7□□□□□ -1.98
CD44-229ENST00000528672 CCDC54Q8NEL0 328 aa2.7□□□□□ -1.98
CD44-229ENST00000528672 OR2T6Q8NHC8 308 aa2.7□□□□□ -1.98
CD44-229ENST00000528672 C11orf45Q8TAV5 145 aa2.7□□□□□ -1.98
CD44-229ENST00000528672 AENQ8WTP8 325 aaKnown RBP2.7□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms