RNA–Protein interactions for RNA: ENST00000522139.1

CNOT8-220, Transcript of CCR4-NOT transcription complex subunit 8, humanhuman

TSL 3

Gene CNOT8, Length 566 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT8-220ENST00000522139 ZNF221Q9UK13 617 aa4.39□□□□□ -1.71
CNOT8-220ENST00000522139 RAB23Q9ULC3 237 aa4.39□□□□□ -1.71
CNOT8-220ENST00000522139 PLCL2Q9UPR0 1127 aa4.39□□□□□ -1.71
CNOT8-220ENST00000522139 MGAT4BQ9UQ53 548 aa4.39□□□□□ -1.71
CNOT8-220ENST00000522139 FOXA2Q9Y261 457 aaPredicted RBP4.39□□□□□ -1.71
CNOT8-220ENST00000522139 RPL36Q9Y3U8 105 aaKnown RBP4.39□□□□□ -1.71
CNOT8-220ENST00000522139 AUP1Q9Y679 476 aa4.39□□□□□ -1.71
CNOT8-220ENST00000522139 TCF20Q9UGU0 1960 aaKnown RBP4.39□□□□□ -1.71
CNOT8-220ENST00000522139 PCM1Q15154 2024 aa4.38□□□□□ -1.71
CNOT8-220ENST00000522139 A0A087X002 238 aa4.38□□□□□ -1.71
CNOT8-220ENST00000522139 CCL15-CCL14A0A0B4J2E2 113 aa4.38□□□□□ -1.71
CNOT8-220ENST00000522139 GLYATL1P3A0A0U1RQE8 302 aa4.38□□□□□ -1.71
CNOT8-220ENST00000522139 TSPAN11A1L157 253 aa4.38□□□□□ -1.71
CNOT8-220ENST00000522139 ZNF840PA6NDX5 716 aa4.38□□□□□ -1.71
CNOT8-220ENST00000522139 TUBAL3A6NHL2 446 aa4.38□□□□□ -1.71
CNOT8-220ENST00000522139 SNTNA6NMZ2 147 aa4.38□□□□□ -1.71
CNOT8-220ENST00000522139 SGK494L7N484 410 aa4.38□□□□□ -1.71
CNOT8-220ENST00000522139 SCAMP2O15127 329 aaKnown RBP4.38□□□□□ -1.71
CNOT8-220ENST00000522139 PRKYO43930 277 aa4.38□□□□□ -1.71
CNOT8-220ENST00000522139 OR1I1O60431 355 aa4.38□□□□□ -1.71
CNOT8-220ENST00000522139 PSIP1O75475 530 aaKnown RBP4.38□□□□□ -1.71
CNOT8-220ENST00000522139 CLN5O75503 358 aa4.38□□□□□ -1.71
CNOT8-220ENST00000522139 GCM2O75603 506 aaPredicted RBP4.38□□□□□ -1.71
CNOT8-220ENST00000522139 CCNKO75909 580 aa4.38□□□□□ -1.71
CNOT8-220ENST00000522139 SLC25A14O95258 325 aaPredicted RBP4.38□□□□□ -1.71
CNOT8-220ENST00000522139 ZNF682O95780 498 aa4.38□□□□□ -1.71
CNOT8-220ENST00000522139 CLDN1O95832 211 aa4.38□□□□□ -1.71
CNOT8-220ENST00000522139 PDYNP01213 254 aa4.38□□□□□ -1.71
CNOT8-220ENST00000522139 IFI6P09912 130 aa4.38□□□□□ -1.71
CNOT8-220ENST00000522139 HIST1H2AGP0C0S8 130 aaPredicted RBP4.38□□□□□ -1.71
CNOT8-220ENST00000522139 OR56A5P0C7T3 313 aa4.38□□□□□ -1.71
CNOT8-220ENST00000522139 ATF6P18850 670 aa4.38□□□□□ -1.71
CNOT8-220ENST00000522139 IDSP22304 550 aa4.38□□□□□ -1.71
CNOT8-220ENST00000522139 GADD45AP24522 165 aa4.38□□□□□ -1.71
CNOT8-220ENST00000522139 SPAM1P38567 509 aa4.38□□□□□ -1.71
CNOT8-220ENST00000522139 CRYBB2P43320 205 aa4.38□□□□□ -1.71
CNOT8-220ENST00000522139 BRCC3P46736 316 aa4.38□□□□□ -1.71
CNOT8-220ENST00000522139 RGRP47804 291 aa4.38□□□□□ -1.71
CNOT8-220ENST00000522139 IST1P53990 364 aa4.38□□□□□ -1.71
CNOT8-220ENST00000522139 STARD6P59095 220 aa4.38□□□□□ -1.71
CNOT8-220ENST00000522139 PSPHP78330 225 aa4.38□□□□□ -1.71
CNOT8-220ENST00000522139 ST3GAL4Q11206 333 aa4.38□□□□□ -1.71
CNOT8-220ENST00000522139 DGCR6Q14129 220 aa4.38□□□□□ -1.71
CNOT8-220ENST00000522139 CCL15Q16663 113 aa4.38□□□□□ -1.71
CNOT8-220ENST00000522139 FAM106AQ4KMX7 169 aa4.38□□□□□ -1.71
CNOT8-220ENST00000522139 C10orf120Q5SQS8 335 aa4.38□□□□□ -1.71
CNOT8-220ENST00000522139 C12orf73Q69YU5 71 aa4.38□□□□□ -1.71
CNOT8-220ENST00000522139 PTRHD1Q6GMV3 140 aaKnown RBP4.38□□□□□ -1.71
CNOT8-220ENST00000522139 TCEAL6Q6IPX3 200 aa4.38□□□□□ -1.71
CNOT8-220ENST00000522139 TRIM40Q6P9F5 258 aa4.38□□□□□ -1.71
CNOT8-220ENST00000522139 DOK6Q6PKX4 331 aa4.38□□□□□ -1.71
CNOT8-220ENST00000522139 FIP1L1Q6UN15 594 aaKnown RBP4.38□□□□□ -1.71
CNOT8-220ENST00000522139 ISLR2Q6UXK2 745 aa4.38□□□□□ -1.71
CNOT8-220ENST00000522139 TPGS1Q6ZTW0 290 aa4.38□□□□□ -1.71
CNOT8-220ENST00000522139 NANOGNBQ7Z5D8 188 aa4.38□□□□□ -1.71
CNOT8-220ENST00000522139 RABEPKQ7Z6M1 372 aa4.38□□□□□ -1.71
CNOT8-220ENST00000522139 RAB43Q86YS6 212 aa4.38□□□□□ -1.71
CNOT8-220ENST00000522139 BBS7Q8IWZ6 715 aa4.38□□□□□ -1.71
CNOT8-220ENST00000522139 CYP4Z2PQ8N1L4 340 aa4.38□□□□□ -1.71
CNOT8-220ENST00000522139 ZFAND1Q8TCF1 268 aa4.38□□□□□ -1.71
CNOT8-220ENST00000522139 CXorf40AQ8TE69 158 aa4.38□□□□□ -1.71
CNOT8-220ENST00000522139 SETD7Q8WTS6 366 aaKnown RBP4.38□□□□□ -1.71
CNOT8-220ENST00000522139 SELENOMQ8WWX9 145 aa4.38□□□□□ -1.71
CNOT8-220ENST00000522139 DEDD2Q8WXF8 326 aa4.38□□□□□ -1.71
CNOT8-220ENST00000522139 ACOT12Q8WYK0 555 aa4.38□□□□□ -1.71
CNOT8-220ENST00000522139 SLC7A6Q92536 515 aa4.38□□□□□ -1.71
CNOT8-220ENST00000522139 UBE2E3Q969T4 207 aa4.38□□□□□ -1.71
CNOT8-220ENST00000522139 SLC25A46Q96AG3 418 aa4.38□□□□□ -1.71
CNOT8-220ENST00000522139 VPS35Q96QK1 796 aa4.38□□□□□ -1.71
CNOT8-220ENST00000522139 MARVELD1Q9BSK0 173 aa4.38□□□□□ -1.71
CNOT8-220ENST00000522139 EFCAB11Q9BUY7 163 aa4.38□□□□□ -1.71
CNOT8-220ENST00000522139 MND1Q9BWT6 205 aa4.38□□□□□ -1.71
CNOT8-220ENST00000522139 CLEC7AQ9BXN2 247 aa4.38□□□□□ -1.71
CNOT8-220ENST00000522139 SRRQ9GZT4 340 aa4.38□□□□□ -1.71
CNOT8-220ENST00000522139 SLC22A4Q9H015 551 aa4.38□□□□□ -1.71
CNOT8-220ENST00000522139 ELOVL6Q9H5J4 265 aa4.38□□□□□ -1.71
CNOT8-220ENST00000522139 ACER3Q9NUN7 267 aa4.38□□□□□ -1.71
CNOT8-220ENST00000522139 ACOXLQ9NUZ1 547 aa4.38□□□□□ -1.71
CNOT8-220ENST00000522139 MED17Q9NVC6 651 aa4.38□□□□□ -1.71
CNOT8-220ENST00000522139 CLN6Q9NWW5 311 aa4.38□□□□□ -1.71
CNOT8-220ENST00000522139 ZNF226Q9NYT6 803 aa4.38□□□□□ -1.71
CNOT8-220ENST00000522139 TAS2R9Q9NYW1 312 aa4.38□□□□□ -1.71
CNOT8-220ENST00000522139 MOSPD1Q9UJG1 213 aa4.38□□□□□ -1.71
CNOT8-220ENST00000522139 ZNF229Q9UJW7 825 aa4.38□□□□□ -1.71
CNOT8-220ENST00000522139 TBC1D24Q9ULP9 559 aa4.38□□□□□ -1.71
CNOT8-220ENST00000522139 ABCG2Q9UNQ0 655 aa4.38□□□□□ -1.71
CNOT8-220ENST00000522139 DIMT1Q9UNQ2 313 aaKnown RBP4.38□□□□□ -1.71
CNOT8-220ENST00000522139 GINS2Q9Y248 185 aa4.38□□□□□ -1.71
CNOT8-220ENST00000522139 KCNK6Q9Y257 313 aa4.38□□□□□ -1.71
CNOT8-220ENST00000522139 HS3ST2Q9Y278 367 aa4.38□□□□□ -1.71
CNOT8-220ENST00000522139 ETV7Q9Y603 341 aa4.38□□□□□ -1.71
CNOT8-220ENST00000522139 ENPP4Q9Y6X5 453 aa4.38□□□□□ -1.71
CNOT8-220ENST00000522139 V9GYH0 126 aa4.38□□□□□ -1.71
CNOT8-220ENST00000522139 PLXNA2O75051 1894 aa4.38□□□□□ -1.71
CNOT8-220ENST00000522139 NUP214P35658 2090 aaPredicted RBP4.37□□□□□ -1.71
CNOT8-220ENST00000522139 A0A0D9SEW6 157 aa4.37□□□□□ -1.71
CNOT8-220ENST00000522139 TRDV1A0A1B0GX56 115 aa4.37□□□□□ -1.71
CNOT8-220ENST00000522139 MEIOCA2RUB1 952 aa4.37□□□□□ -1.71
CNOT8-220ENST00000522139 PSMD11O00231 422 aa4.37□□□□□ -1.71
CNOT8-220ENST00000522139 TNFRSF11BO00300 401 aa4.37□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms