RNA–Protein interactions for RNA: ENST00000522227.5

CTNNA1-234, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 642 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-234ENST00000522227 WDR88Q6ZMY6 472 aa9.11□□□□□ -0.95
CTNNA1-234ENST00000522227 FRMD7Q6ZUT3 714 aa9.11□□□□□ -0.95
CTNNA1-234ENST00000522227 RFPL4BQ6ZWI9 263 aa9.11□□□□□ -0.95
CTNNA1-234ENST00000522227 NLRC3Q7RTR2 1065 aa9.11□□□□□ -0.95
CTNNA1-234ENST00000522227 ZNF440Q8IYI8 595 aa9.11□□□□□ -0.95
CTNNA1-234ENST00000522227 PIP4P2Q8N4L2 257 aa9.11□□□□□ -0.95
CTNNA1-234ENST00000522227 C19orf18Q8NEA5 215 aa9.11□□□□□ -0.95
CTNNA1-234ENST00000522227 PPP1R35Q8TAP8 253 aa9.11□□□□□ -0.95
CTNNA1-234ENST00000522227 OIT3Q8WWZ8 545 aa9.11□□□□□ -0.95
CTNNA1-234ENST00000522227 COQ8BQ96D53 544 aa9.11□□□□□ -0.95
CTNNA1-234ENST00000522227 WDFY2Q96P53 400 aa9.11□□□□□ -0.95
CTNNA1-234ENST00000522227 ASCL2Q99929 193 aa9.11□□□□□ -0.95
CTNNA1-234ENST00000522227 SLC38A1Q9H2H9 487 aa9.11□□□□□ -0.95
CTNNA1-234ENST00000522227 PALMDQ9NP74 551 aa9.11□□□□□ -0.95
CTNNA1-234ENST00000522227 NINJ2Q9NZG7 142 aa9.11□□□□□ -0.95
CTNNA1-234ENST00000522227 NOP53Q9NZM5 478 aaKnown RBP9.11□□□□□ -0.95
CTNNA1-234ENST00000522227 DNAJB11Q9UBS4 358 aa9.11□□□□□ -0.95
CTNNA1-234ENST00000522227 OPN1SWP03999 348 aa9.1□□□□□ -0.95
CTNNA1-234ENST00000522227 AHCYP23526 432 aa9.1□□□□□ -0.95
CTNNA1-234ENST00000522227 STOMP27105 288 aa9.1□□□□□ -0.95
CTNNA1-234ENST00000522227 CHI3L1P36222 383 aaPredicted RBP9.1□□□□□ -0.95
CTNNA1-234ENST00000522227 LIPAP38571 399 aa9.1□□□□□ -0.95
CTNNA1-234ENST00000522227 BIDP55957 195 aa9.1□□□□□ -0.95
CTNNA1-234ENST00000522227 PPP1CBP62140 327 aa9.1□□□□□ -0.95
CTNNA1-234ENST00000522227 ARF6P62330 175 aa9.1□□□□□ -0.95
CTNNA1-234ENST00000522227 COX10Q12887 443 aa9.1□□□□□ -0.95
CTNNA1-234ENST00000522227 LY6EQ16553 131 aa9.1□□□□□ -0.95
CTNNA1-234ENST00000522227 SLC36A2Q495M3 483 aa9.1□□□□□ -0.95
CTNNA1-234ENST00000522227 ZMAT1Q5H9K5 638 aa9.1□□□□□ -0.95
CTNNA1-234ENST00000522227 PABPC1L2AQ5JQF8 200 aa9.1□□□□□ -0.95
CTNNA1-234ENST00000522227 METTL11BQ5VVY1 283 aa9.1□□□□□ -0.95
CTNNA1-234ENST00000522227 MBNL2Q5VZF2 373 aaKnown RBP9.1□□□□□ -0.95
CTNNA1-234ENST00000522227 ZNF836Q6ZNA1 936 aa9.1□□□□□ -0.95
CTNNA1-234ENST00000522227 Q6ZR03 302 aa9.1□□□□□ -0.95
CTNNA1-234ENST00000522227 ANKRD46Q86W74 232 aa9.1□□□□□ -0.95
CTNNA1-234ENST00000522227 MIPOL1Q8TD10 442 aa9.1□□□□□ -0.95
CTNNA1-234ENST00000522227 OR2V2Q96R30 315 aa9.1□□□□□ -0.95
CTNNA1-234ENST00000522227 CITED2Q99967 270 aaPredicted RBP9.1□□□□□ -0.95
CTNNA1-234ENST00000522227 TMEM38BQ9NVV0 291 aa9.1□□□□□ -0.95
CTNNA1-234ENST00000522227 TMED5Q9Y3A6 229 aa9.1□□□□□ -0.95
CTNNA1-234ENST00000522227 HYDINQ4G0P3 5121 aa9.1□□□□□ -0.95
CTNNA1-234ENST00000522227 A0A096LPI6 279 aa9.09□□□□□ -0.95
CTNNA1-234ENST00000522227 C11orf98E9PRG8 122 aa9.09□□□□□ -0.95
CTNNA1-234ENST00000522227 RNASEK-C17orf49H0YIS7 233 aa9.09□□□□□ -0.95
CTNNA1-234ENST00000522227 AZIN1O14977 448 aa9.09□□□□□ -0.95
CTNNA1-234ENST00000522227 DBIP07108 87 aaKnown RBP9.09□□□□□ -0.95
CTNNA1-234ENST00000522227 NHLRC4P0CG21 123 aaPredicted RBP9.09□□□□□ -0.95
CTNNA1-234ENST00000522227 MYL2P10916 166 aa9.09□□□□□ -0.95
CTNNA1-234ENST00000522227 PTMSP20962 102 aa9.09□□□□□ -0.95
CTNNA1-234ENST00000522227 ARRB2P32121 409 aa9.09□□□□□ -0.95
CTNNA1-234ENST00000522227 PAFAH1B1P43034 410 aa9.09□□□□□ -0.95
CTNNA1-234ENST00000522227 CRATP43155 626 aa9.09□□□□□ -0.95
CTNNA1-234ENST00000522227 FAM69AQ5T7M9 428 aa9.09□□□□□ -0.95
CTNNA1-234ENST00000522227 IL23RQ5VWK5 629 aa9.09□□□□□ -0.95
CTNNA1-234ENST00000522227 ZFAND6Q6FIF0 208 aa9.09□□□□□ -0.95
CTNNA1-234ENST00000522227 NDUFA11Q86Y39 141 aa9.09□□□□□ -0.95
CTNNA1-234ENST00000522227 PTOV1Q86YD1 416 aa9.09□□□□□ -0.95
CTNNA1-234ENST00000522227 CLIP4Q8N3C7 705 aa9.09□□□□□ -0.95
CTNNA1-234ENST00000522227 OR4C13Q8NGP0 309 aa9.09□□□□□ -0.95
CTNNA1-234ENST00000522227 OR2T6Q8NHC8 308 aa9.09□□□□□ -0.95
CTNNA1-234ENST00000522227 AKR7LQ8NHP1 331 aa9.09□□□□□ -0.95
CTNNA1-234ENST00000522227 CLPTM1LQ96KA5 538 aa9.09□□□□□ -0.95
CTNNA1-234ENST00000522227 ZNRD1Q9P1U0 126 aa9.09□□□□□ -0.95
CTNNA1-234ENST00000522227 MARCOQ9UEW3 520 aaPredicted RBP9.09□□□□□ -0.95
CTNNA1-234ENST00000522227 RPUSD1Q9UJJ7 312 aaKnown RBP9.09□□□□□ -0.95
CTNNA1-234ENST00000522227 DNAH1Q9P2D7 4330 aa9.09□□□□□ -0.95
CTNNA1-234ENST00000522227 LOC100509620A0A075B734 347 aa9.08□□□□□ -0.96
CTNNA1-234ENST00000522227 A0A087WUJ7 227 aa9.08□□□□□ -0.96
CTNNA1-234ENST00000522227 ADARB2-AS1A8MUL3 147 aa9.08□□□□□ -0.96
CTNNA1-234ENST00000522227 TMEM233B4DJY2 109 aa9.08□□□□□ -0.96
CTNNA1-234ENST00000522227 HMGN4O00479 90 aa9.08□□□□□ -0.96
CTNNA1-234ENST00000522227 CHEK2O96017 543 aa9.08□□□□□ -0.96
CTNNA1-234ENST00000522227 GUSBP08236 651 aa9.08□□□□□ -0.96
CTNNA1-234ENST00000522227 SNRPAP09012 282 aaKnown RBP9.08□□□□□ -0.96
CTNNA1-234ENST00000522227 FBP1P09467 338 aa9.08□□□□□ -0.96
CTNNA1-234ENST00000522227 NR2F1P10589 423 aa9.08□□□□□ -0.96
CTNNA1-234ENST00000522227 LYL1P12980 280 aa9.08□□□□□ -0.96
CTNNA1-234ENST00000522227 EPHA3P29320 983 aa9.08□□□□□ -0.96
CTNNA1-234ENST00000522227 GDI2P50395 445 aaKnown RBP9.08□□□□□ -0.96
CTNNA1-234ENST00000522227 PSG7Q13046 419 aa9.08□□□□□ -0.96
CTNNA1-234ENST00000522227 TAF11Q15544 211 aa9.08□□□□□ -0.96
CTNNA1-234ENST00000522227 LRFN4Q6PJG9 635 aa9.08□□□□□ -0.96
CTNNA1-234ENST00000522227 SERPINA11Q86U17 422 aa9.08□□□□□ -0.96
CTNNA1-234ENST00000522227 PEX5LQ8IYB4 626 aa9.08□□□□□ -0.96
CTNNA1-234ENST00000522227 NATD1Q8N6N6 113 aa9.08□□□□□ -0.96
CTNNA1-234ENST00000522227 C10orf53Q8N6V4 93 aa9.08□□□□□ -0.96
CTNNA1-234ENST00000522227 SCAIQ8N9R8 606 aa9.08□□□□□ -0.96
CTNNA1-234ENST00000522227 ATG16L2Q8NAA4 619 aa9.08□□□□□ -0.96
CTNNA1-234ENST00000522227 SLC38A4Q969I6 547 aa9.08□□□□□ -0.96
CTNNA1-234ENST00000522227 NKX3-1Q99801 234 aaPredicted RBP9.08□□□□□ -0.96
CTNNA1-234ENST00000522227 SIRPDQ9H106 197 aa9.08□□□□□ -0.96
CTNNA1-234ENST00000522227 MMADHCQ9H3L0 296 aaPredicted RBP9.08□□□□□ -0.96
CTNNA1-234ENST00000522227 MTHFD2LQ9H903 347 aaPredicted RBP9.08□□□□□ -0.96
CTNNA1-234ENST00000522227 GCM1Q9NP62 436 aa9.08□□□□□ -0.96
CTNNA1-234ENST00000522227 GLTPQ9NZD2 209 aa9.08□□□□□ -0.96
CTNNA1-234ENST00000522227 RPS6KB2Q9UBS0 482 aa9.08□□□□□ -0.96
CTNNA1-234ENST00000522227 LOC102725191A0A1B0GVB3 256 aa9.07□□□□□ -0.96
CTNNA1-234ENST00000522227 CDHR4A6H8M9 788 aa9.07□□□□□ -0.96
CTNNA1-234ENST00000522227 RBMY1BA6NDE4 496 aaKnown RBP9.07□□□□□ -0.96
CTNNA1-234ENST00000522227 RBMY1EA6NEQ0 496 aaKnown RBP9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms