RNA–Protein interactions for RNA: ENST00000520602.5

MCF2-209, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene MCF2, Length 3,945 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-209ENST00000520602 CDK2P24941 298 aa9.17□□□□□ -0.94
MCF2-209ENST00000520602 LCN1P31025 176 aa9.17□□□□□ -0.94
MCF2-209ENST00000520602 SLC25A1P53007 311 aa9.17□□□□□ -0.94
MCF2-209ENST00000520602 EFNB1P98172 346 aa9.17□□□□□ -0.94
MCF2-209ENST00000520602 SLC17A1Q14916 467 aa9.17□□□□□ -0.94
MCF2-209ENST00000520602 CDNFQ49AH0 187 aa9.17□□□□□ -0.94
MCF2-209ENST00000520602 C5orf46Q6UWT4 87 aa9.17□□□□□ -0.94
MCF2-209ENST00000520602 MDGA2Q7Z553 956 aa9.17□□□□□ -0.94
MCF2-209ENST00000520602 UBALD2Q8IYN6 164 aa9.17□□□□□ -0.94
MCF2-209ENST00000520602 LRRC18Q8N456 261 aa9.17□□□□□ -0.94
MCF2-209ENST00000520602 ACBD4Q8NC06 268 aa9.17□□□□□ -0.94
MCF2-209ENST00000520602 PPP1R14AQ96A00 147 aa9.17□□□□□ -0.94
MCF2-209ENST00000520602 MNTQ99583 582 aa9.17□□□□□ -0.94
MCF2-209ENST00000520602 CHST11Q9NPF2 352 aa9.17□□□□□ -0.94
MCF2-209ENST00000520602 UPB1Q9UBR1 384 aa9.17□□□□□ -0.94
MCF2-209ENST00000520602 UNC80Q8N2C7 3258 aa9.17□□□□□ -0.94
MCF2-209ENST00000520602 TEX51A0A1B0GUA7 166 aa9.17□□□□□ -0.94
MCF2-209ENST00000520602 MEGF11A6BM72 1044 aa9.17□□□□□ -0.94
MCF2-209ENST00000520602 FABP7O15540 132 aa9.17□□□□□ -0.94
MCF2-209ENST00000520602 AMY2AP04746 511 aa9.17□□□□□ -0.94
MCF2-209ENST00000520602 TCN2P20062 427 aa9.17□□□□□ -0.94
MCF2-209ENST00000520602 PTBP1P26599 531 aaKnown RBP eCLIP9.17□□□□□ -0.94
MCF2-209ENST00000520602 VEGFCP49767 419 aa9.17□□□□□ -0.94
MCF2-209ENST00000520602 IGLV3-21P80748 117 aaPredicted RBP9.17□□□□□ -0.94
MCF2-209ENST00000520602 CD200R1LQ6Q8B3 271 aa9.17□□□□□ -0.94
MCF2-209ENST00000520602 WDR74Q6RFH5 385 aaPredicted RBP9.17□□□□□ -0.94
MCF2-209ENST00000520602 RPS19BP1Q86WX3 136 aaKnown RBP9.17□□□□□ -0.94
MCF2-209ENST00000520602 ADGRG3Q86Y34 549 aa9.17□□□□□ -0.94
MCF2-209ENST00000520602 ZNF584Q8IVC4 421 aa9.17□□□□□ -0.94
MCF2-209ENST00000520602 OR10AC1Q8NH08 325 aa9.17□□□□□ -0.94
MCF2-209ENST00000520602 OTOSQ8NHW6 89 aa9.17□□□□□ -0.94
MCF2-209ENST00000520602 CASTOR1Q8WTX7 329 aa9.17□□□□□ -0.94
MCF2-209ENST00000520602 ZNRF4Q8WWF5 429 aa9.17□□□□□ -0.94
MCF2-209ENST00000520602 DVL3Q92997 716 aaPredicted RBP9.17□□□□□ -0.94
MCF2-209ENST00000520602 FAM3DQ96BQ1 224 aa9.17□□□□□ -0.94
MCF2-209ENST00000520602 FGGYQ96C11 551 aa9.17□□□□□ -0.94
MCF2-209ENST00000520602 HYLS1Q96M11 299 aa9.17□□□□□ -0.94
MCF2-209ENST00000520602 DUSP15Q9H1R2 295 aaPredicted RBP9.17□□□□□ -0.94
MCF2-209ENST00000520602 C1orf198Q9H425 327 aa9.17□□□□□ -0.94
MCF2-209ENST00000520602 ZNF160Q9HCG1 818 aa9.17□□□□□ -0.94
MCF2-209ENST00000520602 EXOSC3Q9NQT5 275 aaKnown RBP9.17□□□□□ -0.94
MCF2-209ENST00000520602 PLSCR3Q9NRY6 295 aa9.17□□□□□ -0.94
MCF2-209ENST00000520602 NPAP1Q9NZP6 1156 aa9.17□□□□□ -0.94
MCF2-209ENST00000520602 OR52A1Q9UKL2 312 aa9.17□□□□□ -0.94
MCF2-209ENST00000520602 PI4KAP42356 2102 aa9.17□□□□□ -0.94
MCF2-209ENST00000520602 SPTBN2O15020 2390 aa9.17□□□□□ -0.94
MCF2-209ENST00000520602 IGKV1D-42A0A075B6H8 117 aa9.16□□□□□ -0.94
MCF2-209ENST00000520602 CREBL2O60519 120 aaPredicted RBP9.16□□□□□ -0.94
MCF2-209ENST00000520602 LIPCP11150 499 aa9.16□□□□□ -0.94
MCF2-209ENST00000520602 NR2C1P13056 603 aa9.16□□□□□ -0.94
MCF2-209ENST00000520602 APEHP13798 732 aaKnown RBP9.16□□□□□ -0.94
MCF2-209ENST00000520602 PSMB1P20618 241 aaKnown RBP9.16□□□□□ -0.94
MCF2-209ENST00000520602 GALP22466 123 aa9.16□□□□□ -0.94
MCF2-209ENST00000520602 DDOSTP39656 456 aa9.16□□□□□ -0.94
MCF2-209ENST00000520602 OR3A3P47888 321 aa9.16□□□□□ -0.94
MCF2-209ENST00000520602 OR3A2P47893 321 aa9.16□□□□□ -0.94
MCF2-209ENST00000520602 GAS1P54826 345 aa9.16□□□□□ -0.94
MCF2-209ENST00000520602 GPR85P60893 370 aa9.16□□□□□ -0.94
MCF2-209ENST00000520602 ZNF362Q5T0B9 420 aaPredicted RBP9.16□□□□□ -0.94
MCF2-209ENST00000520602 AWAT2Q6E213 333 aa9.16□□□□□ -0.94
MCF2-209ENST00000520602 OR10K2Q6IF99 312 aa9.16□□□□□ -0.94
MCF2-209ENST00000520602 HDDC2Q7Z4H3 204 aa9.16□□□□□ -0.94
MCF2-209ENST00000520602 MCEMP1Q8IX19 187 aa9.16□□□□□ -0.94
MCF2-209ENST00000520602 ARMC10Q8N2F6 343 aa9.16□□□□□ -0.94
MCF2-209ENST00000520602 PNLDC1Q8NA58 520 aaKnown RBP9.16□□□□□ -0.94
MCF2-209ENST00000520602 OR6F1Q8NGZ6 308 aa9.16□□□□□ -0.94
MCF2-209ENST00000520602 ST8SIA1Q92185 356 aa9.16□□□□□ -0.94
MCF2-209ENST00000520602 SFXN2Q96NB2 322 aa9.16□□□□□ -0.94
MCF2-209ENST00000520602 MESP1Q9BRJ9 268 aa9.16□□□□□ -0.94
MCF2-209ENST00000520602 FLVCR2Q9UPI3 526 aa9.16□□□□□ -0.94
MCF2-209ENST00000520602 KLHDC2Q9Y2U9 406 aa9.16□□□□□ -0.94
MCF2-209ENST00000520602 NPIPB9F8W1W9 429 aa9.16□□□□□ -0.94
MCF2-209ENST00000520602 OGG1O15527 345 aa9.16□□□□□ -0.94
MCF2-209ENST00000520602 LANCL1O43813 399 aa9.16□□□□□ -0.94
MCF2-209ENST00000520602 LDOC1O95751 146 aaPredicted RBP9.16□□□□□ -0.94
MCF2-209ENST00000520602 PDGFBP01127 241 aaPredicted RBP9.16□□□□□ -0.94
MCF2-209ENST00000520602 CSNK1A1P48729 337 aa9.16□□□□□ -0.94
MCF2-209ENST00000520602 GNG2P59768 71 aa9.16□□□□□ -0.94
MCF2-209ENST00000520602 NANOS3P60323 173 aaKnown RBP9.16□□□□□ -0.94
MCF2-209ENST00000520602 PLGLB1Q02325 96 aa9.16□□□□□ -0.94
MCF2-209ENST00000520602 IL22RA1Q8N6P7 574 aa9.16□□□□□ -0.94
MCF2-209ENST00000520602 TAS2R4Q9NYW5 299 aa9.16□□□□□ -0.94
MCF2-209ENST00000520602 PADI1Q9ULC6 663 aa9.16□□□□□ -0.94
MCF2-209ENST00000520602 MN1Q10571 1320 aaPredicted RBP9.16□□□□□ -0.94
MCF2-209ENST00000520602 A0A1W2PQ72 361 aa9.16□□□□□ -0.94
MCF2-209ENST00000520602 MPIG6BO95866 241 aa9.16□□□□□ -0.94
MCF2-209ENST00000520602 CCL4P13236 92 aa9.16□□□□□ -0.94
MCF2-209ENST00000520602 HLA-DOBP13765 273 aa9.16□□□□□ -0.94
MCF2-209ENST00000520602 ALOX5APP20292 161 aa9.16□□□□□ -0.94
MCF2-209ENST00000520602 HTR2CP28335 458 aa9.16□□□□□ -0.94
MCF2-209ENST00000520602 GALNSP34059 522 aa9.16□□□□□ -0.94
MCF2-209ENST00000520602 SSR4P51571 173 aa9.16□□□□□ -0.94
MCF2-209ENST00000520602 STARD6P59095 220 aa9.16□□□□□ -0.94
MCF2-209ENST00000520602 LRRC37A5PQ49AS3 106 aa9.16□□□□□ -0.94
MCF2-209ENST00000520602 WDR38Q5JTN6 314 aa9.16□□□□□ -0.94
MCF2-209ENST00000520602 OR1J4Q8NGS1 313 aa9.16□□□□□ -0.94
MCF2-209ENST00000520602 OR56B4Q8NH76 319 aa9.16□□□□□ -0.94
MCF2-209ENST00000520602 ADIPOR1Q96A54 375 aa9.16□□□□□ -0.94
MCF2-209ENST00000520602 RNF170Q96K19 258 aa9.16□□□□□ -0.94
MCF2-209ENST00000520602 NAA11Q9BSU3 229 aaPredicted RBP9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms