RNA–Protein interactions for RNA: ENST00000527720.5

USH1C-207, Transcript of USH1 protein network component harmonin, humanhuman

TSL 1 (best) BASIC

Gene USH1C, Length 2,278 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-207ENST00000527720 KIF26BQ2KJY2 2108 aa13.79□□□□□ -0.2
USH1C-207ENST00000527720 CCDC163A0A0D9SF12 145 aa13.79□□□□□ -0.2
USH1C-207ENST00000527720 CPED1A4D0V7 1026 aa13.79□□□□□ -0.2
USH1C-207ENST00000527720 SOX1O00570 391 aaPredicted RBP13.79□□□□□ -0.2
USH1C-207ENST00000527720 EMP2P54851 167 aa13.79□□□□□ -0.2
USH1C-207ENST00000527720 TAS2R20P59543 309 aa13.79□□□□□ -0.2
USH1C-207ENST00000527720 EIF2B1Q14232 305 aaKnown RBP13.79□□□□□ -0.2
USH1C-207ENST00000527720 ZNF385CQ66K41 422 aaPredicted RBP13.79□□□□□ -0.2
USH1C-207ENST00000527720 GUSBP11Q6P575 273 aa13.79□□□□□ -0.2
USH1C-207ENST00000527720 OR11H7Q8NGC8 314 aa13.79□□□□□ -0.2
USH1C-207ENST00000527720 OR52N5Q8NH56 324 aa13.79□□□□□ -0.2
USH1C-207ENST00000527720 PHF21AQ96BD5 680 aa13.79□□□□□ -0.2
USH1C-207ENST00000527720 ABHD6Q9BV23 337 aa13.79□□□□□ -0.2
USH1C-207ENST00000527720 POTEKPQ9BYX7 375 aa13.79□□□□□ -0.2
USH1C-207ENST00000527720 FANCFQ9NPI8 374 aa13.79□□□□□ -0.2
USH1C-207ENST00000527720 LY6G6EA0A0G2JKS1 128 aa13.79□□□□□ -0.2
USH1C-207ENST00000527720 TRBV11-1A0A0K0K1C0 115 aa13.79□□□□□ -0.2
USH1C-207ENST00000527720 A0A1W2PQM1 296 aa13.79□□□□□ -0.2
USH1C-207ENST00000527720 XRCC3O43542 346 aa13.79□□□□□ -0.2
USH1C-207ENST00000527720 ZNF354AO60765 605 aaPredicted RBP13.79□□□□□ -0.2
USH1C-207ENST00000527720 PEX14O75381 377 aa13.79□□□□□ -0.2
USH1C-207ENST00000527720 KHDRBS3O75525 346 aaKnown RBP13.79□□□□□ -0.2
USH1C-207ENST00000527720 GLSO94925 669 aaPredicted RBP13.79□□□□□ -0.2
USH1C-207ENST00000527720 TIAF1O95411 115 aa13.79□□□□□ -0.2
USH1C-207ENST00000527720 DCNP07585 359 aaKnown RBP13.79□□□□□ -0.2
USH1C-207ENST00000527720 PSMB1P20618 241 aaKnown RBP13.79□□□□□ -0.2
USH1C-207ENST00000527720 PTGS2P35354 604 aa13.79□□□□□ -0.2
USH1C-207ENST00000527720 MELKQ14680 651 aa13.79□□□□□ -0.2
USH1C-207ENST00000527720 STPG1Q5TH74 334 aa13.79□□□□□ -0.2
USH1C-207ENST00000527720 C16orf47Q6ZP98 133 aaPredicted RBP13.79□□□□□ -0.2
USH1C-207ENST00000527720 CPEB2Q7Z5Q1 589 aaKnown RBP13.79□□□□□ -0.2
USH1C-207ENST00000527720 CATSPERDQ86XM0 798 aa13.79□□□□□ -0.2
USH1C-207ENST00000527720 DNAAF1Q8NEP3 725 aa13.79□□□□□ -0.2
USH1C-207ENST00000527720 GIMAP1Q8WWP7 306 aa13.79□□□□□ -0.2
USH1C-207ENST00000527720 WDR77Q9BQA1 342 aaPredicted RBP13.79□□□□□ -0.2
USH1C-207ENST00000527720 ULBP3Q9BZM4 244 aa13.79□□□□□ -0.2
USH1C-207ENST00000527720 U3KQA8 63 aa13.79□□□□□ -0.2
USH1C-207ENST00000527720 IGHV5-10-1A0A0J9YXX1 117 aa13.78□□□□□ -0.2
USH1C-207ENST00000527720 A0A1B0GVI7 797 aa13.78□□□□□ -0.2
USH1C-207ENST00000527720 TMEM200CA6NKL6 621 aa13.78□□□□□ -0.2
USH1C-207ENST00000527720 NPIPA5E9PKD4 350 aa13.78□□□□□ -0.2
USH1C-207ENST00000527720 FABP7O15540 132 aa13.78□□□□□ -0.2
USH1C-207ENST00000527720 ZNF780AO75290 641 aaPredicted RBP13.78□□□□□ -0.2
USH1C-207ENST00000527720 TGM6O95932 706 aa13.78□□□□□ -0.2
USH1C-207ENST00000527720 HOXA6P31267 233 aa13.78□□□□□ -0.2
USH1C-207ENST00000527720 CCKBRP32239 447 aa13.78□□□□□ -0.2
USH1C-207ENST00000527720 FOXL2P58012 376 aa13.78□□□□□ -0.2
USH1C-207ENST00000527720 CCL7P80098 99 aa13.78□□□□□ -0.2
USH1C-207ENST00000527720 ETFDHQ16134 617 aa13.78□□□□□ -0.2
USH1C-207ENST00000527720 PCK2Q16822 640 aa13.78□□□□□ -0.2
USH1C-207ENST00000527720 BTBD16Q32M84 506 aa13.78□□□□□ -0.2
USH1C-207ENST00000527720 SLC25A53Q5H9E4 307 aa13.78□□□□□ -0.2
USH1C-207ENST00000527720 OR5M10Q6IEU7 315 aa13.78□□□□□ -0.2
USH1C-207ENST00000527720 MTFR2Q6P444 385 aa13.78□□□□□ -0.2
USH1C-207ENST00000527720 MAMSTRQ6ZN01 415 aa13.78□□□□□ -0.2
USH1C-207ENST00000527720 CREB3L2Q70SY1 520 aa13.78□□□□□ -0.2
USH1C-207ENST00000527720 SAP25Q8TEE9 199 aa13.78□□□□□ -0.2
USH1C-207ENST00000527720 ATOH1Q92858 354 aaPredicted RBP13.78□□□□□ -0.2
USH1C-207ENST00000527720 SLC26A1Q9H2B4 701 aa13.78□□□□□ -0.2
USH1C-207ENST00000527720 CHST11Q9NPF2 352 aa13.78□□□□□ -0.2
USH1C-207ENST00000527720 SLC17A5Q9NRA2 495 aa13.78□□□□□ -0.2
USH1C-207ENST00000527720 C19orf25Q9UFG5 118 aaPredicted RBP13.78□□□□□ -0.2
USH1C-207ENST00000527720 NPIPA1Q9UND3 350 aa13.78□□□□□ -0.2
USH1C-207ENST00000527720 COA3Q9Y2R0 106 aaPredicted RBP13.78□□□□□ -0.2
USH1C-207ENST00000527720 USP34Q70CQ2 3546 aa13.78□□□□□ -0.2
USH1C-207ENST00000527720 IGLV3-32A0A0A0MS00 114 aa13.78□□□□□ -0.2
USH1C-207ENST00000527720 AQP8O94778 261 aa13.78□□□□□ -0.2
USH1C-207ENST00000527720 SULT1A3P0DMM9 295 aa13.78□□□□□ -0.2
USH1C-207ENST00000527720 SULT1A4P0DMN0 295 aa13.78□□□□□ -0.2
USH1C-207ENST00000527720 DHPSP49366 369 aaPredicted RBP13.78□□□□□ -0.2
USH1C-207ENST00000527720 OR7A5Q15622 319 aa13.78□□□□□ -0.2
USH1C-207ENST00000527720 LAMTOR1Q6IAA8 161 aa13.78□□□□□ -0.2
USH1C-207ENST00000527720 ANKRD16Q6P6B7 361 aa13.78□□□□□ -0.2
USH1C-207ENST00000527720 TMEM205Q6UW68 189 aa13.78□□□□□ -0.2
USH1C-207ENST00000527720 LUZP2Q86TE4 346 aa13.78□□□□□ -0.2
USH1C-207ENST00000527720 SLC26A10Q8NG04 563 aa13.78□□□□□ -0.2
USH1C-207ENST00000527720 OR11G2Q8NGC1 345 aa13.78□□□□□ -0.2
USH1C-207ENST00000527720 KCNK17Q96T54 332 aa13.78□□□□□ -0.2
USH1C-207ENST00000527720 SDHAF3Q9NRP4 125 aa13.78□□□□□ -0.2
USH1C-207ENST00000527720 KLK11Q9UBX7 282 aa13.78□□□□□ -0.2
USH1C-207ENST00000527720 DHDHQ9UQ10 334 aa13.78□□□□□ -0.2
USH1C-207ENST00000527720 LRP12Q9Y561 859 aa13.78□□□□□ -0.2
USH1C-207ENST00000527720 SLC17A2O00624 439 aa13.77□□□□□ -0.21
USH1C-207ENST00000527720 GMDSO60547 372 aa13.77□□□□□ -0.21
USH1C-207ENST00000527720 ZFAND5O76080 213 aa13.77□□□□□ -0.21
USH1C-207ENST00000527720 PNPP00491 289 aa13.77□□□□□ -0.21
USH1C-207ENST00000527720 CD2P06729 351 aa13.77□□□□□ -0.21
USH1C-207ENST00000527720 HLA-DOBP13765 273 aa13.77□□□□□ -0.21
USH1C-207ENST00000527720 ZNF823P16415 610 aa13.77□□□□□ -0.21
USH1C-207ENST00000527720 FSTP19883 344 aa13.77□□□□□ -0.21
USH1C-207ENST00000527720 TOMM20Q15388 145 aa13.77□□□□□ -0.21
USH1C-207ENST00000527720 ST3GAL2Q16842 350 aa13.77□□□□□ -0.21
USH1C-207ENST00000527720 ODF4Q2M2E3 257 aa13.77□□□□□ -0.21
USH1C-207ENST00000527720 DEGS2Q6QHC5 323 aa13.77□□□□□ -0.21
USH1C-207ENST00000527720 THAP3Q8WTV1 239 aaPredicted RBP13.77□□□□□ -0.21
USH1C-207ENST00000527720 NAT6Q93015 286 aa13.77□□□□□ -0.21
USH1C-207ENST00000527720 ARL5BQ96KC2 179 aa13.77□□□□□ -0.21
USH1C-207ENST00000527720 MRGPRX4Q96LA9 322 aa13.77□□□□□ -0.21
USH1C-207ENST00000527720 FOXN4Q96NZ1 517 aa13.77□□□□□ -0.21
USH1C-207ENST00000527720 ALKBH4Q9NXW9 302 aa13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms