RNA–Protein interactions for RNA: ENST00000526430.1

NEDD8-204, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 3

Gene NEDD8, Length 286 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-204ENST00000526430 ALG10Q5BKT4 473 aa9.5□□□□□ -0.89
NEDD8-204ENST00000526430 KDM4DQ6B0I6 523 aa9.5□□□□□ -0.89
NEDD8-204ENST00000526430 ZNF620Q6ZNG0 422 aa9.5□□□□□ -0.89
NEDD8-204ENST00000526430 BEND4Q6ZU67 534 aa9.5□□□□□ -0.89
NEDD8-204ENST00000526430 HIST3H2AQ7L7L0 130 aa9.5□□□□□ -0.89
NEDD8-204ENST00000526430 UEVLDQ8IX04 471 aa9.5□□□□□ -0.89
NEDD8-204ENST00000526430 C20orf196Q8IYI0 205 aa9.5□□□□□ -0.89
NEDD8-204ENST00000526430 CDK20Q8IZL9 346 aa9.5□□□□□ -0.89
NEDD8-204ENST00000526430 PQLC1Q8N2U9 271 aa9.5□□□□□ -0.89
NEDD8-204ENST00000526430 ZNF525Q8N782 197 aa9.5□□□□□ -0.89
NEDD8-204ENST00000526430 CLDN22Q8N7P3 220 aa9.5□□□□□ -0.89
NEDD8-204ENST00000526430 KBTBD8Q8NFY9 601 aa9.5□□□□□ -0.89
NEDD8-204ENST00000526430 OR6X1Q8NH79 312 aa9.5□□□□□ -0.89
NEDD8-204ENST00000526430 ZNF519Q8TB69 540 aa9.5□□□□□ -0.89
NEDD8-204ENST00000526430 HIST1H2ACQ93077 130 aa9.5□□□□□ -0.89
NEDD8-204ENST00000526430 TMEM54Q969K7 222 aa9.5□□□□□ -0.89
NEDD8-204ENST00000526430 SAMD8Q96LT4 415 aa9.5□□□□□ -0.89
NEDD8-204ENST00000526430 TSPAN32Q96QS1 320 aa9.5□□□□□ -0.89
NEDD8-204ENST00000526430 SLC29A1Q99808 456 aa9.5□□□□□ -0.89
NEDD8-204ENST00000526430 OSBPL10Q9BXB5 764 aa9.5□□□□□ -0.89
NEDD8-204ENST00000526430 GABARAPL1Q9H0R8 117 aa9.5□□□□□ -0.89
NEDD8-204ENST00000526430 TXNIPQ9H3M7 391 aa9.5□□□□□ -0.89
NEDD8-204ENST00000526430 NKX1-2Q9UD57 310 aaPredicted RBP9.5□□□□□ -0.89
NEDD8-204ENST00000526430 RCE1Q9Y256 329 aa9.5□□□□□ -0.89
NEDD8-204ENST00000526430 EMC9Q9Y3B6 208 aa9.5□□□□□ -0.89
NEDD8-204ENST00000526430 IGKV1D-43A0A0B4J1Z2 117 aa9.49□□□□□ -0.89
NEDD8-204ENST00000526430 RPL36A-HNRNPH2H7BZ11 118 aa9.49□□□□□ -0.89
NEDD8-204ENST00000526430 DLGAP1O14490 977 aa9.49□□□□□ -0.89
NEDD8-204ENST00000526430 BHLHE40O14503 412 aa9.49□□□□□ -0.89
NEDD8-204ENST00000526430 ARPC3O15145 178 aa9.49□□□□□ -0.89
NEDD8-204ENST00000526430 TMPRSS2O15393 492 aa9.49□□□□□ -0.89
NEDD8-204ENST00000526430 TRMUO75648 421 aaKnown RBP9.49□□□□□ -0.89
NEDD8-204ENST00000526430 NDUFB2O95178 105 aa9.49□□□□□ -0.89
NEDD8-204ENST00000526430 VENTXO95231 258 aa9.49□□□□□ -0.89
NEDD8-204ENST00000526430 ADAP00813 363 aa9.49□□□□□ -0.89
NEDD8-204ENST00000526430 CD14P08571 375 aa9.49□□□□□ -0.89
NEDD8-204ENST00000526430 ITGA5P08648 1049 aa9.49□□□□□ -0.89
NEDD8-204ENST00000526430 PGA4P0DJD7 388 aa9.49□□□□□ -0.89
NEDD8-204ENST00000526430 PGA3P0DJD8 388 aa9.49□□□□□ -0.89
NEDD8-204ENST00000526430 FCGR1AP12314 374 aa9.49□□□□□ -0.89
NEDD8-204ENST00000526430 COX5AP20674 150 aa9.49□□□□□ -0.89
NEDD8-204ENST00000526430 GTF2E2P29084 291 aaKnown RBP9.49□□□□□ -0.89
NEDD8-204ENST00000526430 POLR2IP36954 125 aaKnown RBP9.49□□□□□ -0.89
NEDD8-204ENST00000526430 BIDP55957 195 aa9.49□□□□□ -0.89
NEDD8-204ENST00000526430 PRPS1P60891 318 aa9.49□□□□□ -0.89
NEDD8-204ENST00000526430 CAMK2DQ13557 499 aa9.49□□□□□ -0.89
NEDD8-204ENST00000526430 C1DQ13901 141 aaKnown RBP9.49□□□□□ -0.89
NEDD8-204ENST00000526430 TSC22D1Q15714 1073 aa9.49□□□□□ -0.89
NEDD8-204ENST00000526430 MIDNQ504T8 468 aa9.49□□□□□ -0.89
NEDD8-204ENST00000526430 AGAP6Q5VW22 663 aa9.49□□□□□ -0.89
NEDD8-204ENST00000526430 FBXW9Q5XUX1 488 aa9.49□□□□□ -0.89
NEDD8-204ENST00000526430 C11orf71Q6IPW1 123 aa9.49□□□□□ -0.89
NEDD8-204ENST00000526430 NIPAL3Q6P499 406 aa9.49□□□□□ -0.89
NEDD8-204ENST00000526430 SMARCD3Q6STE5 483 aa9.49□□□□□ -0.89
NEDD8-204ENST00000526430 SEZ6L2Q6UXD5 910 aa9.49□□□□□ -0.89
NEDD8-204ENST00000526430 ANKK1Q8NFD2 765 aa9.49□□□□□ -0.89
NEDD8-204ENST00000526430 STEAP2Q8NFT2 490 aa9.49□□□□□ -0.89
NEDD8-204ENST00000526430 OR4Q3Q8NH05 313 aa9.49□□□□□ -0.89
NEDD8-204ENST00000526430 BOD1Q96IK1 185 aa9.49□□□□□ -0.89
NEDD8-204ENST00000526430 LRR1Q96L50 414 aa9.49□□□□□ -0.89
NEDD8-204ENST00000526430 Q96M85 177 aa9.49□□□□□ -0.89
NEDD8-204ENST00000526430 KATNB1Q9BVA0 655 aa9.49□□□□□ -0.89
NEDD8-204ENST00000526430 CACNG6Q9BXT2 260 aa9.49□□□□□ -0.89
NEDD8-204ENST00000526430 LINC00470Q9BZP3 86 aa9.49□□□□□ -0.89
NEDD8-204ENST00000526430 NELFAQ9H3P2 528 aa9.49□□□□□ -0.89
NEDD8-204ENST00000526430 PARPBPQ9NWS1 579 aa9.49□□□□□ -0.89
NEDD8-204ENST00000526430 CISD1Q9NZ45 108 aaKnown RBP9.49□□□□□ -0.89
NEDD8-204ENST00000526430 EMC3Q9P0I2 261 aa9.49□□□□□ -0.89
NEDD8-204ENST00000526430 MALT1Q9UDY8 824 aa9.49□□□□□ -0.89
NEDD8-204ENST00000526430 OAZ3Q9UMX2 235 aa9.49□□□□□ -0.89
NEDD8-204ENST00000526430 IER3IP1Q9Y5U9 82 aa9.49□□□□□ -0.89
NEDD8-204ENST00000526430 SAC3D1A6NKF1 404 aa9.48□□□□□ -0.89
NEDD8-204ENST00000526430 VWC2LB2RUY7 222 aa9.48□□□□□ -0.89
NEDD8-204ENST00000526430 G3V2T6 193 aa9.48□□□□□ -0.89
NEDD8-204ENST00000526430 SOCS2O14508 198 aa9.48□□□□□ -0.89
NEDD8-204ENST00000526430 E2F6O75461 281 aa9.48□□□□□ -0.89
NEDD8-204ENST00000526430 SERPINI2O75830 405 aa9.48□□□□□ -0.89
NEDD8-204ENST00000526430 OR6A2O95222 327 aa9.48□□□□□ -0.89
NEDD8-204ENST00000526430 SOX14O95416 240 aa9.48□□□□□ -0.89
NEDD8-204ENST00000526430 BCL10O95999 233 aa9.48□□□□□ -0.89
NEDD8-204ENST00000526430 ANXA8P13928 327 aa9.48□□□□□ -0.89
NEDD8-204ENST00000526430 ANPEPP15144 967 aa9.48□□□□□ -0.89
NEDD8-204ENST00000526430 ACADSP16219 412 aa9.48□□□□□ -0.89
NEDD8-204ENST00000526430 IFNGR2P38484 337 aa9.48□□□□□ -0.89
NEDD8-204ENST00000526430 CDKN2AP42771 156 aaKnown RBP9.48□□□□□ -0.89
NEDD8-204ENST00000526430 RPL27P61353 136 aaKnown RBP9.48□□□□□ -0.89
NEDD8-204ENST00000526430 EFNB1P98172 346 aa9.48□□□□□ -0.89
NEDD8-204ENST00000526430 CDK5Q00535 292 aa9.48□□□□□ -0.89
NEDD8-204ENST00000526430 BSPH1Q075Z2 132 aa9.48□□□□□ -0.89
NEDD8-204ENST00000526430 COX10Q12887 443 aa9.48□□□□□ -0.89
NEDD8-204ENST00000526430 MESTQ5EB52 335 aa9.48□□□□□ -0.89
NEDD8-204ENST00000526430 SFRP5Q5T4F7 317 aa9.48□□□□□ -0.89
NEDD8-204ENST00000526430 ACSM5Q6NUN0 579 aa9.48□□□□□ -0.89
NEDD8-204ENST00000526430 DPY19L2P2Q6ZN68 376 aa9.48□□□□□ -0.89
NEDD8-204ENST00000526430 Q6ZT83 130 aa9.48□□□□□ -0.89
NEDD8-204ENST00000526430 PTCHD4Q6ZW05 846 aa9.48□□□□□ -0.89
NEDD8-204ENST00000526430 STK32CQ86UX6 486 aa9.48□□□□□ -0.89
NEDD8-204ENST00000526430 ZNF100Q8IYN0 542 aa9.48□□□□□ -0.89
NEDD8-204ENST00000526430 ZNF433Q8N7K0 673 aaPredicted RBP9.48□□□□□ -0.89
NEDD8-204ENST00000526430 FAM216AQ8WUB2 273 aa9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms