RNA–Protein interactions for RNA: ENST00000516665.1

RNU6-539P-201, Transcript of RNA, U6 small nuclear 539, pseudogene, humanhuman

BASIC

Gene RNU6-539P, Length 103 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-539P-201ENST00000516665 TMEM270Q6UE05 265 aa-2.49□□□□□ -2.81
RNU6-539P-201ENST00000516665 AFTPHQ6ULP2 937 aa-2.49□□□□□ -2.81
RNU6-539P-201ENST00000516665 FBXW12Q6X9E4 464 aa-2.49□□□□□ -2.81
RNU6-539P-201ENST00000516665 IQCA1Q86XH1 822 aa-2.49□□□□□ -2.81
RNU6-539P-201ENST00000516665 LRRC17Q8N6Y2 441 aa-2.49□□□□□ -2.81
RNU6-539P-201ENST00000516665 RBPMSQ93062 196 aaKnown RBP-2.49□□□□□ -2.81
RNU6-539P-201ENST00000516665 C7orf26Q96N11 449 aa-2.49□□□□□ -2.81
RNU6-539P-201ENST00000516665 GCNAQ96QF7 691 aa-2.49□□□□□ -2.81
RNU6-539P-201ENST00000516665 ACPTQ9BZG2 426 aa-2.49□□□□□ -2.81
RNU6-539P-201ENST00000516665 POLR3FQ9H1D9 316 aaPredicted RBP-2.49□□□□□ -2.81
RNU6-539P-201ENST00000516665 ZNF385DQ9H6B1 395 aa-2.49□□□□□ -2.81
RNU6-539P-201ENST00000516665 YAE1D1Q9NRH1 226 aa-2.49□□□□□ -2.81
RNU6-539P-201ENST00000516665 TMEM161AQ9NX61 479 aa-2.49□□□□□ -2.81
RNU6-539P-201ENST00000516665 ERVK-18Q9QC07 812 aa-2.49□□□□□ -2.81
RNU6-539P-201ENST00000516665 STAP1Q9ULZ2 295 aa-2.49□□□□□ -2.81
RNU6-539P-201ENST00000516665 BSNQ9UPA5 3926 aa-2.49□□□□□ -2.81
RNU6-539P-201ENST00000516665 ADAMTSL1Q8N6G6 1762 aa-2.49□□□□□ -2.81
RNU6-539P-201ENST00000516665 DISP1Q96F81 1524 aa-2.5□□□□□ -2.81
RNU6-539P-201ENST00000516665 A0A1B0GVG6 124 aa-2.5□□□□□ -2.81
RNU6-539P-201ENST00000516665 PRKYO43930 277 aa-2.5□□□□□ -2.81
RNU6-539P-201ENST00000516665 CDC40O60508 579 aaKnown RBP eCLIP-2.5□□□□□ -2.81
RNU6-539P-201ENST00000516665 PSMD10O75832 226 aa-2.5□□□□□ -2.81
RNU6-539P-201ENST00000516665 ATP5A1P25705 553 aaKnown RBP-2.5□□□□□ -2.81
RNU6-539P-201ENST00000516665 LEPP41159 167 aa-2.5□□□□□ -2.81
RNU6-539P-201ENST00000516665 PRKXP51817 358 aa-2.5□□□□□ -2.81
RNU6-539P-201ENST00000516665 RPS15P62841 145 aaKnown RBP-2.5□□□□□ -2.81
RNU6-539P-201ENST00000516665 PDIA2Q13087 525 aaKnown RBP-2.5□□□□□ -2.81
RNU6-539P-201ENST00000516665 BTN1A1Q13410 526 aa-2.5□□□□□ -2.81
RNU6-539P-201ENST00000516665 ALCAMQ13740 583 aa-2.5□□□□□ -2.81
RNU6-539P-201ENST00000516665 PDK1Q15118 436 aa-2.5□□□□□ -2.81
RNU6-539P-201ENST00000516665 PARP15Q460N3 678 aa-2.5□□□□□ -2.81
RNU6-539P-201ENST00000516665 FBXL19-AS1Q494R0 122 aa-2.5□□□□□ -2.81
RNU6-539P-201ENST00000516665 ACSBG2Q5FVE4 666 aa-2.5□□□□□ -2.81
RNU6-539P-201ENST00000516665 FAM27D1Q5T7N8 215 aa-2.5□□□□□ -2.81
RNU6-539P-201ENST00000516665 RBPMS2Q6ZRY4 209 aaKnown RBP-2.5□□□□□ -2.81
RNU6-539P-201ENST00000516665 SZRD1Q7Z422 152 aa-2.5□□□□□ -2.81
RNU6-539P-201ENST00000516665 ZNF546Q86UE3 836 aa-2.5□□□□□ -2.81
RNU6-539P-201ENST00000516665 COMTD1Q86VU5 262 aa-2.5□□□□□ -2.81
RNU6-539P-201ENST00000516665 Q8N2B8 174 aa-2.5□□□□□ -2.81
RNU6-539P-201ENST00000516665 OR2L13Q8N349 312 aa-2.5□□□□□ -2.81
RNU6-539P-201ENST00000516665 M1APQ8TC57 530 aa-2.5□□□□□ -2.81
RNU6-539P-201ENST00000516665 TMEM37Q8WXS4 190 aa-2.5□□□□□ -2.81
RNU6-539P-201ENST00000516665 CCDC51Q96ER9 411 aa-2.5□□□□□ -2.81
RNU6-539P-201ENST00000516665 PAGE5Q96GU1 130 aa-2.5□□□□□ -2.81
RNU6-539P-201ENST00000516665 ADAT1Q9BUB4 502 aaKnown RBP-2.5□□□□□ -2.81
RNU6-539P-201ENST00000516665 RANBP3Q9H6Z4 567 aaPredicted RBP-2.5□□□□□ -2.81
RNU6-539P-201ENST00000516665 GPN2Q9H9Y4 310 aaPredicted RBP-2.5□□□□□ -2.81
RNU6-539P-201ENST00000516665 EIF2B3Q9NR50 452 aaKnown RBP-2.5□□□□□ -2.81
RNU6-539P-201ENST00000516665 UTP6Q9NYH9 597 aaKnown RBP-2.5□□□□□ -2.81
RNU6-539P-201ENST00000516665 PDP1Q9P0J1 537 aaPredicted RBP-2.5□□□□□ -2.81
RNU6-539P-201ENST00000516665 ORC3Q9UBD5 711 aaPredicted RBP-2.5□□□□□ -2.81
RNU6-539P-201ENST00000516665 GHRLQ9UBU3 117 aa-2.5□□□□□ -2.81
RNU6-539P-201ENST00000516665 SNX7Q9UNH6 387 aa-2.5□□□□□ -2.81
RNU6-539P-201ENST00000516665 ATP6V0A2Q9Y487 856 aa-2.5□□□□□ -2.81
RNU6-539P-201ENST00000516665 MRPS18BQ9Y676 258 aaKnown RBP-2.5□□□□□ -2.81
RNU6-539P-201ENST00000516665 TEP1Q99973 2627 aaKnown RBP-2.5□□□□□ -2.81
RNU6-539P-201ENST00000516665 SVEP1Q4LDE5 3571 aa-2.5□□□□□ -2.81
RNU6-539P-201ENST00000516665 A0A1B0GVL5 298 aa-2.51□□□□□ -2.81
RNU6-539P-201ENST00000516665 hCG_1809904A0A1W2PP81 198 aa-2.51□□□□□ -2.81
RNU6-539P-201ENST00000516665 A0A1W2PPE2 198 aa-2.51□□□□□ -2.81
RNU6-539P-201ENST00000516665 A0A1W2PR64 198 aa-2.51□□□□□ -2.81
RNU6-539P-201ENST00000516665 RAD51DO75771 328 aa-2.51□□□□□ -2.81
RNU6-539P-201ENST00000516665 ERLIN2O94905 339 aa-2.51□□□□□ -2.81
RNU6-539P-201ENST00000516665 CD3DP04234 171 aa-2.51□□□□□ -2.81
RNU6-539P-201ENST00000516665 RAB28P51157 221 aa-2.51□□□□□ -2.81
RNU6-539P-201ENST00000516665 ZRSR2Q15696 482 aaKnown RBP-2.51□□□□□ -2.81
RNU6-539P-201ENST00000516665 MZT2BQ6NZ67 158 aa-2.51□□□□□ -2.81
RNU6-539P-201ENST00000516665 BBS7Q8IWZ6 715 aa-2.51□□□□□ -2.81
RNU6-539P-201ENST00000516665 PI4KAP1Q8N8J0 262 aa-2.51□□□□□ -2.81
RNU6-539P-201ENST00000516665 SYT2Q8N9I0 419 aaPredicted RBP-2.51□□□□□ -2.81
RNU6-539P-201ENST00000516665 MLKLQ8NB16 471 aa-2.51□□□□□ -2.81
RNU6-539P-201ENST00000516665 NEK11Q8NG66 645 aa-2.51□□□□□ -2.81
RNU6-539P-201ENST00000516665 OR4K14Q8NGD5 310 aa-2.51□□□□□ -2.81
RNU6-539P-201ENST00000516665 PATE1Q8WXA2 126 aa-2.51□□□□□ -2.81
RNU6-539P-201ENST00000516665 CLDN23Q96B33 292 aa-2.51□□□□□ -2.81
RNU6-539P-201ENST00000516665 TMIGD2Q96BF3 282 aa-2.51□□□□□ -2.81
RNU6-539P-201ENST00000516665 EVI5LQ96CN4 794 aa-2.51□□□□□ -2.81
RNU6-539P-201ENST00000516665 RAB39BQ96DA2 213 aa-2.51□□□□□ -2.81
RNU6-539P-201ENST00000516665 DEFB118Q96PH6 123 aa-2.51□□□□□ -2.81
RNU6-539P-201ENST00000516665 CALYQ9NYX4 217 aa-2.51□□□□□ -2.81
RNU6-539P-201ENST00000516665 CPAMD8Q8IZJ3 1885 aa-2.52□□□□□ -2.81
RNU6-539P-201ENST00000516665 PIEZO2Q9H5I5 2752 aa-2.52□□□□□ -2.81
RNU6-539P-201ENST00000516665 IZUMO1RA6ND01 250 aa-2.52□□□□□ -2.81
RNU6-539P-201ENST00000516665 ARRDC5A6NEK1 342 aa-2.52□□□□□ -2.81
RNU6-539P-201ENST00000516665 OR6C65A6NJZ3 312 aa-2.52□□□□□ -2.81
RNU6-539P-201ENST00000516665 KBTBD13C9JR72 458 aa-2.52□□□□□ -2.81
RNU6-539P-201ENST00000516665 F8VP50 259 aa-2.52□□□□□ -2.81
RNU6-539P-201ENST00000516665 CACNG3O60359 315 aa-2.52□□□□□ -2.81
RNU6-539P-201ENST00000516665 EIF1BO60739 113 aaKnown RBP-2.52□□□□□ -2.81
RNU6-539P-201ENST00000516665 PTP4A3O75365 173 aa-2.52□□□□□ -2.81
RNU6-539P-201ENST00000516665 NRASP01111 189 aa-2.52□□□□□ -2.81
RNU6-539P-201ENST00000516665 HRASP01112 189 aa-2.52□□□□□ -2.81
RNU6-539P-201ENST00000516665 KRASP01116 189 aa-2.52□□□□□ -2.81
RNU6-539P-201ENST00000516665 OPN1SWP03999 348 aa-2.52□□□□□ -2.81
RNU6-539P-201ENST00000516665 KLK3P07288 261 aaPredicted RBP-2.52□□□□□ -2.81
RNU6-539P-201ENST00000516665 FCARP24071 287 aa-2.52□□□□□ -2.81
RNU6-539P-201ENST00000516665 PEBP1P30086 187 aaKnown RBP-2.52□□□□□ -2.81
RNU6-539P-201ENST00000516665 STIP1P31948 543 aaKnown RBP-2.52□□□□□ -2.81
RNU6-539P-201ENST00000516665 EIF1P41567 113 aaKnown RBP-2.52□□□□□ -2.81
RNU6-539P-201ENST00000516665 OR12D2P58182 307 aa-2.52□□□□□ -2.81
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms