RNA–Protein interactions for RNA: ENST00000516672.1

SCARNA13-201, small Cajal body-specific RNA 13, humanhuman

BASIC

Gene SCARNA13, Length 275 nt, Biotype scaRNA, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA13-201ENST00000516672 KRT75O95678 551 aa2.64□□□□□ -1.99
SCARNA13-201ENST00000516672 IL33O95760 270 aa2.64□□□□□ -1.99
SCARNA13-201ENST00000516672 THY1P04216 161 aa2.64□□□□□ -1.99
SCARNA13-201ENST00000516672 P04436 131 aa2.64□□□□□ -1.99
SCARNA13-201ENST00000516672 HMGN2P05204 90 aaKnown RBP2.64□□□□□ -1.99
SCARNA13-201ENST00000516672 MELTFP08582 738 aa2.64□□□□□ -1.99
SCARNA13-201ENST00000516672 CT62P0C5K7 136 aa2.64□□□□□ -1.99
SCARNA13-201ENST00000516672 CT45A8P0DMV1 189 aa2.64□□□□□ -1.99
SCARNA13-201ENST00000516672 CT45A9P0DMV2 189 aa2.64□□□□□ -1.99
SCARNA13-201ENST00000516672 IGHV4-38-2P0DP08 117 aa2.64□□□□□ -1.99
SCARNA13-201ENST00000516672 LYNX1P0DP58 116 aa2.64□□□□□ -1.99
SCARNA13-201ENST00000516672 THRBP10828 461 aa2.64□□□□□ -1.99
SCARNA13-201ENST00000516672 FCGR1AP12314 374 aa2.64□□□□□ -1.99
SCARNA13-201ENST00000516672 PRKCAP17252 672 aa2.64□□□□□ -1.99
SCARNA13-201ENST00000516672 NAT1P18440 290 aa2.64□□□□□ -1.99
SCARNA13-201ENST00000516672 UQCRC2P22695 453 aa2.64□□□□□ -1.99
SCARNA13-201ENST00000516672 NR4A1P22736 598 aa2.64□□□□□ -1.99
SCARNA13-201ENST00000516672 PPIBP23284 216 aaKnown RBP2.64□□□□□ -1.99
SCARNA13-201ENST00000516672 PSMA4P25789 261 aaKnown RBP2.64□□□□□ -1.99
SCARNA13-201ENST00000516672 FKBP2P26885 142 aaKnown RBP2.64□□□□□ -1.99
SCARNA13-201ENST00000516672 GDF1P27539 372 aa2.64□□□□□ -1.99
SCARNA13-201ENST00000516672 S100A3P33764 101 aa2.64□□□□□ -1.99
SCARNA13-201ENST00000516672 KRT20P35900 424 aa2.64□□□□□ -1.99
SCARNA13-201ENST00000516672 SOX3P41225 446 aa2.64□□□□□ -1.99
SCARNA13-201ENST00000516672 SLC6A9P48067 706 aa2.64□□□□□ -1.99
SCARNA13-201ENST00000516672 MTNR1BP49286 362 aa2.64□□□□□ -1.99
SCARNA13-201ENST00000516672 CCT3P49368 545 aaKnown RBP2.64□□□□□ -1.99
SCARNA13-201ENST00000516672 PRIM2P49643 509 aa2.64□□□□□ -1.99
SCARNA13-201ENST00000516672 CLK3P49761 638 aaKnown RBP2.64□□□□□ -1.99
SCARNA13-201ENST00000516672 ALDH3A2P51648 485 aa2.64□□□□□ -1.99
SCARNA13-201ENST00000516672 POLR2JP52435 117 aaKnown RBP2.64□□□□□ -1.99
SCARNA13-201ENST00000516672 MAP2K6P52564 334 aa2.64□□□□□ -1.99
SCARNA13-201ENST00000516672 NKX2-5P52952 324 aaPredicted RBP2.64□□□□□ -1.99
SCARNA13-201ENST00000516672 TPTEP56180 551 aa2.64□□□□□ -1.99
SCARNA13-201ENST00000516672 EEFSECP57772 596 aaKnown RBP2.64□□□□□ -1.99
SCARNA13-201ENST00000516672 HBA1P69905 142 aa2.64□□□□□ -1.99
SCARNA13-201ENST00000516672 PSG6Q00889 435 aa2.64□□□□□ -1.99
SCARNA13-201ENST00000516672 ID2Q02363 134 aa2.64□□□□□ -1.99
SCARNA13-201ENST00000516672 PIGFQ07326 219 aa2.64□□□□□ -1.99
SCARNA13-201ENST00000516672 CD47Q08722 323 aa2.64□□□□□ -1.99
SCARNA13-201ENST00000516672 ITGADQ13349 1161 aa2.64□□□□□ -1.99
SCARNA13-201ENST00000516672 SELPLGQ14242 412 aa2.64□□□□□ -1.99
SCARNA13-201ENST00000516672 DECR1Q16698 335 aa2.64□□□□□ -1.99
SCARNA13-201ENST00000516672 PRSS53Q2L4Q9 553 aa2.64□□□□□ -1.99
SCARNA13-201ENST00000516672 PGS1Q32NB8 556 aa2.64□□□□□ -1.99
SCARNA13-201ENST00000516672 GLYR1Q49A26 553 aaPredicted RBP2.64□□□□□ -1.99
SCARNA13-201ENST00000516672 CT45A2Q5DJT8 189 aa2.64□□□□□ -1.99
SCARNA13-201ENST00000516672 ZNF311Q5JNZ3 666 aa2.64□□□□□ -1.99
SCARNA13-201ENST00000516672 RBM48Q5RL73 367 aaKnown RBP2.64□□□□□ -1.99
SCARNA13-201ENST00000516672 C6orf141Q5SZD1 244 aa2.64□□□□□ -1.99
SCARNA13-201ENST00000516672 LRIF1Q5T3J3 769 aa2.64□□□□□ -1.99
SCARNA13-201ENST00000516672 ZNF691Q5VV52 312 aa2.64□□□□□ -1.99
SCARNA13-201ENST00000516672 PRAMEF8Q5VWM4 474 aa2.64□□□□□ -1.99
SCARNA13-201ENST00000516672 PRAMEF7Q5VXH5 474 aa2.64□□□□□ -1.99
SCARNA13-201ENST00000516672 RNLSQ5VYX0 342 aa2.64□□□□□ -1.99
SCARNA13-201ENST00000516672 TMEM236Q5W0B7 351 aa2.64□□□□□ -1.99
SCARNA13-201ENST00000516672 NXNQ6DKJ4 435 aa2.64□□□□□ -1.99
SCARNA13-201ENST00000516672 DHRS7BQ6IAN0 325 aaPredicted RBP2.64□□□□□ -1.99
SCARNA13-201ENST00000516672 MFSD12Q6NUT3 480 aa2.64□□□□□ -1.99
SCARNA13-201ENST00000516672 CDC73Q6P1J9 531 aa2.64□□□□□ -1.99
SCARNA13-201ENST00000516672 KCTD18Q6PI47 426 aaPredicted RBP2.64□□□□□ -1.99
SCARNA13-201ENST00000516672 CEMP1Q6PRD7 247 aaPredicted RBP2.64□□□□□ -1.99
SCARNA13-201ENST00000516672 TMEM107Q6UX40 140 aa2.64□□□□□ -1.99
SCARNA13-201ENST00000516672 ZNF551Q7Z340 670 aaPredicted RBP2.64□□□□□ -1.99
SCARNA13-201ENST00000516672 THAP5Q7Z6K1 395 aa2.64□□□□□ -1.99
SCARNA13-201ENST00000516672 ARMC8Q8IUR7 673 aa2.64□□□□□ -1.99
SCARNA13-201ENST00000516672 LYSMD2Q8IV50 215 aa2.64□□□□□ -1.99
SCARNA13-201ENST00000516672 CMIPQ8IY22 773 aa2.64□□□□□ -1.99
SCARNA13-201ENST00000516672 DPP10Q8N608 796 aa2.64□□□□□ -1.99
SCARNA13-201ENST00000516672 TMCO5AQ8N6Q1 288 aa2.64□□□□□ -1.99
SCARNA13-201ENST00000516672 BPIFB6Q8NFQ5 453 aa2.64□□□□□ -1.99
SCARNA13-201ENST00000516672 STEAP2Q8NFT2 490 aa2.64□□□□□ -1.99
SCARNA13-201ENST00000516672 OR7A2PQ8NGA2 310 aa2.64□□□□□ -1.99
SCARNA13-201ENST00000516672 OR9A2Q8NGT5 310 aa2.64□□□□□ -1.99
SCARNA13-201ENST00000516672 SPPL2AQ8TCT8 520 aa2.64□□□□□ -1.99
SCARNA13-201ENST00000516672 S100ZQ8WXG8 99 aa2.64□□□□□ -1.99
SCARNA13-201ENST00000516672 HSD17B8Q92506 261 aa2.64□□□□□ -1.99
SCARNA13-201ENST00000516672 GTF2H4Q92759 462 aa2.64□□□□□ -1.99
SCARNA13-201ENST00000516672 DIO2Q92813 273 aa2.64□□□□□ -1.99
SCARNA13-201ENST00000516672 HGDQ93099 445 aa2.64□□□□□ -1.99
SCARNA13-201ENST00000516672 FBXO17Q96EF6 278 aa2.64□□□□□ -1.99
SCARNA13-201ENST00000516672 NEURL3Q96EH8 262 aa2.64□□□□□ -1.99
SCARNA13-201ENST00000516672 FAM120BQ96EK7 910 aaKnown RBP2.64□□□□□ -1.99
SCARNA13-201ENST00000516672 DNAJA3Q96EY1 480 aa2.64□□□□□ -1.99
SCARNA13-201ENST00000516672 GIMAP5Q96F15 307 aa2.64□□□□□ -1.99
SCARNA13-201ENST00000516672 TMEM41AQ96HV5 264 aa2.64□□□□□ -1.99
SCARNA13-201ENST00000516672 RDH12Q96NR8 316 aa2.64□□□□□ -1.99
SCARNA13-201ENST00000516672 MUS81Q96NY9 551 aa2.64□□□□□ -1.99
SCARNA13-201ENST00000516672 MS4A4EQ96PG1 132 aa2.64□□□□□ -1.99
SCARNA13-201ENST00000516672 TRNT1Q96Q11 434 aaKnown RBP2.64□□□□□ -1.99
SCARNA13-201ENST00000516672 OR52E6Q96RD3 313 aa2.64□□□□□ -1.99
SCARNA13-201ENST00000516672 PANX1Q96RD7 426 aa2.64□□□□□ -1.99
SCARNA13-201ENST00000516672 SDHCQ99643 169 aaPredicted RBP2.64□□□□□ -1.99
SCARNA13-201ENST00000516672 SH3GL1Q99961 368 aa2.64□□□□□ -1.99
SCARNA13-201ENST00000516672 ACTRT3Q9BYD9 372 aa2.64□□□□□ -1.99
SCARNA13-201ENST00000516672 TRIM15Q9C019 465 aa2.64□□□□□ -1.99
SCARNA13-201ENST00000516672 GABARAPL1Q9H0R8 117 aa2.64□□□□□ -1.99
SCARNA13-201ENST00000516672 FN3KQ9H479 309 aa2.64□□□□□ -1.99
SCARNA13-201ENST00000516672 EVA1AQ9H8M9 152 aa2.64□□□□□ -1.99
SCARNA13-201ENST00000516672 MTHFD2LQ9H903 347 aaPredicted RBP2.64□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms