RNA–Protein interactions for RNA: ENST00000523488.5

CSMD1-213, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 1 (best)

Gene CSMD1, Length 3,714 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-213ENST00000523488 ZBTB8AQ96BR9 441 aa7.61□□□□□ -1.19
CSMD1-213ENST00000523488 AKR1E2Q96JD6 320 aa7.61□□□□□ -1.19
CSMD1-213ENST00000523488 SPOCK3Q9BQ16 436 aa7.61□□□□□ -1.19
CSMD1-213ENST00000523488 CHRNA9Q9UGM1 479 aa7.61□□□□□ -1.19
CSMD1-213ENST00000523488 KPTNQ9Y664 436 aa7.61□□□□□ -1.19
CSMD1-213ENST00000523488 LTBP2Q14767 1821 aa7.61□□□□□ -1.19
CSMD1-213ENST00000523488 C9JQL5 133 aa7.61□□□□□ -1.19
CSMD1-213ENST00000523488 CLDN4O14493 209 aa7.61□□□□□ -1.19
CSMD1-213ENST00000523488 DAOP14920 347 aa7.61□□□□□ -1.19
CSMD1-213ENST00000523488 SGSHP51688 502 aa7.61□□□□□ -1.19
CSMD1-213ENST00000523488 LBX1P52954 281 aa7.61□□□□□ -1.19
CSMD1-213ENST00000523488 DVL1P1P54792 670 aaPredicted RBP7.61□□□□□ -1.19
CSMD1-213ENST00000523488 HTRA4P83105 476 aaPredicted RBP7.61□□□□□ -1.19
CSMD1-213ENST00000523488 PLAURQ03405 335 aa7.61□□□□□ -1.19
CSMD1-213ENST00000523488 PRDX4Q13162 271 aa7.61□□□□□ -1.19
CSMD1-213ENST00000523488 NR0B2Q15466 257 aa7.61□□□□□ -1.19
CSMD1-213ENST00000523488 ACTBL2Q562R1 376 aa7.61□□□□□ -1.19
CSMD1-213ENST00000523488 YOD1Q5VVQ6 348 aaPredicted RBP7.61□□□□□ -1.19
CSMD1-213ENST00000523488 WDR88Q6ZMY6 472 aa7.61□□□□□ -1.19
CSMD1-213ENST00000523488 NUP54Q7Z3B4 507 aa7.61□□□□□ -1.19
CSMD1-213ENST00000523488 NRROSQ86YC3 692 aa7.61□□□□□ -1.19
CSMD1-213ENST00000523488 CYB561A3Q8NBI2 242 aa7.61□□□□□ -1.19
CSMD1-213ENST00000523488 OR5L2Q8NGL0 311 aa7.61□□□□□ -1.19
CSMD1-213ENST00000523488 OR13C8Q8NGS7 320 aa7.61□□□□□ -1.19
CSMD1-213ENST00000523488 OR4C6Q8NH72 309 aa7.61□□□□□ -1.19
CSMD1-213ENST00000523488 RHBDD1Q8TEB9 315 aa7.61□□□□□ -1.19
CSMD1-213ENST00000523488 OR8D1Q8WZ84 308 aa7.61□□□□□ -1.19
CSMD1-213ENST00000523488 MS4A4AQ96JQ5 239 aa7.61□□□□□ -1.19
CSMD1-213ENST00000523488 ASB16Q96NS5 453 aa7.61□□□□□ -1.19
CSMD1-213ENST00000523488 ADAM2Q99965 735 aa7.61□□□□□ -1.19
CSMD1-213ENST00000523488 PDCD1LG2Q9BQ51 273 aa7.61□□□□□ -1.19
CSMD1-213ENST00000523488 SOX7Q9BT81 388 aa7.61□□□□□ -1.19
CSMD1-213ENST00000523488 SLC5A7Q9GZV3 580 aa7.61□□□□□ -1.19
CSMD1-213ENST00000523488 LMAN2LQ9H0V9 348 aa7.61□□□□□ -1.19
CSMD1-213ENST00000523488 ATG5Q9H1Y0 275 aa7.61□□□□□ -1.19
CSMD1-213ENST00000523488 PISDQ9UG56 409 aa7.61□□□□□ -1.19
CSMD1-213ENST00000523488 SIGLEC7Q9Y286 467 aa7.61□□□□□ -1.19
CSMD1-213ENST00000523488 TRAV18A0A075B6X5 111 aa7.6□□□□□ -1.19
CSMD1-213ENST00000523488 PQBP1O60828 265 aaKnown RBP7.6□□□□□ -1.19
CSMD1-213ENST00000523488 LDB3O75112 727 aa7.6□□□□□ -1.19
CSMD1-213ENST00000523488 AMY2AP04746 511 aa7.6□□□□□ -1.19
CSMD1-213ENST00000523488 FSTP19883 344 aa7.6□□□□□ -1.19
CSMD1-213ENST00000523488 MAOAP21397 527 aa7.6□□□□□ -1.19
CSMD1-213ENST00000523488 VAMP1P23763 118 aa7.6□□□□□ -1.19
CSMD1-213ENST00000523488 FLT3LGP49771 235 aa7.6□□□□□ -1.19
CSMD1-213ENST00000523488 PDLIM4P50479 330 aa7.6□□□□□ -1.19
CSMD1-213ENST00000523488 ATP1B3P54709 279 aa7.6□□□□□ -1.19
CSMD1-213ENST00000523488 SKP1P63208 163 aa7.6□□□□□ -1.19
CSMD1-213ENST00000523488 PDZD11Q5EBL8 140 aa7.6□□□□□ -1.19
CSMD1-213ENST00000523488 ZNF529Q6P280 563 aa7.6□□□□□ -1.19
CSMD1-213ENST00000523488 GLB1LQ6UWU2 654 aa7.6□□□□□ -1.19
CSMD1-213ENST00000523488 GDF7Q7Z4P5 450 aa7.6□□□□□ -1.19
CSMD1-213ENST00000523488 GRASPQ7Z6J2 395 aaPredicted RBP7.6□□□□□ -1.19
CSMD1-213ENST00000523488 UBE3DQ7Z6J8 389 aa7.6□□□□□ -1.19
CSMD1-213ENST00000523488 TMPRSS12Q86WS5 348 aa7.6□□□□□ -1.19
CSMD1-213ENST00000523488 KLK6Q92876 244 aa7.6□□□□□ -1.19
CSMD1-213ENST00000523488 FOXRED1Q96CU9 486 aaPredicted RBP7.6□□□□□ -1.19
CSMD1-213ENST00000523488 F2RL3Q96RI0 385 aa7.6□□□□□ -1.19
CSMD1-213ENST00000523488 CD180Q99467 661 aa7.6□□□□□ -1.19
CSMD1-213ENST00000523488 ACTR3CQ9C0K3 210 aaPredicted RBP7.6□□□□□ -1.19
CSMD1-213ENST00000523488 SH2B3Q9UQQ2 575 aa7.6□□□□□ -1.19
CSMD1-213ENST00000523488 HSFX4A0A1B0GTS1 333 aaPredicted RBP7.6□□□□□ -1.19
CSMD1-213ENST00000523488 HSFX3A0A1B0GWH4 333 aaPredicted RBP7.6□□□□□ -1.19
CSMD1-213ENST00000523488 MED6O75586 246 aa7.6□□□□□ -1.19
CSMD1-213ENST00000523488 RAB3DO95716 219 aa7.6□□□□□ -1.19
CSMD1-213ENST00000523488 HLA-AP01891 365 aaKnown RBP7.6□□□□□ -1.19
CSMD1-213ENST00000523488 RPN2P04844 631 aa7.6□□□□□ -1.19
CSMD1-213ENST00000523488 GYPBP06028 91 aa7.6□□□□□ -1.19
CSMD1-213ENST00000523488 DCNP07585 359 aaKnown RBP7.6□□□□□ -1.19
CSMD1-213ENST00000523488 SPARCP09486 303 aa7.6□□□□□ -1.19
CSMD1-213ENST00000523488 ATP1B2P14415 290 aaPredicted RBP7.6□□□□□ -1.19
CSMD1-213ENST00000523488 PGAM2P15259 253 aa7.6□□□□□ -1.19
CSMD1-213ENST00000523488 IGFBP3P17936 291 aaPredicted RBP7.6□□□□□ -1.19
CSMD1-213ENST00000523488 PRSS3P35030 304 aa7.6□□□□□ -1.19
CSMD1-213ENST00000523488 PSMB10P40306 273 aa7.6□□□□□ -1.19
CSMD1-213ENST00000523488 KHKP50053 298 aa7.6□□□□□ -1.19
CSMD1-213ENST00000523488 LSM6P62312 80 aaKnown RBP7.6□□□□□ -1.19
CSMD1-213ENST00000523488 EIF5AP63241 154 aaKnown RBP7.6□□□□□ -1.19
CSMD1-213ENST00000523488 ZIC1Q15915 447 aa7.6□□□□□ -1.19
CSMD1-213ENST00000523488 FNDC3BQ53EP0 1204 aaKnown RBP7.6□□□□□ -1.19
CSMD1-213ENST00000523488 ADGRF1Q5T601 910 aa7.6□□□□□ -1.19
CSMD1-213ENST00000523488 TPRG1Q6ZUI0 275 aa7.6□□□□□ -1.19
CSMD1-213ENST00000523488 MCHR1Q99705 422 aa7.6□□□□□ -1.19
CSMD1-213ENST00000523488 MS4A8Q9BY19 250 aa7.6□□□□□ -1.19
CSMD1-213ENST00000523488 OR52D1Q9H346 318 aa7.6□□□□□ -1.19
CSMD1-213ENST00000523488 FARSAQ9Y285 508 aaKnown RBP7.6□□□□□ -1.19
CSMD1-213ENST00000523488 A0A0A6YYC8 382 aaPredicted RBP7.6□□□□□ -1.19
CSMD1-213ENST00000523488 OR2AG2A6NM03 316 aa7.6□□□□□ -1.19
CSMD1-213ENST00000523488 A8MWP6 167 aa7.6□□□□□ -1.19
CSMD1-213ENST00000523488 I3L1I5 382 aaPredicted RBP7.6□□□□□ -1.19
CSMD1-213ENST00000523488 PLPP1O14494 284 aa7.6□□□□□ -1.19
CSMD1-213ENST00000523488 NTN1O95631 604 aa7.6□□□□□ -1.19
CSMD1-213ENST00000523488 F10P00742 488 aa7.6□□□□□ -1.19
CSMD1-213ENST00000523488 ADH6P28332 368 aa7.6□□□□□ -1.19
CSMD1-213ENST00000523488 PBLDP30039 288 aaPredicted RBP7.6□□□□□ -1.19
CSMD1-213ENST00000523488 SOX2P48431 317 aa7.6□□□□□ -1.19
CSMD1-213ENST00000523488 TTLL10Q6ZVT0 673 aa7.6□□□□□ -1.19
CSMD1-213ENST00000523488 C5orf24Q7Z6I8 188 aa7.6□□□□□ -1.19
CSMD1-213ENST00000523488 PEG10Q86TG7 708 aaKnown RBP7.6□□□□□ -1.19
CSMD1-213ENST00000523488 OR4K17Q8NGC6 315 aa7.6□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms