RNA–Protein interactions for RNA: ENST00000525257.1

USP47-205, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 4

Gene USP47, Length 548 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-205ENST00000525257 PABPC1L2AQ5JQF8 200 aa20.34■□□□□ 0.85
USP47-205ENST00000525257 DLEU7Q6UYE1 221 aa20.34■□□□□ 0.85
USP47-205ENST00000525257 CPEB3Q8NE35 698 aaKnown RBP20.34■□□□□ 0.85
USP47-205ENST00000525257 OPN4Q9UHM6 478 aa20.34■□□□□ 0.85
USP47-205ENST00000525257 ISPDA4D126 451 aa20.33■□□□□ 0.85
USP47-205ENST00000525257 TGDSO95455 350 aa20.33■□□□□ 0.85
USP47-205ENST00000525257 IGHV1-46P01743 117 aa20.33■□□□□ 0.85
USP47-205ENST00000525257 F13BP05160 661 aa20.33■□□□□ 0.85
USP47-205ENST00000525257 MPV17P39210 176 aa20.33■□□□□ 0.85
USP47-205ENST00000525257 UBA52P62987 128 aaKnown RBP20.33■□□□□ 0.85
USP47-205ENST00000525257 RUNDC3AQ59EK9 446 aa20.33■□□□□ 0.85
USP47-205ENST00000525257 IPCEF1Q8WWN9 437 aaPredicted RBP20.33■□□□□ 0.85
USP47-205ENST00000525257 TLCD1Q96CP7 247 aa20.33■□□□□ 0.85
USP47-205ENST00000525257 C7orf26Q96N11 449 aa20.33■□□□□ 0.85
USP47-205ENST00000525257 CCDC28BQ9BUN5 200 aa20.33■□□□□ 0.85
USP47-205ENST00000525257 UBAP1Q9NZ09 502 aa20.33■□□□□ 0.85
USP47-205ENST00000525257 PPIAL4AQ9Y536 164 aa20.33■□□□□ 0.85
USP47-205ENST00000525257 PCDHGB1Q9Y5G3 927 aa20.33■□□□□ 0.85
USP47-205ENST00000525257 A0A1W2PRG6 482 aa20.32■□□□□ 0.84
USP47-205ENST00000525257 GATA3P23771 443 aa20.32■□□□□ 0.84
USP47-205ENST00000525257 STOMP27105 288 aa20.32■□□□□ 0.84
USP47-205ENST00000525257 GCH1P30793 250 aa20.32■□□□□ 0.84
USP47-205ENST00000525257 MTPNP58546 118 aa20.32■□□□□ 0.84
USP47-205ENST00000525257 SELPLGQ14242 412 aa20.32■□□□□ 0.84
USP47-205ENST00000525257 TMEM255AQ5JRV8 349 aa20.32■□□□□ 0.84
USP47-205ENST00000525257 FAM209AQ5JX71 171 aa20.32■□□□□ 0.84
USP47-205ENST00000525257 THEM4Q5T1C6 240 aa20.32■□□□□ 0.84
USP47-205ENST00000525257 RETREG3Q86VR2 466 aa20.32■□□□□ 0.84
USP47-205ENST00000525257 ZNF101Q8IZC7 436 aa20.32■□□□□ 0.84
USP47-205ENST00000525257 ASB10Q8WXI3 467 aa20.32■□□□□ 0.84
USP47-205ENST00000525257 MPP4Q96JB8 637 aa20.32■□□□□ 0.84
USP47-205ENST00000525257 ZNF426Q9BUY5 554 aa20.32■□□□□ 0.84
USP47-205ENST00000525257 MRPL13Q9BYD1 178 aaKnown RBP20.32■□□□□ 0.84
USP47-205ENST00000525257 SLC19A3Q9BZV2 496 aa20.32■□□□□ 0.84
USP47-205ENST00000525257 CCNB1IP1Q9NPC3 277 aa20.32■□□□□ 0.84
USP47-205ENST00000525257 MEPEQ9NQ76 525 aaPredicted RBP20.32■□□□□ 0.84
USP47-205ENST00000525257 DDX28Q9NUL7 540 aaKnown RBP20.32■□□□□ 0.84
USP47-205ENST00000525257 TRRAPQ9Y4A5 3859 aa20.32■□□□□ 0.84
USP47-205ENST00000525257 TRMUO75648 421 aaKnown RBP20.31■□□□□ 0.84
USP47-205ENST00000525257 SLC2A10O95528 541 aa20.31■□□□□ 0.84
USP47-205ENST00000525257 FSHBP01225 129 aa20.31■□□□□ 0.84
USP47-205ENST00000525257 CD247P20963 164 aa20.31■□□□□ 0.84
USP47-205ENST00000525257 FPR2P25090 351 aa20.31■□□□□ 0.84
USP47-205ENST00000525257 CDAP32320 146 aa20.31■□□□□ 0.84
USP47-205ENST00000525257 WNT5AP41221 380 aa20.31■□□□□ 0.84
USP47-205ENST00000525257 MMP15P51511 669 aa20.31■□□□□ 0.84
USP47-205ENST00000525257 RPL18Q07020 188 aaKnown RBP20.31■□□□□ 0.84
USP47-205ENST00000525257 ZNF718Q3SXZ3 478 aa20.31■□□□□ 0.84
USP47-205ENST00000525257 DHDDSQ86SQ9 333 aa20.31■□□□□ 0.84
USP47-205ENST00000525257 SEPHS2Q99611 448 aa20.31■□□□□ 0.84
USP47-205ENST00000525257 KCNN2Q9H2S1 579 aa20.31■□□□□ 0.84
USP47-205ENST00000525257 TANC2Q9HCD6 1990 aa20.3■□□□□ 0.84
USP47-205ENST00000525257 PLSCR5A0PG75 271 aa20.3■□□□□ 0.84
USP47-205ENST00000525257 C5orf49A4QMS7 147 aa20.3■□□□□ 0.84
USP47-205ENST00000525257 ZSCAN5BA6NJL1 495 aa20.3■□□□□ 0.84
USP47-205ENST00000525257 ERLIN1O75477 346 aa20.3■□□□□ 0.84
USP47-205ENST00000525257 ACADSP16219 412 aa20.3■□□□□ 0.84
USP47-205ENST00000525257 ZNF32P17041 273 aa20.3■□□□□ 0.84
USP47-205ENST00000525257 UGT2B15P54855 530 aa20.3■□□□□ 0.84
USP47-205ENST00000525257 HNRNPA0Q13151 305 aaKnown RBP20.3■□□□□ 0.84
USP47-205ENST00000525257 C10orf128Q5T292 105 aa20.3■□□□□ 0.84
USP47-205ENST00000525257 SLC25A40Q8TBP6 338 aa20.3■□□□□ 0.84
USP47-205ENST00000525257 MARS2Q96GW9 593 aaKnown RBP20.3■□□□□ 0.84
USP47-205ENST00000525257 PRSS27Q9BQR3 290 aa20.3■□□□□ 0.84
USP47-205ENST00000525257 SIAEQ9HAT2 523 aa20.3■□□□□ 0.84
USP47-205ENST00000525257 TMBIM4Q9HC24 238 aa20.3■□□□□ 0.84
USP47-205ENST00000525257 EIF3KQ9UBQ5 218 aaKnown RBP20.3■□□□□ 0.84
USP47-205ENST00000525257 UBOX5O94941 541 aa20.29■□□□□ 0.84
USP47-205ENST00000525257 ATP4BP51164 291 aa20.29■□□□□ 0.84
USP47-205ENST00000525257 TREML1Q86YW5 311 aa20.29■□□□□ 0.84
USP47-205ENST00000525257 AKR7LQ8NHP1 331 aa20.29■□□□□ 0.84
USP47-205ENST00000525257 PFN4Q8NHR9 129 aa20.29■□□□□ 0.84
USP47-205ENST00000525257 ST7LQ8TDW4 575 aa20.29■□□□□ 0.84
USP47-205ENST00000525257 DVL3Q92997 716 aaPredicted RBP20.29■□□□□ 0.84
USP47-205ENST00000525257 TAMM41Q96BW9 452 aa20.29■□□□□ 0.84
USP47-205ENST00000525257 POM121L2Q96KW2 1035 aa20.29■□□□□ 0.84
USP47-205ENST00000525257 OR2J1Q9GZK6 312 aa20.29■□□□□ 0.84
USP47-205ENST00000525257 PCDHAC1Q9H158 963 aa20.29■□□□□ 0.84
USP47-205ENST00000525257 NTN4Q9HB63 628 aa20.29■□□□□ 0.84
USP47-205ENST00000525257 INIPQ9NRY2 104 aa20.29■□□□□ 0.84
USP47-205ENST00000525257 LEF1Q9UJU2 399 aaPredicted RBP20.29■□□□□ 0.84
USP47-205ENST00000525257 UGT2A1Q9Y4X1 527 aa20.29■□□□□ 0.84
USP47-205ENST00000525257 LOC100509620A0A075B734 347 aa20.28■□□□□ 0.84
USP47-205ENST00000525257 CENPBD1B2RD01 187 aa20.28■□□□□ 0.84
USP47-205ENST00000525257 TMPRSS2O15393 492 aa20.28■□□□□ 0.84
USP47-205ENST00000525257 MGRN1O60291 552 aa20.28■□□□□ 0.84
USP47-205ENST00000525257 AQP2P41181 271 aa20.28■□□□□ 0.84
USP47-205ENST00000525257 GDI2P50395 445 aaKnown RBP20.28■□□□□ 0.84
USP47-205ENST00000525257 DAP3P51398 398 aaKnown RBP20.28■□□□□ 0.84
USP47-205ENST00000525257 ZNF133P52736 654 aaPredicted RBP20.28■□□□□ 0.84
USP47-205ENST00000525257 MRPS34P82930 218 aaKnown RBP20.28■□□□□ 0.84
USP47-205ENST00000525257 FMODQ06828 376 aa20.28■□□□□ 0.84
USP47-205ENST00000525257 SLC3A1Q07837 685 aa20.28■□□□□ 0.84
USP47-205ENST00000525257 SGCAQ16586 387 aa20.28■□□□□ 0.84
USP47-205ENST00000525257 SPRNQ5BIV9 151 aa20.28■□□□□ 0.84
USP47-205ENST00000525257 RFPL4BQ6ZWI9 263 aa20.28■□□□□ 0.84
USP47-205ENST00000525257 HDDC2Q7Z4H3 204 aa20.28■□□□□ 0.84
USP47-205ENST00000525257 PATL1Q86TB9 770 aaKnown RBP20.28■□□□□ 0.84
USP47-205ENST00000525257 SIGLECL1Q8N7X8 197 aa20.28■□□□□ 0.84
USP47-205ENST00000525257 KLF14Q8TD94 323 aaPredicted RBP20.28■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms