RNA–Protein interactions for RNA: ENST00000527299.1

CLNS1A-209, Transcript of chloride nucleotide-sensitive channel 1A, humanhuman

TSL 2

Gene CLNS1A, Length 387 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLNS1A-209ENST00000527299 CLCC1Q96S66 551 aa3.34□□□□□ -1.87
CLNS1A-209ENST00000527299 MACROD1Q9BQ69 325 aa3.34□□□□□ -1.87
CLNS1A-209ENST00000527299 FAM110AQ9BQ89 295 aa3.34□□□□□ -1.87
CLNS1A-209ENST00000527299 TMEM47Q9BQJ4 181 aa3.34□□□□□ -1.87
CLNS1A-209ENST00000527299 UTP23Q9BRU9 249 aaKnown RBP3.34□□□□□ -1.87
CLNS1A-209ENST00000527299 SLC35A5Q9BS91 424 aa3.34□□□□□ -1.87
CLNS1A-209ENST00000527299 ADAT1Q9BUB4 502 aaKnown RBP3.34□□□□□ -1.87
CLNS1A-209ENST00000527299 RIOK2Q9BVS4 552 aaKnown RBP3.34□□□□□ -1.87
CLNS1A-209ENST00000527299 GATA5Q9BWX5 397 aaPredicted RBP3.34□□□□□ -1.87
CLNS1A-209ENST00000527299 ARV1Q9H2C2 271 aa3.34□□□□□ -1.87
CLNS1A-209ENST00000527299 DPEP2Q9H4A9 486 aa3.34□□□□□ -1.87
CLNS1A-209ENST00000527299 CDCP1Q9H5V8 836 aa3.34□□□□□ -1.87
CLNS1A-209ENST00000527299 RNF167Q9H6Y7 350 aa3.34□□□□□ -1.87
CLNS1A-209ENST00000527299 METTL17Q9H7H0 456 aaPredicted RBP3.34□□□□□ -1.87
CLNS1A-209ENST00000527299 SMURF2Q9HAU4 748 aa3.34□□□□□ -1.87
CLNS1A-209ENST00000527299 NOX3Q9HBY0 568 aa3.34□□□□□ -1.87
CLNS1A-209ENST00000527299 UQCC1Q9NVA1 299 aa3.34□□□□□ -1.87
CLNS1A-209ENST00000527299 BARHL2Q9NY43 387 aa3.34□□□□□ -1.87
CLNS1A-209ENST00000527299 PIPOXQ9P0Z9 390 aa3.34□□□□□ -1.87
CLNS1A-209ENST00000527299 DOK5Q9P104 306 aa3.34□□□□□ -1.87
CLNS1A-209ENST00000527299 KLHL13Q9P2N7 655 aa3.34□□□□□ -1.87
CLNS1A-209ENST00000527299 RHCGQ9UBD6 479 aa3.34□□□□□ -1.87
CLNS1A-209ENST00000527299 COMMD3Q9UBI1 195 aa3.34□□□□□ -1.87
CLNS1A-209ENST00000527299 HSPB7Q9UBY9 170 aa3.34□□□□□ -1.87
CLNS1A-209ENST00000527299 ZNF223Q9UK11 482 aaPredicted RBP3.34□□□□□ -1.87
CLNS1A-209ENST00000527299 ZNF346Q9UL40 294 aaKnown RBP3.34□□□□□ -1.87
CLNS1A-209ENST00000527299 A4GNTQ9UNA3 340 aa3.34□□□□□ -1.87
CLNS1A-209ENST00000527299 EXO1Q9UQ84 846 aaKnown RBP3.34□□□□□ -1.87
CLNS1A-209ENST00000527299 SLC22A13Q9Y226 551 aa3.34□□□□□ -1.87
CLNS1A-209ENST00000527299 BTRCQ9Y297 605 aa3.34□□□□□ -1.87
CLNS1A-209ENST00000527299 PRG3Q9Y2Y8 225 aaPredicted RBP3.34□□□□□ -1.87
CLNS1A-209ENST00000527299 TBL2Q9Y4P3 447 aaKnown RBP3.34□□□□□ -1.87
CLNS1A-209ENST00000527299 FLVCR1Q9Y5Y0 555 aa3.34□□□□□ -1.87
CLNS1A-209ENST00000527299 EVPLQ92817 2033 aa3.34□□□□□ -1.88
CLNS1A-209ENST00000527299 COL1A1P02452 1464 aaPredicted RBP3.34□□□□□ -1.88
CLNS1A-209ENST00000527299 COL24A1Q17RW2 1714 aa3.33□□□□□ -1.88
CLNS1A-209ENST00000527299 LOC105371242A0A075B767 164 aa3.33□□□□□ -1.88
CLNS1A-209ENST00000527299 A0A0D9SG52 128 aa3.33□□□□□ -1.88
CLNS1A-209ENST00000527299 A0A1W2PNV4 684 aa3.33□□□□□ -1.88
CLNS1A-209ENST00000527299 HYKKA2RU49 373 aa3.33□□□□□ -1.88
CLNS1A-209ENST00000527299 CLEC18AA5D8T8 446 aa3.33□□□□□ -1.88
CLNS1A-209ENST00000527299 MGAT4DA6NG13 374 aa3.33□□□□□ -1.88
CLNS1A-209ENST00000527299 GJE1A6NN92 205 aa3.33□□□□□ -1.88
CLNS1A-209ENST00000527299 A6NNC1 897 aa3.33□□□□□ -1.88
CLNS1A-209ENST00000527299 A8MVM7 634 aa3.33□□□□□ -1.88
CLNS1A-209ENST00000527299 FAM86B1E9PN63 330 aa3.33□□□□□ -1.88
CLNS1A-209ENST00000527299 F6UZH7 168 aa3.33□□□□□ -1.88
CLNS1A-209ENST00000527299 K7ERU9 68 aa3.33□□□□□ -1.88
CLNS1A-209ENST00000527299 ACKR2O00590 384 aa3.33□□□□□ -1.88
CLNS1A-209ENST00000527299 OR7A17O14581 309 aa3.33□□□□□ -1.88
CLNS1A-209ENST00000527299 PIP5K1BO14986 540 aa3.33□□□□□ -1.88
CLNS1A-209ENST00000527299 CCL25O15444 150 aa3.33□□□□□ -1.88
CLNS1A-209ENST00000527299 SSNA1O43805 119 aa3.33□□□□□ -1.88
CLNS1A-209ENST00000527299 SLC19A2O60779 497 aa3.33□□□□□ -1.88
CLNS1A-209ENST00000527299 WDR1O75083 606 aa3.33□□□□□ -1.88
CLNS1A-209ENST00000527299 ECI2O75521 394 aa3.33□□□□□ -1.88
CLNS1A-209ENST00000527299 ERAL1O75616 437 aaKnown RBP3.33□□□□□ -1.88
CLNS1A-209ENST00000527299 DFFBO76075 338 aa3.33□□□□□ -1.88
CLNS1A-209ENST00000527299 TNFSF15O95150 251 aa3.33□□□□□ -1.88
CLNS1A-209ENST00000527299 NDUFB10O96000 172 aa3.33□□□□□ -1.88
CLNS1A-209ENST00000527299 PDGFBP01127 241 aaPredicted RBP3.33□□□□□ -1.88
CLNS1A-209ENST00000527299 TFP02787 698 aa3.33□□□□□ -1.88
CLNS1A-209ENST00000527299 VTNP04004 478 aa3.33□□□□□ -1.88
CLNS1A-209ENST00000527299 FAM86B2P0C5J1 330 aa3.33□□□□□ -1.88
CLNS1A-209ENST00000527299 CSH1P0DML2 217 aa3.33□□□□□ -1.88
CLNS1A-209ENST00000527299 CSH2P0DML3 217 aa3.33□□□□□ -1.88
CLNS1A-209ENST00000527299 GZMBP10144 247 aa3.33□□□□□ -1.88
CLNS1A-209ENST00000527299 HOXB2P14652 356 aa3.33□□□□□ -1.88
CLNS1A-209ENST00000527299 ETS1P14921 441 aa3.33□□□□□ -1.88
CLNS1A-209ENST00000527299 FOLR1P15328 257 aa3.33□□□□□ -1.88
CLNS1A-209ENST00000527299 CPT2P23786 658 aa3.33□□□□□ -1.88
CLNS1A-209ENST00000527299 NFYBP25208 207 aa3.33□□□□□ -1.88
CLNS1A-209ENST00000527299 DCTP40126 519 aa3.33□□□□□ -1.88
CLNS1A-209ENST00000527299 THPOP40225 353 aa3.33□□□□□ -1.88
CLNS1A-209ENST00000527299 PXNP49023 591 aaPredicted RBP3.33□□□□□ -1.88
CLNS1A-209ENST00000527299 MRPL19P49406 292 aaKnown RBP3.33□□□□□ -1.88
CLNS1A-209ENST00000527299 TNFSF10P50591 281 aa3.33□□□□□ -1.88
CLNS1A-209ENST00000527299 ZNF140P52738 457 aaPredicted RBP3.33□□□□□ -1.88
CLNS1A-209ENST00000527299 CDKN2DP55273 166 aa3.33□□□□□ -1.88
CLNS1A-209ENST00000527299 NDUFA6P56556 154 aa3.33□□□□□ -1.88
CLNS1A-209ENST00000527299 WNT3P56703 355 aa3.33□□□□□ -1.88
CLNS1A-209ENST00000527299 OR10A3P58181 314 aa3.33□□□□□ -1.88
CLNS1A-209ENST00000527299 OR5I1Q13606 314 aa3.33□□□□□ -1.88
CLNS1A-209ENST00000527299 HTR4Q13639 388 aa3.33□□□□□ -1.88
CLNS1A-209ENST00000527299 CBFBQ13951 182 aa3.33□□□□□ -1.88
CLNS1A-209ENST00000527299 GRM4Q14833 912 aa3.33□□□□□ -1.88
CLNS1A-209ENST00000527299 OR4D1Q15615 310 aa3.33□□□□□ -1.88
CLNS1A-209ENST00000527299 NTRK2Q16620 822 aa3.33□□□□□ -1.88
CLNS1A-209ENST00000527299 ST3GAL2Q16842 350 aa3.33□□□□□ -1.88
CLNS1A-209ENST00000527299 UNC50Q53HI1 259 aa3.33□□□□□ -1.88
CLNS1A-209ENST00000527299 RAB6CQ53S08 254 aa3.33□□□□□ -1.88
CLNS1A-209ENST00000527299 C1orf194Q5T5A4 169 aa3.33□□□□□ -1.88
CLNS1A-209ENST00000527299 IDNKQ5T6J7 187 aa3.33□□□□□ -1.88
CLNS1A-209ENST00000527299 LIPMQ5VYY2 423 aa3.33□□□□□ -1.88
CLNS1A-209ENST00000527299 ZNF57Q68EA5 555 aaPredicted RBP3.33□□□□□ -1.88
CLNS1A-209ENST00000527299 NADSYN1Q6IA69 706 aa3.33□□□□□ -1.88
CLNS1A-209ENST00000527299 OR2A2Q6IF42 318 aa3.33□□□□□ -1.88
CLNS1A-209ENST00000527299 FAM71E1Q6IPT2 247 aa3.33□□□□□ -1.88
CLNS1A-209ENST00000527299 ADNP2Q6IQ32 1131 aa3.33□□□□□ -1.88
CLNS1A-209ENST00000527299 CNIH2Q6PI25 160 aa3.33□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms