RNA–Protein interactions for RNA: ENST00000519474.5

HDAC3-215, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 736 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-215ENST00000519474 NUDT2P50583 147 aa8.07□□□□□ -1.12
HDAC3-215ENST00000519474 TAGLNQ01995 201 aaKnown RBP8.07□□□□□ -1.12
HDAC3-215ENST00000519474 DAG1Q14118 895 aa8.07□□□□□ -1.12
HDAC3-215ENST00000519474 RAB39AQ14964 217 aa8.07□□□□□ -1.12
HDAC3-215ENST00000519474 TRAM2Q15035 370 aa8.07□□□□□ -1.12
HDAC3-215ENST00000519474 IQCCQ4KMZ1 466 aa8.07□□□□□ -1.12
HDAC3-215ENST00000519474 IFI44LQ53G44 452 aa8.07□□□□□ -1.12
HDAC3-215ENST00000519474 KRBOX4Q5JUW0 171 aa8.07□□□□□ -1.12
HDAC3-215ENST00000519474 SLC25A47Q6Q0C1 308 aa8.07□□□□□ -1.12
HDAC3-215ENST00000519474 FKBP9P1Q75LS8 142 aa8.07□□□□□ -1.12
HDAC3-215ENST00000519474 CPLX4Q7Z7G2 160 aa8.07□□□□□ -1.12
HDAC3-215ENST00000519474 ZNF584Q8IVC4 421 aa8.07□□□□□ -1.12
HDAC3-215ENST00000519474 RNF113BQ8IZP6 322 aaKnown RBP8.07□□□□□ -1.12
HDAC3-215ENST00000519474 ZCCHC24Q8N2G6 241 aaKnown RBP8.07□□□□□ -1.12
HDAC3-215ENST00000519474 SYT14Q8NB59 555 aa8.07□□□□□ -1.12
HDAC3-215ENST00000519474 C10orf105Q8TEF2 133 aa8.07□□□□□ -1.12
HDAC3-215ENST00000519474 ASB10Q8WXI3 467 aa8.07□□□□□ -1.12
HDAC3-215ENST00000519474 HDAC2Q92769 488 aaKnown RBP8.07□□□□□ -1.12
HDAC3-215ENST00000519474 BPIFA2Q96DR5 249 aa8.07□□□□□ -1.12
HDAC3-215ENST00000519474 MED30Q96HR3 178 aa8.07□□□□□ -1.12
HDAC3-215ENST00000519474 C7orf34Q96L11 122 aa8.07□□□□□ -1.12
HDAC3-215ENST00000519474 CEP19Q96LK0 163 aa8.07□□□□□ -1.12
HDAC3-215ENST00000519474 SORCS2Q96PQ0 1159 aa8.07□□□□□ -1.12
HDAC3-215ENST00000519474 VRK1Q99986 396 aaPredicted RBP8.07□□□□□ -1.12
HDAC3-215ENST00000519474 FNDC11Q9BVV2 318 aa8.07□□□□□ -1.12
HDAC3-215ENST00000519474 TXNIPQ9H3M7 391 aa8.07□□□□□ -1.12
HDAC3-215ENST00000519474 TBCCD1Q9NVR7 557 aa8.07□□□□□ -1.12
HDAC3-215ENST00000519474 TMEM38BQ9NVV0 291 aa8.07□□□□□ -1.12
HDAC3-215ENST00000519474 EGFL7Q9UHF1 273 aa8.07□□□□□ -1.12
HDAC3-215ENST00000519474 ADAM21Q9UKJ8 722 aa8.07□□□□□ -1.12
HDAC3-215ENST00000519474 YLPM1P49750 1951 aaKnown RBP8.07□□□□□ -1.12
HDAC3-215ENST00000519474 RTTNQ86VV8 2226 aa8.07□□□□□ -1.12
HDAC3-215ENST00000519474 C2CD3Q4AC94 2353 aa8.06□□□□□ -1.12
HDAC3-215ENST00000519474 CSPG4Q6UVK1 2322 aa8.06□□□□□ -1.12
HDAC3-215ENST00000519474 TRAV6A0A075B6T7 132 aa8.06□□□□□ -1.12
HDAC3-215ENST00000519474 A0A1W2PRG6 482 aa8.06□□□□□ -1.12
HDAC3-215ENST00000519474 SH3PXD2BA1X283 911 aa8.06□□□□□ -1.12
HDAC3-215ENST00000519474 CENPBD1B2RD01 187 aa8.06□□□□□ -1.12
HDAC3-215ENST00000519474 VWC2LB2RUY7 222 aa8.06□□□□□ -1.12
HDAC3-215ENST00000519474 INAFM1C9JVW0 142 aa8.06□□□□□ -1.12
HDAC3-215ENST00000519474 hCG_2039718K7EN88 272 aa8.06□□□□□ -1.12
HDAC3-215ENST00000519474 EBAG9O00559 213 aa8.06□□□□□ -1.12
HDAC3-215ENST00000519474 MGRN1O60291 552 aa8.06□□□□□ -1.12
HDAC3-215ENST00000519474 PTP4A3O75365 173 aa8.06□□□□□ -1.12
HDAC3-215ENST00000519474 IGHG1P01857 330 aa8.06□□□□□ -1.12
HDAC3-215ENST00000519474 IFNW1P05000 195 aa8.06□□□□□ -1.12
HDAC3-215ENST00000519474 ATP6V1B1P15313 513 aa8.06□□□□□ -1.12
HDAC3-215ENST00000519474 PCSK6P29122 969 aa8.06□□□□□ -1.12
HDAC3-215ENST00000519474 IFNA8P32881 189 aa8.06□□□□□ -1.12
HDAC3-215ENST00000519474 PTDSS1P48651 473 aaKnown RBP8.06□□□□□ -1.12
HDAC3-215ENST00000519474 CLRN1P58418 232 aa8.06□□□□□ -1.12
HDAC3-215ENST00000519474 CTXN1P60606 82 aa8.06□□□□□ -1.12
HDAC3-215ENST00000519474 LOXL1Q08397 574 aaPredicted RBP8.06□□□□□ -1.12
HDAC3-215ENST00000519474 ANKDD1AQ495B1 522 aa8.06□□□□□ -1.12
HDAC3-215ENST00000519474 KRT80Q6KB66 452 aa8.06□□□□□ -1.12
HDAC3-215ENST00000519474 CLEC2AQ6UVW9 174 aa8.06□□□□□ -1.12
HDAC3-215ENST00000519474 ZER1Q7Z7L7 766 aa8.06□□□□□ -1.12
HDAC3-215ENST00000519474 NRMQ8IXM6 262 aa8.06□□□□□ -1.12
HDAC3-215ENST00000519474 OFCC1Q8IZS5 231 aa8.06□□□□□ -1.12
HDAC3-215ENST00000519474 OR4K5Q8NGD3 323 aa8.06□□□□□ -1.12
HDAC3-215ENST00000519474 OR51A7Q8NH64 312 aa8.06□□□□□ -1.12
HDAC3-215ENST00000519474 FAM168AQ92567 244 aa8.06□□□□□ -1.12
HDAC3-215ENST00000519474 FOXN4Q96NZ1 517 aa8.06□□□□□ -1.12
HDAC3-215ENST00000519474 KCNK17Q96T54 332 aa8.06□□□□□ -1.12
HDAC3-215ENST00000519474 KCTD14Q9BQ13 255 aaPredicted RBP8.06□□□□□ -1.12
HDAC3-215ENST00000519474 NMNAT1Q9HAN9 279 aaPredicted RBP8.06□□□□□ -1.12
HDAC3-215ENST00000519474 DCAF13Q9NV06 445 aaKnown RBP8.06□□□□□ -1.12
HDAC3-215ENST00000519474 ARL8BQ9NVJ2 186 aa8.06□□□□□ -1.12
HDAC3-215ENST00000519474 KIF17Q9P2E2 1029 aa8.06□□□□□ -1.12
HDAC3-215ENST00000519474 CD300AQ9UGN4 299 aa8.06□□□□□ -1.12
HDAC3-215ENST00000519474 HIF3AQ9Y2N7 669 aa8.06□□□□□ -1.12
HDAC3-215ENST00000519474 ENPP4Q9Y6X5 453 aa8.06□□□□□ -1.12
HDAC3-215ENST00000519474 CR1P17927 2039 aa8.05□□□□□ -1.12
HDAC3-215ENST00000519474 VPS13CQ709C8 3753 aa8.05□□□□□ -1.12
HDAC3-215ENST00000519474 LOC105371267A0A1B0GV96 52 aa8.05□□□□□ -1.12
HDAC3-215ENST00000519474 NPIPB13A6NJU9 1138 aa8.05□□□□□ -1.12
HDAC3-215ENST00000519474 POM121CA8CG34 1229 aa8.05□□□□□ -1.12
HDAC3-215ENST00000519474 NPIPB4C9JG80 1138 aa8.05□□□□□ -1.12
HDAC3-215ENST00000519474 CDC42EP2O14613 210 aa8.05□□□□□ -1.12
HDAC3-215ENST00000519474 CD5LO43866 347 aa8.05□□□□□ -1.12
HDAC3-215ENST00000519474 UBL3O95164 117 aa8.05□□□□□ -1.12
HDAC3-215ENST00000519474 ZNF26P17031 533 aaPredicted RBP8.05□□□□□ -1.12
HDAC3-215ENST00000519474 CDAP32320 146 aa8.05□□□□□ -1.12
HDAC3-215ENST00000519474 MSX2P35548 267 aaPredicted RBP8.05□□□□□ -1.12
HDAC3-215ENST00000519474 GLRXP35754 106 aa8.05□□□□□ -1.12
HDAC3-215ENST00000519474 CBX5P45973 191 aa8.05□□□□□ -1.12
HDAC3-215ENST00000519474 EVX1P49640 407 aa8.05□□□□□ -1.12
HDAC3-215ENST00000519474 RPL27P61353 136 aaKnown RBP8.05□□□□□ -1.12
HDAC3-215ENST00000519474 GNGT1P63211 74 aa8.05□□□□□ -1.12
HDAC3-215ENST00000519474 NRN1LQ496H8 165 aa8.05□□□□□ -1.12
HDAC3-215ENST00000519474 ALG10Q5BKT4 473 aa8.05□□□□□ -1.12
HDAC3-215ENST00000519474 C10orf128Q5T292 105 aa8.05□□□□□ -1.12
HDAC3-215ENST00000519474 GKAP1Q5VSY0 366 aaPredicted RBP8.05□□□□□ -1.12
HDAC3-215ENST00000519474 PODNL1Q6PEZ8 512 aa8.05□□□□□ -1.12
HDAC3-215ENST00000519474 TMPRSS11FQ6ZWK6 438 aa8.05□□□□□ -1.12
HDAC3-215ENST00000519474 MBOAT2Q6ZWT7 520 aa8.05□□□□□ -1.12
HDAC3-215ENST00000519474 ZNF554Q86TJ5 538 aa8.05□□□□□ -1.12
HDAC3-215ENST00000519474 OAFQ86UD1 273 aa8.05□□□□□ -1.12
HDAC3-215ENST00000519474 LRP11Q86VZ4 500 aa8.05□□□□□ -1.12
HDAC3-215ENST00000519474 PRIMA1Q86XR5 153 aa8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms