RNA–Protein interactions for RNA: ENST00000518385.5

SDC2-202, Transcript of syndecan 2, humanhuman

TSL 5 BASIC

Gene SDC2, Length 1,583 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-202ENST00000518385 PPP1R3BQ86XI6 285 aa16.55■□□□□ 0.24
SDC2-202ENST00000518385 ZNF441Q8N8Z8 693 aa16.55■□□□□ 0.24
SDC2-202ENST00000518385 PNPLA2Q96AD5 504 aa16.55■□□□□ 0.24
SDC2-202ENST00000518385 ELMOD3Q96FG2 381 aa16.55■□□□□ 0.24
SDC2-202ENST00000518385 DNTTIP1Q9H147 329 aa16.55■□□□□ 0.24
SDC2-202ENST00000518385 LDAHQ9H6V9 325 aa16.55■□□□□ 0.24
SDC2-202ENST00000518385 PPIEQ9UNP9 301 aaKnown RBP16.55■□□□□ 0.24
SDC2-202ENST00000518385 FOXJ3Q9UPW0 622 aa16.55■□□□□ 0.24
SDC2-202ENST00000518385 SLC6A5Q9Y345 797 aa16.55■□□□□ 0.24
SDC2-202ENST00000518385 OTOGLQ3ZCN5 2332 aa16.55■□□□□ 0.24
SDC2-202ENST00000518385 CIB4A0PJX0 185 aa16.55■□□□□ 0.24
SDC2-202ENST00000518385 ZC3H12DA2A288 527 aaKnown RBP16.55■□□□□ 0.24
SDC2-202ENST00000518385 TRIM77I1YAP6 450 aa16.55■□□□□ 0.24
SDC2-202ENST00000518385 AGRPO00253 132 aa16.55■□□□□ 0.24
SDC2-202ENST00000518385 ARPC1BO15143 372 aaKnown RBP16.55■□□□□ 0.24
SDC2-202ENST00000518385 TSPAN2O60636 221 aa16.55■□□□□ 0.24
SDC2-202ENST00000518385 CFDP00746 253 aaPredicted RBP16.55■□□□□ 0.24
SDC2-202ENST00000518385 SEC61A1P61619 476 aaKnown RBP16.55■□□□□ 0.24
SDC2-202ENST00000518385 TOMM20Q15388 145 aa16.55■□□□□ 0.24
SDC2-202ENST00000518385 C9orf40Q8IXQ3 194 aa16.55■□□□□ 0.24
SDC2-202ENST00000518385 ESX1Q8N693 406 aa16.55■□□□□ 0.24
SDC2-202ENST00000518385 BMPERQ8N8U9 685 aa16.55■□□□□ 0.24
SDC2-202ENST00000518385 OR52I2Q8NH67 350 aa16.55■□□□□ 0.24
SDC2-202ENST00000518385 MOSPD2Q8NHP6 518 aa16.55■□□□□ 0.24
SDC2-202ENST00000518385 PHOSPHO1Q8TCT1 267 aa16.55■□□□□ 0.24
SDC2-202ENST00000518385 LIPHQ8WWY8 451 aa16.55■□□□□ 0.24
SDC2-202ENST00000518385 C3orf49Q96BT1 292 aa16.55■□□□□ 0.24
SDC2-202ENST00000518385 SEMA4CQ9C0C4 833 aa16.55■□□□□ 0.24
SDC2-202ENST00000518385 SLC26A1Q9H2B4 701 aa16.55■□□□□ 0.24
SDC2-202ENST00000518385 MOKQ9UQ07 419 aa16.55■□□□□ 0.24
SDC2-202ENST00000518385 AK6Q9Y3D8 172 aaKnown RBP16.55■□□□□ 0.24
SDC2-202ENST00000518385 KCNMB2Q9Y691 235 aa16.55■□□□□ 0.24
SDC2-202ENST00000518385 SEC16AO15027 2179 aa16.54■□□□□ 0.24
SDC2-202ENST00000518385 A0A1B0GVC2 190 aa16.54■□□□□ 0.24
SDC2-202ENST00000518385 A6NIN4 97 aa16.54■□□□□ 0.24
SDC2-202ENST00000518385 VSTM2BA6NLU5 285 aa16.54■□□□□ 0.24
SDC2-202ENST00000518385 ALG1L2C9J202 215 aa16.54■□□□□ 0.24
SDC2-202ENST00000518385 GDF9O60383 454 aa16.54■□□□□ 0.24
SDC2-202ENST00000518385 TIAF1O95411 115 aa16.54■□□□□ 0.24
SDC2-202ENST00000518385 ALDOBP05062 364 aa16.54■□□□□ 0.24
SDC2-202ENST00000518385 HEXBP07686 556 aa16.54■□□□□ 0.24
SDC2-202ENST00000518385 CSF1P09603 554 aa16.54■□□□□ 0.24
SDC2-202ENST00000518385 PTH2RP49190 550 aa16.54■□□□□ 0.24
SDC2-202ENST00000518385 EFNA3P52797 238 aa16.54■□□□□ 0.24
SDC2-202ENST00000518385 MC2RQ01718 297 aa16.54■□□□□ 0.24
SDC2-202ENST00000518385 RBMS2Q15434 407 aaKnown RBP16.54■□□□□ 0.24
SDC2-202ENST00000518385 NDUFAF6Q330K2 333 aa16.54■□□□□ 0.24
SDC2-202ENST00000518385 TP53I3Q53FA7 332 aa16.54■□□□□ 0.24
SDC2-202ENST00000518385 TMEM69Q5SWH9 247 aa16.54■□□□□ 0.24
SDC2-202ENST00000518385 ARSKQ6UWY0 536 aa16.54■□□□□ 0.24
SDC2-202ENST00000518385 APOOLQ6UXV4 268 aa16.54■□□□□ 0.24
SDC2-202ENST00000518385 TFAP2EQ6VUC0 442 aa16.54■□□□□ 0.24
SDC2-202ENST00000518385 PIP4P1Q86T03 277 aa16.54■□□□□ 0.24
SDC2-202ENST00000518385 BEST4Q8NFU0 473 aa16.54■□□□□ 0.24
SDC2-202ENST00000518385 SMAP2Q8WU79 429 aaPredicted RBP16.54■□□□□ 0.24
SDC2-202ENST00000518385 METTL21AQ8WXB1 218 aa16.54■□□□□ 0.24
SDC2-202ENST00000518385 SLC25A38Q96DW6 304 aa16.54■□□□□ 0.24
SDC2-202ENST00000518385 GAL3ST4Q96RP7 486 aa16.54■□□□□ 0.24
SDC2-202ENST00000518385 ENKD1Q9H0I2 346 aa16.54■□□□□ 0.24
SDC2-202ENST00000518385 ALX4Q9H161 411 aaPredicted RBP16.54■□□□□ 0.24
SDC2-202ENST00000518385 AUNIPQ9H7T9 357 aa16.54■□□□□ 0.24
SDC2-202ENST00000518385 MCCC2Q9HCC0 563 aa16.54■□□□□ 0.24
SDC2-202ENST00000518385 CTSFQ9UBX1 484 aa16.54■□□□□ 0.24
SDC2-202ENST00000518385 COL27A1Q8IZC6 1860 aaPredicted RBP16.53■□□□□ 0.24
SDC2-202ENST00000518385 ELOA3DA6NLF2 546 aaPredicted RBP16.53■□□□□ 0.24
SDC2-202ENST00000518385 GMDSO60547 372 aa16.53■□□□□ 0.24
SDC2-202ENST00000518385 MELTFP08582 738 aa16.53■□□□□ 0.24
SDC2-202ENST00000518385 FGF2P09038 288 aa16.53■□□□□ 0.24
SDC2-202ENST00000518385 APEHP13798 732 aaKnown RBP16.53■□□□□ 0.24
SDC2-202ENST00000518385 NR0B1P51843 470 aaKnown RBP16.53■□□□□ 0.24
SDC2-202ENST00000518385 PLCXD2Q0VAA5 305 aa16.53■□□□□ 0.24
SDC2-202ENST00000518385 GK2Q14410 553 aaPredicted RBP16.53■□□□□ 0.24
SDC2-202ENST00000518385 ELOA3BQ3SY89 546 aa16.53■□□□□ 0.24
SDC2-202ENST00000518385 ZNF385CQ66K41 422 aaPredicted RBP16.53■□□□□ 0.24
SDC2-202ENST00000518385 SFRP4Q6FHJ7 346 aaPredicted RBP16.53■□□□□ 0.24
SDC2-202ENST00000518385 SLC25A25Q6KCM7 469 aa16.53■□□□□ 0.24
SDC2-202ENST00000518385 Q6ZTK2 550 aa16.53■□□□□ 0.24
SDC2-202ENST00000518385 KRT77Q7Z794 578 aa16.53■□□□□ 0.24
SDC2-202ENST00000518385 SLC38A9Q8NBW4 561 aa16.53■□□□□ 0.24
SDC2-202ENST00000518385 ELOA3Q8NG57 546 aa16.53■□□□□ 0.24
SDC2-202ENST00000518385 DERL3Q96Q80 235 aa16.53■□□□□ 0.24
SDC2-202ENST00000518385 OR14A2Q96R54 314 aa16.53■□□□□ 0.24
SDC2-202ENST00000518385 TNFRSF13CQ96RJ3 184 aa16.53■□□□□ 0.24
SDC2-202ENST00000518385 GPX7Q96SL4 187 aaPredicted RBP16.53■□□□□ 0.24
SDC2-202ENST00000518385 ADOQ96SZ5 270 aa16.53■□□□□ 0.24
SDC2-202ENST00000518385 OR10A4Q9H209 315 aa16.53■□□□□ 0.24
SDC2-202ENST00000518385 APMAPQ9HDC9 416 aa16.53■□□□□ 0.24
SDC2-202ENST00000518385 NOX4Q9NPH5 578 aa16.53■□□□□ 0.24
SDC2-202ENST00000518385 SLC17A5Q9NRA2 495 aa16.53■□□□□ 0.24
SDC2-202ENST00000518385 ZNF337Q9Y3M9 751 aa16.53■□□□□ 0.24
SDC2-202ENST00000518385 PCDHGA1Q9Y5H4 931 aa16.53■□□□□ 0.24
SDC2-202ENST00000518385 TTLL8A6PVC2 850 aa16.52■□□□□ 0.24
SDC2-202ENST00000518385 IDSB3KWA1 339 aa16.52■□□□□ 0.24
SDC2-202ENST00000518385 IMPA2O14732 288 aa16.52■□□□□ 0.24
SDC2-202ENST00000518385 ALOX12BO75342 701 aa16.52■□□□□ 0.24
SDC2-202ENST00000518385 NMBP08949 121 aa16.52■□□□□ 0.24
SDC2-202ENST00000518385 CXCL2P19875 107 aa16.52■□□□□ 0.24
SDC2-202ENST00000518385 P2RX1P51575 399 aa16.52■□□□□ 0.24
SDC2-202ENST00000518385 SLC25A1P53007 311 aa16.52■□□□□ 0.24
SDC2-202ENST00000518385 PRPS1P60891 318 aa16.52■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms