RNA–Protein interactions for RNA: ENST00000525209.5

CD44-213, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 4

Gene CD44, Length 574 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-213ENST00000525209 CCDC54Q8NEL0 328 aa3.85□□□□□ -1.79
CD44-213ENST00000525209 OR1J1Q8NGS3 322 aa3.85□□□□□ -1.79
CD44-213ENST00000525209 OR51F2Q8NH61 342 aa3.85□□□□□ -1.79
CD44-213ENST00000525209 IL17DQ8TAD2 202 aa3.85□□□□□ -1.79
CD44-213ENST00000525209 PIGXQ8TBF5 258 aa3.85□□□□□ -1.79
CD44-213ENST00000525209 FBXO25Q8TCJ0 367 aa3.85□□□□□ -1.79
CD44-213ENST00000525209 NELFBQ8WX92 580 aa3.85□□□□□ -1.79
CD44-213ENST00000525209 TOMM40LQ969M1 308 aa3.85□□□□□ -1.79
CD44-213ENST00000525209 NTNG2Q96CW9 530 aa3.85□□□□□ -1.79
CD44-213ENST00000525209 FBXO17Q96EF6 278 aa3.85□□□□□ -1.79
CD44-213ENST00000525209 MYEOVQ96EZ4 313 aa3.85□□□□□ -1.79
CD44-213ENST00000525209 CEP170P1Q96L14 293 aa3.85□□□□□ -1.79
CD44-213ENST00000525209 EPYCQ99645 322 aa3.85□□□□□ -1.79
CD44-213ENST00000525209 NIPSNAP1Q9BPW8 284 aa3.85□□□□□ -1.79
CD44-213ENST00000525209 SLC35A5Q9BS91 424 aa3.85□□□□□ -1.79
CD44-213ENST00000525209 MRPS26Q9BYN8 205 aaKnown RBP3.85□□□□□ -1.79
CD44-213ENST00000525209 SHARPINQ9H0F6 387 aa3.85□□□□□ -1.79
CD44-213ENST00000525209 ZCCHC4Q9H5U6 513 aa3.85□□□□□ -1.79
CD44-213ENST00000525209 FNDC4Q9H6D8 234 aaPredicted RBP3.85□□□□□ -1.79
CD44-213ENST00000525209 INIPQ9NRY2 104 aa3.85□□□□□ -1.79
CD44-213ENST00000525209 AGPAT4Q9NRZ5 378 aa3.85□□□□□ -1.79
CD44-213ENST00000525209 GID8Q9NWU2 228 aa3.85□□□□□ -1.79
CD44-213ENST00000525209 CLN6Q9NWW5 311 aa3.85□□□□□ -1.79
CD44-213ENST00000525209 CCDC59Q9P031 241 aaKnown RBP3.85□□□□□ -1.79
CD44-213ENST00000525209 AGO1Q9UL18 857 aaKnown RBP3.85□□□□□ -1.79
CD44-213ENST00000525209 GINS2Q9Y248 185 aa3.85□□□□□ -1.79
CD44-213ENST00000525209 IRAK3Q9Y616 596 aa3.85□□□□□ -1.79
CD44-213ENST00000525209 MTCH2Q9Y6C9 303 aa3.85□□□□□ -1.79
CD44-213ENST00000525209 HFM1A2PYH4 1435 aa3.85□□□□□ -1.79
CD44-213ENST00000525209 ADGRL2O95490 1459 aa3.85□□□□□ -1.79
CD44-213ENST00000525209 MYOM1P52179 1685 aa3.84□□□□□ -1.79
CD44-213ENST00000525209 NUP188Q5SRE5 1749 aa3.84□□□□□ -1.79
CD44-213ENST00000525209 TNS1Q9HBL0 1735 aaKnown RBP3.84□□□□□ -1.79
CD44-213ENST00000525209 COL14A1Q05707 1796 aaKnown RBP3.84□□□□□ -1.79
CD44-213ENST00000525209 FRMPD3Q5JV73 1810 aa3.84□□□□□ -1.79
CD44-213ENST00000525209 A0A1B0GTL3 188 aa3.84□□□□□ -1.79
CD44-213ENST00000525209 ASPDHA6ND91 283 aa3.84□□□□□ -1.79
CD44-213ENST00000525209 OR2AT4A6NND4 320 aa3.84□□□□□ -1.79
CD44-213ENST00000525209 J3QLI3 93 aa3.84□□□□□ -1.79
CD44-213ENST00000525209 CXCL13O43927 109 aa3.84□□□□□ -1.79
CD44-213ENST00000525209 WDR1O75083 606 aa3.84□□□□□ -1.79
CD44-213ENST00000525209 ALOX12BO75342 701 aa3.84□□□□□ -1.79
CD44-213ENST00000525209 OAS1P00973 400 aaKnown RBP3.84□□□□□ -1.79
CD44-213ENST00000525209 APOEP02649 317 aa3.84□□□□□ -1.79
CD44-213ENST00000525209 SERPINA5P05154 406 aa3.84□□□□□ -1.79
CD44-213ENST00000525209 C8orf88P0DMB2 117 aa3.84□□□□□ -1.79
CD44-213ENST00000525209 CD36P16671 472 aa3.84□□□□□ -1.79
CD44-213ENST00000525209 S100A1P23297 94 aa3.84□□□□□ -1.79
CD44-213ENST00000525209 EDNRAP25101 427 aa3.84□□□□□ -1.79
CD44-213ENST00000525209 C21orf33P30042 268 aaPredicted RBP3.84□□□□□ -1.79
CD44-213ENST00000525209 RFC3P40938 356 aa3.84□□□□□ -1.79
CD44-213ENST00000525209 YAP1P46937 504 aaKnown RBP3.84□□□□□ -1.79
CD44-213ENST00000525209 HCAR3P49019 387 aa3.84□□□□□ -1.79
CD44-213ENST00000525209 SERPINB8P50452 374 aa3.84□□□□□ -1.79
CD44-213ENST00000525209 CDK9P50750 372 aaKnown RBP3.84□□□□□ -1.79
CD44-213ENST00000525209 CAV2P51636 162 aa3.84□□□□□ -1.79
CD44-213ENST00000525209 LBX1P52954 281 aa3.84□□□□□ -1.79
CD44-213ENST00000525209 PSME3P61289 254 aa3.84□□□□□ -1.79
CD44-213ENST00000525209 ASAH1Q13510 395 aa3.84□□□□□ -1.79
CD44-213ENST00000525209 FLOT2Q14254 428 aa3.84□□□□□ -1.79
CD44-213ENST00000525209 ZNF234Q14588 700 aa3.84□□□□□ -1.79
CD44-213ENST00000525209 ARL6IP1Q15041 203 aa3.84□□□□□ -1.79
CD44-213ENST00000525209 SLC9A3R2Q15599 337 aa3.84□□□□□ -1.79
CD44-213ENST00000525209 TMEM176BQ3YBM2 270 aaPredicted RBP3.84□□□□□ -1.79
CD44-213ENST00000525209 SPIN3Q5JUX0 258 aa3.84□□□□□ -1.79
CD44-213ENST00000525209 MEDAGQ5VYS4 303 aa3.84□□□□□ -1.79
CD44-213ENST00000525209 TRNP1Q6NT89 227 aa3.84□□□□□ -1.79
CD44-213ENST00000525209 LCLAT1Q6UWP7 414 aa3.84□□□□□ -1.79
CD44-213ENST00000525209 ZNF730Q6ZMV8 503 aa3.84□□□□□ -1.79
CD44-213ENST00000525209 Q6ZSR9 355 aa3.84□□□□□ -1.79
CD44-213ENST00000525209 PIWIL4Q7Z3Z4 852 aaKnown RBP3.84□□□□□ -1.79
CD44-213ENST00000525209 LYG2Q86SG7 212 aa3.84□□□□□ -1.79
CD44-213ENST00000525209 PIGZQ86VD9 579 aa3.84□□□□□ -1.79
CD44-213ENST00000525209 MYPOPQ86VE0 399 aaPredicted RBP3.84□□□□□ -1.79
CD44-213ENST00000525209 PLA2G4DQ86XP0 818 aa3.84□□□□□ -1.79
CD44-213ENST00000525209 SREK1IP1Q8N9Q2 155 aaPredicted RBP3.84□□□□□ -1.79
CD44-213ENST00000525209 OR9A4Q8NGU2 314 aa3.84□□□□□ -1.79
CD44-213ENST00000525209 ZPLD1Q8TCW7 415 aa3.84□□□□□ -1.79
CD44-213ENST00000525209 ACTRT1Q8TDG2 376 aa3.84□□□□□ -1.79
CD44-213ENST00000525209 HPSE2Q8WWQ2 592 aa3.84□□□□□ -1.79
CD44-213ENST00000525209 IFT81Q8WYA0 676 aa3.84□□□□□ -1.79
CD44-213ENST00000525209 RTP4Q96DX8 246 aa3.84□□□□□ -1.79
CD44-213ENST00000525209 RITA1Q96K30 269 aa3.84□□□□□ -1.79
CD44-213ENST00000525209 LPAR4Q99677 370 aa3.84□□□□□ -1.79
CD44-213ENST00000525209 CABLES2Q9BTV7 478 aa3.84□□□□□ -1.79
CD44-213ENST00000525209 PELI2Q9HAT8 420 aa3.84□□□□□ -1.79
CD44-213ENST00000525209 PARVBQ9HBI1 364 aa3.84□□□□□ -1.79
CD44-213ENST00000525209 XPNPEP1Q9NQW7 623 aa3.84□□□□□ -1.79
CD44-213ENST00000525209 MCUBQ9NWR8 336 aa3.84□□□□□ -1.79
CD44-213ENST00000525209 HRASLS2Q9NWW9 162 aa3.84□□□□□ -1.79
CD44-213ENST00000525209 SDHAF2Q9NX18 166 aa3.84□□□□□ -1.79
CD44-213ENST00000525209 SLC25A37Q9NYZ2 338 aa3.84□□□□□ -1.79
CD44-213ENST00000525209 ELF5Q9UKW6 265 aaPredicted RBP3.84□□□□□ -1.79
CD44-213ENST00000525209 KCNIP3Q9Y2W7 256 aa3.84□□□□□ -1.79
CD44-213ENST00000525209 ZNF521Q96K83 1311 aa3.84□□□□□ -1.79
CD44-213ENST00000525209 DHX57Q6P158 1386 aaKnown RBP3.84□□□□□ -1.79
CD44-213ENST00000525209 CEMIPQ8WUJ3 1361 aa3.84□□□□□ -1.79
CD44-213ENST00000525209 KIAA0232Q92628 1395 aa3.84□□□□□ -1.79
CD44-213ENST00000525209 TECPR2O15040 1411 aa3.84□□□□□ -1.79
CD44-213ENST00000525209 MYOM2P54296 1465 aa3.84□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms