RNA–Protein interactions for RNA: ENST00000520909.5

CLK4-207, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 1,305 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-207ENST00000520909 ARHGAP11BQ3KRB8 267 aa3.42□□□□□ -1.86
CLK4-207ENST00000520909 IFI44LQ53G44 452 aa3.42□□□□□ -1.86
CLK4-207ENST00000520909 CT45A2Q5DJT8 189 aa3.42□□□□□ -1.86
CLK4-207ENST00000520909 ZNF311Q5JNZ3 666 aa3.42□□□□□ -1.86
CLK4-207ENST00000520909 DCST2Q5T1A1 773 aa3.42□□□□□ -1.86
CLK4-207ENST00000520909 PRAMEF8Q5VWM4 474 aa3.42□□□□□ -1.86
CLK4-207ENST00000520909 PRAMEF7Q5VXH5 474 aa3.42□□□□□ -1.86
CLK4-207ENST00000520909 LPCAT4Q643R3 524 aa3.42□□□□□ -1.86
CLK4-207ENST00000520909 TMEM205Q6UW68 189 aa3.42□□□□□ -1.86
CLK4-207ENST00000520909 NPSR1Q6W5P4 371 aa3.42□□□□□ -1.86
CLK4-207ENST00000520909 VRK2Q86Y07 508 aa3.42□□□□□ -1.86
CLK4-207ENST00000520909 ZDHHC21Q8IVQ6 265 aa3.42□□□□□ -1.86
CLK4-207ENST00000520909 PEX5LQ8IYB4 626 aa3.42□□□□□ -1.86
CLK4-207ENST00000520909 ESX1Q8N693 406 aa3.42□□□□□ -1.86
CLK4-207ENST00000520909 PAPD5Q8NDF8 572 aaKnown RBP3.42□□□□□ -1.86
CLK4-207ENST00000520909 ICA1LQ8NDH6 482 aa3.42□□□□□ -1.86
CLK4-207ENST00000520909 CHDHQ8NE62 594 aaPredicted RBP3.42□□□□□ -1.86
CLK4-207ENST00000520909 NFAM1Q8NET5 270 aaPredicted RBP3.42□□□□□ -1.86
CLK4-207ENST00000520909 OR2Y1Q8NGV0 311 aa3.42□□□□□ -1.86
CLK4-207ENST00000520909 ZNF721Q8TF20 911 aa3.42□□□□□ -1.86
CLK4-207ENST00000520909 GEMIN6Q8WXD5 167 aaKnown RBP3.42□□□□□ -1.86
CLK4-207ENST00000520909 PROX1Q92786 737 aa3.42□□□□□ -1.86
CLK4-207ENST00000520909 CENPNQ96H22 339 aaPredicted RBP3.42□□□□□ -1.86
CLK4-207ENST00000520909 GAL3ST4Q96RP7 486 aa3.42□□□□□ -1.86
CLK4-207ENST00000520909 STACQ99469 402 aa3.42□□□□□ -1.86
CLK4-207ENST00000520909 SDF2Q99470 211 aa3.42□□□□□ -1.86
CLK4-207ENST00000520909 LPAR4Q99677 370 aa3.42□□□□□ -1.86
CLK4-207ENST00000520909 SLX1AQ9BQ83 275 aa3.42□□□□□ -1.86
CLK4-207ENST00000520909 LMF2Q9BU23 707 aaKnown RBP3.42□□□□□ -1.86
CLK4-207ENST00000520909 DOHHQ9BU89 302 aa3.42□□□□□ -1.86
CLK4-207ENST00000520909 ITPAQ9BY32 194 aa3.42□□□□□ -1.86
CLK4-207ENST00000520909 SEMA6AQ9H2E6 1030 aa3.42□□□□□ -1.86
CLK4-207ENST00000520909 SLC38A1Q9H2H9 487 aa3.42□□□□□ -1.86
CLK4-207ENST00000520909 MAGIXQ9H6Y5 334 aa3.42□□□□□ -1.86
CLK4-207ENST00000520909 TRIM45Q9H8W5 580 aaPredicted RBP3.42□□□□□ -1.86
CLK4-207ENST00000520909 POLR1BQ9H9Y6 1135 aa3.42□□□□□ -1.86
CLK4-207ENST00000520909 BCL2L10Q9HD36 194 aa3.42□□□□□ -1.86
CLK4-207ENST00000520909 CALML5Q9NZT1 146 aa3.42□□□□□ -1.86
CLK4-207ENST00000520909 SEC14L3Q9UDX4 400 aa3.42□□□□□ -1.86
CLK4-207ENST00000520909 OR14J1Q9UGF5 321 aa3.42□□□□□ -1.86
CLK4-207ENST00000520909 RIMS3Q9UJD0 308 aa3.42□□□□□ -1.86
CLK4-207ENST00000520909 SLC13A4Q9UKG4 626 aa3.42□□□□□ -1.86
CLK4-207ENST00000520909 MKLN1Q9UL63 735 aa3.42□□□□□ -1.86
CLK4-207ENST00000520909 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP3.42□□□□□ -1.86
CLK4-207ENST00000520909 CFL2Q9Y281 166 aa3.42□□□□□ -1.86
CLK4-207ENST00000520909 FARSAQ9Y285 508 aaKnown RBP3.42□□□□□ -1.86
CLK4-207ENST00000520909 PADI2Q9Y2J8 665 aa3.42□□□□□ -1.86
CLK4-207ENST00000520909 SH3GLB1Q9Y371 365 aa3.42□□□□□ -1.86
CLK4-207ENST00000520909 WDR45Q9Y484 360 aa3.42□□□□□ -1.86
CLK4-207ENST00000520909 CFAP54Q96N23 3096 aa3.41□□□□□ -1.86
CLK4-207ENST00000520909 PRRC2AP48634 2157 aaKnown RBP3.41□□□□□ -1.86
CLK4-207ENST00000520909 NSG1A0A0A6YYJ2 146 aa3.41□□□□□ -1.86
CLK4-207ENST00000520909 TRBV11-1A0A0K0K1C0 115 aa3.41□□□□□ -1.86
CLK4-207ENST00000520909 LOC101059948A0A1B0GTJ6 334 aa3.41□□□□□ -1.86
CLK4-207ENST00000520909 FRG2CA6NGY1 282 aa3.41□□□□□ -1.86
CLK4-207ENST00000520909 HS6ST1O60243 411 aa3.41□□□□□ -1.86
CLK4-207ENST00000520909 KIAA0513O60268 411 aa3.41□□□□□ -1.86
CLK4-207ENST00000520909 RAD1O60671 282 aa3.41□□□□□ -1.86
CLK4-207ENST00000520909 E2F6O75461 281 aa3.41□□□□□ -1.86
CLK4-207ENST00000520909 REM1O75628 298 aa3.41□□□□□ -1.86
CLK4-207ENST00000520909 DIRAS1O95057 198 aa3.41□□□□□ -1.86
CLK4-207ENST00000520909 LGI1O95970 557 aa3.41□□□□□ -1.86
CLK4-207ENST00000520909 CST1P01037 141 aa3.41□□□□□ -1.86
CLK4-207ENST00000520909 NGFP01138 241 aa3.41□□□□□ -1.86
CLK4-207ENST00000520909 IGHEP01854 428 aa3.41□□□□□ -1.86
CLK4-207ENST00000520909 IFNW1P05000 195 aa3.41□□□□□ -1.86
CLK4-207ENST00000520909 FABP3P05413 133 aa3.41□□□□□ -1.86
CLK4-207ENST00000520909 DBIP07108 87 aaKnown RBP3.41□□□□□ -1.86
CLK4-207ENST00000520909 PABPC4LP0CB38 370 aaKnown RBP3.41□□□□□ -1.86
CLK4-207ENST00000520909 IL7RP16871 459 aa3.41□□□□□ -1.86
CLK4-207ENST00000520909 DRD5P21918 477 aa3.41□□□□□ -1.86
CLK4-207ENST00000520909 MMP11P24347 488 aa3.41□□□□□ -1.86
CLK4-207ENST00000520909 EPHA2P29317 976 aa3.41□□□□□ -1.86
CLK4-207ENST00000520909 CEACAM8P31997 349 aaPredicted RBP3.41□□□□□ -1.86
CLK4-207ENST00000520909 GCKP35557 465 aa3.41□□□□□ -1.86
CLK4-207ENST00000520909 KRT20P35900 424 aa3.41□□□□□ -1.86
CLK4-207ENST00000520909 DLSTP36957 453 aa3.41□□□□□ -1.86
CLK4-207ENST00000520909 VHLP40337 213 aa3.41□□□□□ -1.86
CLK4-207ENST00000520909 YAP1P46937 504 aaKnown RBP3.41□□□□□ -1.86
CLK4-207ENST00000520909 OR1E2P47887 323 aa3.41□□□□□ -1.86
CLK4-207ENST00000520909 DCAF7P61962 342 aa3.41□□□□□ -1.86
CLK4-207ENST00000520909 VLDLRP98155 873 aa3.41□□□□□ -1.86
CLK4-207ENST00000520909 PPP1R8Q12972 351 aaKnown RBP3.41□□□□□ -1.86
CLK4-207ENST00000520909 EBPQ15125 230 aaKnown RBP3.41□□□□□ -1.86
CLK4-207ENST00000520909 MAPK14Q16539 360 aa3.41□□□□□ -1.86
CLK4-207ENST00000520909 BAK1Q16611 211 aa3.41□□□□□ -1.86
CLK4-207ENST00000520909 DUSP7Q16829 419 aa3.41□□□□□ -1.86
CLK4-207ENST00000520909 LIN52Q52LA3 116 aa3.41□□□□□ -1.86
CLK4-207ENST00000520909 OR2T5Q6IEZ7 315 aa3.41□□□□□ -1.86
CLK4-207ENST00000520909 DHRS4L2Q6PKH6 230 aa3.41□□□□□ -1.86
CLK4-207ENST00000520909 HSDL2Q6YN16 418 aa3.41□□□□□ -1.86
CLK4-207ENST00000520909 FRRS1Q6ZNA5 592 aa3.41□□□□□ -1.86
CLK4-207ENST00000520909 C16orf47Q6ZP98 133 aaPredicted RBP3.41□□□□□ -1.86
CLK4-207ENST00000520909 NDUFAF7Q7L592 441 aa3.41□□□□□ -1.86
CLK4-207ENST00000520909 PIWIL3Q7Z3Z3 882 aaKnown RBP3.41□□□□□ -1.86
CLK4-207ENST00000520909 CYP4Z1Q86W10 505 aa3.41□□□□□ -1.86
CLK4-207ENST00000520909 CARM1Q86X55 608 aa3.41□□□□□ -1.86
CLK4-207ENST00000520909 RBM45Q8IUH3 476 aaKnown RBP3.41□□□□□ -1.86
CLK4-207ENST00000520909 C9orf40Q8IXQ3 194 aa3.41□□□□□ -1.86
CLK4-207ENST00000520909 PRR22Q8IZ63 422 aa3.41□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms