RNA–Protein interactions for RNA: ENST00000516405.1

RNU6-542P-201, Transcript of RNA, U6 small nuclear 542, pseudogene, humanhuman

BASIC

Gene RNU6-542P, Length 103 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-542P-201ENST00000516405 ANAPC2Q9UJX6 822 aa-2.06□□□□□ -2.74
RNU6-542P-201ENST00000516405 HYOU1Q9Y4L1 999 aa-2.06□□□□□ -2.74
RNU6-542P-201ENST00000516405 CAMTA1Q9Y6Y1 1673 aa-2.06□□□□□ -2.74
RNU6-542P-201ENST00000516405 KDM6BO15054 1643 aa-2.06□□□□□ -2.74
RNU6-542P-201ENST00000516405 FASNP49327 2511 aaKnown RBP-2.07□□□□□ -2.74
RNU6-542P-201ENST00000516405 NSG1A0A0A6YYJ2 146 aa-2.07□□□□□ -2.74
RNU6-542P-201ENST00000516405 A0A1B0GVG6 124 aa-2.07□□□□□ -2.74
RNU6-542P-201ENST00000516405 NPIPA7E9PJI5 369 aa-2.07□□□□□ -2.74
RNU6-542P-201ENST00000516405 CACNG3O60359 315 aa-2.07□□□□□ -2.74
RNU6-542P-201ENST00000516405 CDC40O60508 579 aaKnown RBP eCLIP-2.07□□□□□ -2.74
RNU6-542P-201ENST00000516405 PLIN3O60664 434 aa-2.07□□□□□ -2.74
RNU6-542P-201ENST00000516405 STK17BO94768 372 aa-2.07□□□□□ -2.74
RNU6-542P-201ENST00000516405 KCNK2O95069 426 aa-2.07□□□□□ -2.74
RNU6-542P-201ENST00000516405 HSPA4LO95757 839 aa-2.07□□□□□ -2.74
RNU6-542P-201ENST00000516405 IGHV1-46P01743 117 aa-2.07□□□□□ -2.74
RNU6-542P-201ENST00000516405 GAPDHP04406 335 aaKnown RBP-2.07□□□□□ -2.74
RNU6-542P-201ENST00000516405 NPIPA8P0DM63 369 aa-2.07□□□□□ -2.74
RNU6-542P-201ENST00000516405 BCKDHAP12694 445 aa-2.07□□□□□ -2.74
RNU6-542P-201ENST00000516405 CMA1P23946 247 aa-2.07□□□□□ -2.74
RNU6-542P-201ENST00000516405 SPRR2BP35325 72 aa-2.07□□□□□ -2.74
RNU6-542P-201ENST00000516405 ZNF138P52744 262 aa-2.07□□□□□ -2.74
RNU6-542P-201ENST00000516405 GEMP55040 296 aa-2.07□□□□□ -2.74
RNU6-542P-201ENST00000516405 RPS15P62841 145 aaKnown RBP-2.07□□□□□ -2.74
RNU6-542P-201ENST00000516405 PDIA2Q13087 525 aaKnown RBP-2.07□□□□□ -2.74
RNU6-542P-201ENST00000516405 CUL1Q13616 776 aa-2.07□□□□□ -2.74
RNU6-542P-201ENST00000516405 STX1AQ16623 288 aa-2.07□□□□□ -2.74
RNU6-542P-201ENST00000516405 ORMDL2Q53FV1 153 aa-2.07□□□□□ -2.74
RNU6-542P-201ENST00000516405 C1orf141Q5JVX7 400 aa-2.07□□□□□ -2.74
RNU6-542P-201ENST00000516405 CCDC137Q6PK04 289 aaKnown RBP-2.07□□□□□ -2.74
RNU6-542P-201ENST00000516405 TMEM270Q6UE05 265 aa-2.07□□□□□ -2.74
RNU6-542P-201ENST00000516405 FBXW12Q6X9E4 464 aa-2.07□□□□□ -2.74
RNU6-542P-201ENST00000516405 OR2L13Q8N349 312 aa-2.07□□□□□ -2.74
RNU6-542P-201ENST00000516405 VN1R2Q8NFZ6 395 aa-2.07□□□□□ -2.74
RNU6-542P-201ENST00000516405 OR2Z1Q8NG97 314 aa-2.07□□□□□ -2.74
RNU6-542P-201ENST00000516405 RAPGEF5Q92565 580 aa-2.07□□□□□ -2.74
RNU6-542P-201ENST00000516405 CMTM7Q96FZ5 175 aa-2.07□□□□□ -2.74
RNU6-542P-201ENST00000516405 FAHD2AQ96GK7 314 aa-2.07□□□□□ -2.74
RNU6-542P-201ENST00000516405 BAG1Q99933 345 aaPredicted RBP-2.07□□□□□ -2.74
RNU6-542P-201ENST00000516405 ACPTQ9BZG2 426 aa-2.07□□□□□ -2.74
RNU6-542P-201ENST00000516405 GPN2Q9H9Y4 310 aaPredicted RBP-2.07□□□□□ -2.74
RNU6-542P-201ENST00000516405 YAE1D1Q9NRH1 226 aa-2.07□□□□□ -2.74
RNU6-542P-201ENST00000516405 MIOXQ9UGB7 285 aa-2.07□□□□□ -2.74
RNU6-542P-201ENST00000516405 MRPS18BQ9Y676 258 aaKnown RBP-2.07□□□□□ -2.74
RNU6-542P-201ENST00000516405 FKBP7Q9Y680 259 aa-2.07□□□□□ -2.74
RNU6-542P-201ENST00000516405 KNTC1P50748 2209 aa-2.07□□□□□ -2.74
RNU6-542P-201ENST00000516405 FAT2Q9NYQ8 4349 aa-2.08□□□□□ -2.74
RNU6-542P-201ENST00000516405 LOC285556D6RIA3 1793 aa-2.08□□□□□ -2.74
RNU6-542P-201ENST00000516405 TEP1Q99973 2627 aaKnown RBP-2.08□□□□□ -2.74
RNU6-542P-201ENST00000516405 C5orf51A6NDU8 294 aa-2.08□□□□□ -2.74
RNU6-542P-201ENST00000516405 ARRDC5A6NEK1 342 aa-2.08□□□□□ -2.74
RNU6-542P-201ENST00000516405 FAM86B1E9PN63 330 aa-2.08□□□□□ -2.74
RNU6-542P-201ENST00000516405 F8VP50 259 aa-2.08□□□□□ -2.74
RNU6-542P-201ENST00000516405 ERLIN2O94905 339 aa-2.08□□□□□ -2.74
RNU6-542P-201ENST00000516405 OPN1SWP03999 348 aa-2.08□□□□□ -2.74
RNU6-542P-201ENST00000516405 FAM86B2P0C5J1 330 aa-2.08□□□□□ -2.74
RNU6-542P-201ENST00000516405 FCARP24071 287 aa-2.08□□□□□ -2.74
RNU6-542P-201ENST00000516405 ATP5A1P25705 553 aaKnown RBP-2.08□□□□□ -2.74
RNU6-542P-201ENST00000516405 TDO2P48775 406 aa-2.08□□□□□ -2.74
RNU6-542P-201ENST00000516405 DCAF7P61962 342 aa-2.08□□□□□ -2.74
RNU6-542P-201ENST00000516405 HERV-K104P63124 156 aa-2.08□□□□□ -2.74
RNU6-542P-201ENST00000516405 CCNA1P78396 465 aa-2.08□□□□□ -2.74
RNU6-542P-201ENST00000516405 HAUS3Q68CZ6 603 aa-2.08□□□□□ -2.74
RNU6-542P-201ENST00000516405 AFTPHQ6ULP2 937 aa-2.08□□□□□ -2.74
RNU6-542P-201ENST00000516405 IQCA1Q86XH1 822 aa-2.08□□□□□ -2.74
RNU6-542P-201ENST00000516405 LRRC17Q8N6Y2 441 aa-2.08□□□□□ -2.74
RNU6-542P-201ENST00000516405 PATE1Q8WXA2 126 aa-2.08□□□□□ -2.74
RNU6-542P-201ENST00000516405 CLDN23Q96B33 292 aa-2.08□□□□□ -2.74
RNU6-542P-201ENST00000516405 TMIGD2Q96BF3 282 aa-2.08□□□□□ -2.74
RNU6-542P-201ENST00000516405 PAGE5Q96GU1 130 aa-2.08□□□□□ -2.74
RNU6-542P-201ENST00000516405 SLC35G5Q96KT7 338 aa-2.08□□□□□ -2.74
RNU6-542P-201ENST00000516405 C8orf48Q96LL4 319 aa-2.08□□□□□ -2.74
RNU6-542P-201ENST00000516405 UBE2E2Q96LR5 201 aa-2.08□□□□□ -2.74
RNU6-542P-201ENST00000516405 RMDN2Q96LZ7 410 aa-2.08□□□□□ -2.74
RNU6-542P-201ENST00000516405 GPA33Q99795 319 aa-2.08□□□□□ -2.74
RNU6-542P-201ENST00000516405 TEX12Q9BXU0 123 aa-2.08□□□□□ -2.74
RNU6-542P-201ENST00000516405 POLR3FQ9H1D9 316 aaPredicted RBP-2.08□□□□□ -2.74
RNU6-542P-201ENST00000516405 NEUROG2Q9H2A3 272 aa-2.08□□□□□ -2.74
RNU6-542P-201ENST00000516405 ZNF385DQ9H6B1 395 aa-2.08□□□□□ -2.74
RNU6-542P-201ENST00000516405 UTP6Q9NYH9 597 aaKnown RBP-2.08□□□□□ -2.74
RNU6-542P-201ENST00000516405 ERVK-18Q9QC07 812 aa-2.08□□□□□ -2.74
RNU6-542P-201ENST00000516405 GHRLQ9UBU3 117 aa-2.08□□□□□ -2.74
RNU6-542P-201ENST00000516405 TAGLN3Q9UI15 199 aa-2.08□□□□□ -2.74
RNU6-542P-201ENST00000516405 STAP1Q9ULZ2 295 aa-2.08□□□□□ -2.74
RNU6-542P-201ENST00000516405 PPIEQ9UNP9 301 aaKnown RBP-2.08□□□□□ -2.74
RNU6-542P-201ENST00000516405 GPR132Q9UNW8 380 aa-2.08□□□□□ -2.74
RNU6-542P-201ENST00000516405 DNAH6Q9C0G6 4158 aa-2.08□□□□□ -2.74
RNU6-542P-201ENST00000516405 MCM3APO60318 1980 aa-2.09□□□□□ -2.74
RNU6-542P-201ENST00000516405 KDRP35968 1356 aa-2.09□□□□□ -2.74
RNU6-542P-201ENST00000516405 CLSPNQ9HAW4 1339 aa-2.09□□□□□ -2.74
RNU6-542P-201ENST00000516405 A0A1B0GVL5 298 aa-2.09□□□□□ -2.74
RNU6-542P-201ENST00000516405 IZUMO1RA6ND01 250 aa-2.09□□□□□ -2.74
RNU6-542P-201ENST00000516405 E7EWF7 191 aa-2.09□□□□□ -2.74
RNU6-542P-201ENST00000516405 CASKO14936 926 aa-2.09□□□□□ -2.74
RNU6-542P-201ENST00000516405 CTDSPLO15194 276 aa-2.09□□□□□ -2.74
RNU6-542P-201ENST00000516405 PRKYO43930 277 aa-2.09□□□□□ -2.74
RNU6-542P-201ENST00000516405 EIF1BO60739 113 aaKnown RBP-2.09□□□□□ -2.74
RNU6-542P-201ENST00000516405 CDH16O75309 829 aa-2.09□□□□□ -2.74
RNU6-542P-201ENST00000516405 RAD51DO75771 328 aa-2.09□□□□□ -2.74
RNU6-542P-201ENST00000516405 PRM1P04553 51 aa-2.09□□□□□ -2.74
RNU6-542P-201ENST00000516405 SAT1P21673 171 aa-2.09□□□□□ -2.74
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms