RNA–Protein interactions for RNA: ENST00000523088.5

HDAC3-216, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 699 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-216ENST00000523088 TRAV39A0A0B4J263 110 aa6.83□□□□□ -1.32
HDAC3-216ENST00000523088 A0A1B0GVI7 797 aa6.83□□□□□ -1.32
HDAC3-216ENST00000523088 ATP6AP2A0A1C7CYW4 349 aa6.83□□□□□ -1.32
HDAC3-216ENST00000523088 A0A1W2PP55 124 aa6.83□□□□□ -1.32
HDAC3-216ENST00000523088 CPED1A4D0V7 1026 aa6.83□□□□□ -1.32
HDAC3-216ENST00000523088 PRR19A6NJB7 356 aa6.83□□□□□ -1.32
HDAC3-216ENST00000523088 RPL36A-HNRNPH2H7BZ11 118 aa6.83□□□□□ -1.32
HDAC3-216ENST00000523088 WNT9AO14904 365 aa6.83□□□□□ -1.32
HDAC3-216ENST00000523088 RAB29O14966 203 aa6.83□□□□□ -1.32
HDAC3-216ENST00000523088 MAGEB4O15481 346 aaPredicted RBP6.83□□□□□ -1.32
HDAC3-216ENST00000523088 TNFSF14O43557 240 aa6.83□□□□□ -1.32
HDAC3-216ENST00000523088 LATO43561 262 aa6.83□□□□□ -1.32
HDAC3-216ENST00000523088 SSNA1O43805 119 aa6.83□□□□□ -1.32
HDAC3-216ENST00000523088 CA11O75493 328 aa6.83□□□□□ -1.32
HDAC3-216ENST00000523088 SLC16A8O95907 504 aa6.83□□□□□ -1.32
HDAC3-216ENST00000523088 IGSF6O95976 241 aa6.83□□□□□ -1.32
HDAC3-216ENST00000523088 IGHG4P01861 327 aa6.83□□□□□ -1.32
HDAC3-216ENST00000523088 NME1P15531 152 aaKnown RBP6.83□□□□□ -1.32
HDAC3-216ENST00000523088 AK4P27144 223 aaPredicted RBP6.83□□□□□ -1.32
HDAC3-216ENST00000523088 CD38P28907 300 aa6.83□□□□□ -1.32
HDAC3-216ENST00000523088 GGT5P36269 586 aa6.83□□□□□ -1.32
HDAC3-216ENST00000523088 COILP38432 576 aaPredicted RBP6.83□□□□□ -1.32
HDAC3-216ENST00000523088 LIPAP38571 399 aa6.83□□□□□ -1.32
HDAC3-216ENST00000523088 LGALS7P47929 136 aa6.83□□□□□ -1.32
HDAC3-216ENST00000523088 AGTR2P50052 363 aa6.83□□□□□ -1.32
HDAC3-216ENST00000523088 TNFSF10P50591 281 aa6.83□□□□□ -1.32
HDAC3-216ENST00000523088 RAB7AP51149 207 aa6.83□□□□□ -1.32
HDAC3-216ENST00000523088 GALCP54803 685 aa6.83□□□□□ -1.32
HDAC3-216ENST00000523088 ERVFC1-1P60608 527 aa6.83□□□□□ -1.32
HDAC3-216ENST00000523088 TLE1Q04724 770 aa6.83□□□□□ -1.32
HDAC3-216ENST00000523088 SRSF4Q08170 494 aaKnown RBP6.83□□□□□ -1.32
HDAC3-216ENST00000523088 IL11RAQ14626 422 aa6.83□□□□□ -1.32
HDAC3-216ENST00000523088 PEA15Q15121 130 aa6.83□□□□□ -1.32
HDAC3-216ENST00000523088 CTF1Q16619 201 aa6.83□□□□□ -1.32
HDAC3-216ENST00000523088 HLA-BQ31612 363 aa6.83□□□□□ -1.32
HDAC3-216ENST00000523088 PLPPR5Q32ZL2 321 aa6.83□□□□□ -1.32
HDAC3-216ENST00000523088 OCIAD2Q56VL3 154 aa6.83□□□□□ -1.32
HDAC3-216ENST00000523088 COX20Q5RI15 118 aa6.83□□□□□ -1.32
HDAC3-216ENST00000523088 COL5A1-AS1Q5SY13 56 aa6.83□□□□□ -1.32
HDAC3-216ENST00000523088 ABHD17BQ5VST6 288 aa6.83□□□□□ -1.32
HDAC3-216ENST00000523088 NXNL2Q5VZ03 156 aa6.83□□□□□ -1.32
HDAC3-216ENST00000523088 GLYATQ6IB77 296 aa6.83□□□□□ -1.32
HDAC3-216ENST00000523088 SLC29A4Q7RTT9 530 aa6.83□□□□□ -1.32
HDAC3-216ENST00000523088 DPY19L4Q7Z388 723 aa6.83□□□□□ -1.32
HDAC3-216ENST00000523088 CIR1Q86X95 450 aaPredicted RBP6.83□□□□□ -1.32
HDAC3-216ENST00000523088 RIMKLAQ8IXN7 391 aa6.83□□□□□ -1.32
HDAC3-216ENST00000523088 PDZD9Q8IXQ8 264 aa6.83□□□□□ -1.32
HDAC3-216ENST00000523088 H1FOOQ8IZA3 346 aaPredicted RBP6.83□□□□□ -1.32
HDAC3-216ENST00000523088 RNF148Q8N7C7 305 aa6.83□□□□□ -1.32
HDAC3-216ENST00000523088 PNLDC1Q8NA58 520 aaKnown RBP6.83□□□□□ -1.32
HDAC3-216ENST00000523088 SIDT2Q8NBJ9 832 aaKnown RBP6.83□□□□□ -1.32
HDAC3-216ENST00000523088 OR2AK2Q8NG84 335 aa6.83□□□□□ -1.32
HDAC3-216ENST00000523088 OR4E2Q8NGC2 313 aa6.83□□□□□ -1.32
HDAC3-216ENST00000523088 OR13C4Q8NGS5 318 aa6.83□□□□□ -1.32
HDAC3-216ENST00000523088 OR2G2Q8NGZ5 317 aa6.83□□□□□ -1.32
HDAC3-216ENST00000523088 MRAPQ8TCY5 172 aa6.83□□□□□ -1.32
HDAC3-216ENST00000523088 ADGRG7Q96K78 797 aa6.83□□□□□ -1.32
HDAC3-216ENST00000523088 ZNF583Q96ND8 569 aa6.83□□□□□ -1.32
HDAC3-216ENST00000523088 CSF3RQ99062 836 aa6.83□□□□□ -1.32
HDAC3-216ENST00000523088 AGPAT1Q99943 283 aa6.83□□□□□ -1.32
HDAC3-216ENST00000523088 SCNM1Q9BWG6 230 aa6.83□□□□□ -1.32
HDAC3-216ENST00000523088 SLIRPQ9GZT3 109 aaKnown RBP6.83□□□□□ -1.32
HDAC3-216ENST00000523088 C6orf106Q9H6K1 298 aaPredicted RBP6.83□□□□□ -1.32
HDAC3-216ENST00000523088 ACP6Q9NPH0 428 aa6.83□□□□□ -1.32
HDAC3-216ENST00000523088 FGF21Q9NSA1 209 aa6.83□□□□□ -1.32
HDAC3-216ENST00000523088 PIGVQ9NUD9 493 aa6.83□□□□□ -1.32
HDAC3-216ENST00000523088 SLC2A8Q9NY64 477 aa6.83□□□□□ -1.32
HDAC3-216ENST00000523088 KCNK4Q9NYG8 393 aa6.83□□□□□ -1.32
HDAC3-216ENST00000523088 ZNF391Q9UJN7 358 aa6.83□□□□□ -1.32
HDAC3-216ENST00000523088 NENFQ9UMX5 172 aa6.83□□□□□ -1.32
HDAC3-216ENST00000523088 POMPQ9Y244 141 aa6.83□□□□□ -1.32
HDAC3-216ENST00000523088 B3GALT5Q9Y2C3 310 aa6.83□□□□□ -1.32
HDAC3-216ENST00000523088 SLC35A3Q9Y2D2 325 aa6.83□□□□□ -1.32
HDAC3-216ENST00000523088 PTRH2Q9Y3E5 179 aaKnown RBP6.83□□□□□ -1.32
HDAC3-216ENST00000523088 USP24Q9UPU5 2620 aa6.83□□□□□ -1.32
HDAC3-216ENST00000523088 A0A087WUJ7 227 aa6.82□□□□□ -1.32
HDAC3-216ENST00000523088 A0A096LPI6 279 aa6.82□□□□□ -1.32
HDAC3-216ENST00000523088 GLYATL1P3A0A0U1RQE8 302 aa6.82□□□□□ -1.32
HDAC3-216ENST00000523088 SPAARA0A1B0GVQ0 90 aa6.82□□□□□ -1.32
HDAC3-216ENST00000523088 A0A1B0GVT2 93 aa6.82□□□□□ -1.32
HDAC3-216ENST00000523088 OR5H14A6NHG9 310 aa6.82□□□□□ -1.32
HDAC3-216ENST00000523088 VSTM2BA6NLU5 285 aa6.82□□□□□ -1.32
HDAC3-216ENST00000523088 ISM1B1AKI9 464 aa6.82□□□□□ -1.32
HDAC3-216ENST00000523088 DVL1O14640 695 aa6.82□□□□□ -1.32
HDAC3-216ENST00000523088 MYL12BO14950 172 aa6.82□□□□□ -1.32
HDAC3-216ENST00000523088 PLRG1O43660 514 aaKnown RBP6.82□□□□□ -1.32
HDAC3-216ENST00000523088 CSO75390 466 aaKnown RBP6.82□□□□□ -1.32
HDAC3-216ENST00000523088 GRAP2O75791 330 aa6.82□□□□□ -1.32
HDAC3-216ENST00000523088 ACTL6BO94805 426 aa6.82□□□□□ -1.32
HDAC3-216ENST00000523088 OR2C1O95371 312 aa6.82□□□□□ -1.32
HDAC3-216ENST00000523088 LCATP04180 440 aa6.82□□□□□ -1.32
HDAC3-216ENST00000523088 IGHV4-34P06331 123 aa6.82□□□□□ -1.32
HDAC3-216ENST00000523088 CD2P06729 351 aa6.82□□□□□ -1.32
HDAC3-216ENST00000523088 CRYGBP07316 175 aa6.82□□□□□ -1.32
HDAC3-216ENST00000523088 IL6RP08887 468 aaPredicted RBP6.82□□□□□ -1.32
HDAC3-216ENST00000523088 FTH1P19P0C7X4 201 aa6.82□□□□□ -1.32
HDAC3-216ENST00000523088 PET100P0DJ07 73 aa6.82□□□□□ -1.32
HDAC3-216ENST00000523088 ZNF44P15621 663 aa6.82□□□□□ -1.32
HDAC3-216ENST00000523088 AKR1C4P17516 323 aa6.82□□□□□ -1.32
HDAC3-216ENST00000523088 GPX2P18283 190 aa6.82□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms