RNA–Protein interactions for RNA: ENST00000524927.1

NEDD8-203, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2 BASIC

Gene NEDD8, Length 653 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-203ENST00000524927 NEIL2Q969S2 332 aa5.63□□□□□ -1.51
NEDD8-203ENST00000524927 TIMD4Q96H15 378 aa5.63□□□□□ -1.51
NEDD8-203ENST00000524927 VPS39Q96JC1 886 aa5.63□□□□□ -1.51
NEDD8-203ENST00000524927 ARL5BQ96KC2 179 aa5.63□□□□□ -1.51
NEDD8-203ENST00000524927 BIRC8Q96P09 236 aa5.63□□□□□ -1.51
NEDD8-203ENST00000524927 MS4A10Q96PG2 267 aa5.63□□□□□ -1.51
NEDD8-203ENST00000524927 ZNF385AQ96PM9 386 aaKnown RBP5.63□□□□□ -1.51
NEDD8-203ENST00000524927 GAL3ST1Q99999 423 aa5.63□□□□□ -1.51
NEDD8-203ENST00000524927 LRRC1Q9BTT6 524 aa5.63□□□□□ -1.51
NEDD8-203ENST00000524927 RPF2Q9H7B2 306 aaKnown RBP5.63□□□□□ -1.51
NEDD8-203ENST00000524927 CXorf21Q9HAI6 301 aa5.63□□□□□ -1.51
NEDD8-203ENST00000524927 PELI2Q9HAT8 420 aa5.63□□□□□ -1.51
NEDD8-203ENST00000524927 PFDN4Q9NQP4 134 aa5.63□□□□□ -1.51
NEDD8-203ENST00000524927 SDHAF3Q9NRP4 125 aa5.63□□□□□ -1.51
NEDD8-203ENST00000524927 MED11Q9P086 117 aa5.63□□□□□ -1.51
NEDD8-203ENST00000524927 IL20RAQ9UHF4 553 aa5.63□□□□□ -1.51
NEDD8-203ENST00000524927 RWDD2AQ9UIY3 292 aa5.63□□□□□ -1.51
NEDD8-203ENST00000524927 CFL2Q9Y281 166 aa5.63□□□□□ -1.51
NEDD8-203ENST00000524927 C15orf62A8K5M9 175 aa5.62□□□□□ -1.51
NEDD8-203ENST00000524927 C17orf51A8MQB3 221 aa5.62□□□□□ -1.51
NEDD8-203ENST00000524927 ZNF724A8MTY0 619 aa5.62□□□□□ -1.51
NEDD8-203ENST00000524927 EEDO75530 441 aaKnown RBP5.62□□□□□ -1.51
NEDD8-203ENST00000524927 GPR75O95800 540 aa5.62□□□□□ -1.51
NEDD8-203ENST00000524927 IGHV4-59P01825 116 aa5.62□□□□□ -1.51
NEDD8-203ENST00000524927 ALPLP05186 524 aa5.62□□□□□ -1.51
NEDD8-203ENST00000524927 LINGO3P0C6S8 592 aa5.62□□□□□ -1.51
NEDD8-203ENST00000524927 SLC35E2BP0CK96 405 aa5.62□□□□□ -1.51
NEDD8-203ENST00000524927 DRD5P21918 477 aa5.62□□□□□ -1.51
NEDD8-203ENST00000524927 ME2P23368 584 aa5.62□□□□□ -1.51
NEDD8-203ENST00000524927 PSMB4P28070 264 aa5.62□□□□□ -1.51
NEDD8-203ENST00000524927 CD80P33681 288 aa5.62□□□□□ -1.51
NEDD8-203ENST00000524927 IER3P46695 156 aa5.62□□□□□ -1.51
NEDD8-203ENST00000524927 ZNF75DP51815 510 aa5.62□□□□□ -1.51
NEDD8-203ENST00000524927 BRWD1-AS2P59051 145 aa5.62□□□□□ -1.51
NEDD8-203ENST00000524927 SEC61A1P61619 476 aaKnown RBP5.62□□□□□ -1.51
NEDD8-203ENST00000524927 DYNLT1P63172 113 aa5.62□□□□□ -1.51
NEDD8-203ENST00000524927 NAAAQ02083 359 aa5.62□□□□□ -1.51
NEDD8-203ENST00000524927 GTF2H2Q13888 395 aa5.62□□□□□ -1.51
NEDD8-203ENST00000524927 LGSNQ5TDP6 509 aa5.62□□□□□ -1.51
NEDD8-203ENST00000524927 SLC35E4Q6ICL7 350 aa5.62□□□□□ -1.51
NEDD8-203ENST00000524927 GTF2H2CQ6P1K8 395 aa5.62□□□□□ -1.51
NEDD8-203ENST00000524927 RBPMS2Q6ZRY4 209 aaKnown RBP5.62□□□□□ -1.51
NEDD8-203ENST00000524927 RAPH1Q70E73 1250 aa5.62□□□□□ -1.51
NEDD8-203ENST00000524927 KLHDC8BQ8IXV7 354 aa5.62□□□□□ -1.51
NEDD8-203ENST00000524927 UBE2J2Q8N2K1 259 aa5.62□□□□□ -1.51
NEDD8-203ENST00000524927 GTPBP8Q8N3Z3 284 aaPredicted RBP5.62□□□□□ -1.51
NEDD8-203ENST00000524927 GBGT1Q8N5D6 347 aa5.62□□□□□ -1.51
NEDD8-203ENST00000524927 KLHDC1Q8N7A1 406 aa5.62□□□□□ -1.51
NEDD8-203ENST00000524927 PRELID2Q8N945 189 aa5.62□□□□□ -1.51
NEDD8-203ENST00000524927 SPERTQ8NA61 448 aa5.62□□□□□ -1.51
NEDD8-203ENST00000524927 TMEM255BQ8WV15 326 aa5.62□□□□□ -1.51
NEDD8-203ENST00000524927 QKIQ96PU8 341 aaKnown RBP eCLIP5.62□□□□□ -1.51
NEDD8-203ENST00000524927 OR4K3Q96R72 315 aa5.62□□□□□ -1.51
NEDD8-203ENST00000524927 NAA11Q9BSU3 229 aaPredicted RBP5.62□□□□□ -1.51
NEDD8-203ENST00000524927 FNDC11Q9BVV2 318 aa5.62□□□□□ -1.51
NEDD8-203ENST00000524927 NOL11Q9H8H0 719 aaKnown RBP5.62□□□□□ -1.51
NEDD8-203ENST00000524927 CNOT10Q9H9A5 744 aaKnown RBP5.62□□□□□ -1.51
NEDD8-203ENST00000524927 HHATLQ9HCP6 504 aa5.62□□□□□ -1.51
NEDD8-203ENST00000524927 EQTNQ9NQ60 294 aa5.62□□□□□ -1.51
NEDD8-203ENST00000524927 SLC7A10Q9NS82 523 aa5.62□□□□□ -1.51
NEDD8-203ENST00000524927 MS4A12Q9NXJ0 267 aa5.62□□□□□ -1.51
NEDD8-203ENST00000524927 SELENONQ9NZV5 590 aa5.62□□□□□ -1.51
NEDD8-203ENST00000524927 GLS2Q9UI32 602 aa5.62□□□□□ -1.51
NEDD8-203ENST00000524927 OR2W1Q9Y3N9 320 aa5.62□□□□□ -1.51
NEDD8-203ENST00000524927 HACD1B0YJ81 288 aa5.61□□□□□ -1.51
NEDD8-203ENST00000524927 HNRNPCL2B2RXH8 293 aa5.61□□□□□ -1.51
NEDD8-203ENST00000524927 CLDN25C9JDP6 229 aa5.61□□□□□ -1.51
NEDD8-203ENST00000524927 XRCC3O43542 346 aa5.61□□□□□ -1.51
NEDD8-203ENST00000524927 LY6G6CO95867 125 aa5.61□□□□□ -1.51
NEDD8-203ENST00000524927 NGFRP08138 427 aa5.61□□□□□ -1.51
NEDD8-203ENST00000524927 TCN1P20061 433 aaPredicted RBP5.61□□□□□ -1.51
NEDD8-203ENST00000524927 CD22P20273 847 aa5.61□□□□□ -1.51
NEDD8-203ENST00000524927 CRYBB2P43320 205 aa5.61□□□□□ -1.51
NEDD8-203ENST00000524927 HSPB3Q12988 150 aa5.61□□□□□ -1.51
NEDD8-203ENST00000524927 GCNT6Q5T4J0 391 aa5.61□□□□□ -1.51
NEDD8-203ENST00000524927 DUPD1Q68J44 220 aa5.61□□□□□ -1.51
NEDD8-203ENST00000524927 CLEC6AQ6EIG7 209 aa5.61□□□□□ -1.51
NEDD8-203ENST00000524927 LRRN1Q6UXK5 716 aa5.61□□□□□ -1.51
NEDD8-203ENST00000524927 CYHR1Q6ZMK1 362 aa5.61□□□□□ -1.51
NEDD8-203ENST00000524927 Q75L30 129 aa5.61□□□□□ -1.51
NEDD8-203ENST00000524927 CENPVQ7Z7K6 275 aaPredicted RBP5.61□□□□□ -1.51
NEDD8-203ENST00000524927 ACOT4Q8N9L9 421 aa5.61□□□□□ -1.51
NEDD8-203ENST00000524927 KIF18AQ8NI77 898 aa5.61□□□□□ -1.51
NEDD8-203ENST00000524927 SCARB1Q8WTV0 552 aa5.61□□□□□ -1.51
NEDD8-203ENST00000524927 TMBIM1Q969X1 311 aa5.61□□□□□ -1.51
NEDD8-203ENST00000524927 ZNF479Q96JC4 524 aa5.61□□□□□ -1.51
NEDD8-203ENST00000524927 ZNF582Q96NG8 517 aaPredicted RBP5.61□□□□□ -1.51
NEDD8-203ENST00000524927 RAB3IPQ96QF0 476 aaPredicted RBP5.61□□□□□ -1.51
NEDD8-203ENST00000524927 NEURL2Q9BR09 285 aa5.61□□□□□ -1.51
NEDD8-203ENST00000524927 SRXN1Q9BYN0 137 aa5.61□□□□□ -1.51
NEDD8-203ENST00000524927 DPAGT1Q9H3H5 408 aa5.61□□□□□ -1.51
NEDD8-203ENST00000524927 MRGBPQ9NV56 204 aa5.61□□□□□ -1.51
NEDD8-203ENST00000524927 GALPQ9UBC7 116 aa5.61□□□□□ -1.51
NEDD8-203ENST00000524927 A0A087WZY1 265 aa5.6□□□□□ -1.51
NEDD8-203ENST00000524927 A8MXK9 166 aa5.6□□□□□ -1.51
NEDD8-203ENST00000524927 TRIM49D1C9J1S8 452 aa5.6□□□□□ -1.51
NEDD8-203ENST00000524927 H0YHG0 523 aa5.6□□□□□ -1.51
NEDD8-203ENST00000524927 PDLIM1O00151 329 aa5.6□□□□□ -1.51
NEDD8-203ENST00000524927 TSPAN2O60636 221 aa5.6□□□□□ -1.51
NEDD8-203ENST00000524927 RAMP3O60896 148 aa5.6□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms