RNA–Protein interactions for RNA: ENST00000515035.5

TCOF1-214, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 2

Gene TCOF1, Length 5,240 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-214ENST00000515035 FLVCR2Q9UPI3 526 aa12.23□□□□□ -0.45
TCOF1-214ENST00000515035 PRELID3BQ9Y3B1 194 aa12.23□□□□□ -0.45
TCOF1-214ENST00000515035 BLACEA4D250 179 aa12.23□□□□□ -0.45
TCOF1-214ENST00000515035 GLCEO94923 617 aa12.23□□□□□ -0.45
TCOF1-214ENST00000515035 HOXD11P31277 338 aaPredicted RBP12.23□□□□□ -0.45
TCOF1-214ENST00000515035 LTC4SQ16873 150 aa12.23□□□□□ -0.45
TCOF1-214ENST00000515035 PKDCCQ504Y2 493 aa12.23□□□□□ -0.45
TCOF1-214ENST00000515035 C4orf17Q53FE4 359 aa12.23□□□□□ -0.45
TCOF1-214ENST00000515035 FAM74A1Q5RGS3 127 aa12.23□□□□□ -0.45
TCOF1-214ENST00000515035 ANKRD34AQ69YU3 496 aa12.23□□□□□ -0.45
TCOF1-214ENST00000515035 SLC16A14Q7RTX9 510 aa12.23□□□□□ -0.45
TCOF1-214ENST00000515035 RBM45Q8IUH3 476 aaKnown RBP12.23□□□□□ -0.45
TCOF1-214ENST00000515035 ANGPTL6Q8NI99 470 aa12.23□□□□□ -0.45
TCOF1-214ENST00000515035 AMDHD1Q96NU7 426 aa12.23□□□□□ -0.45
TCOF1-214ENST00000515035 PTDSS2Q9BVG9 487 aa12.23□□□□□ -0.45
TCOF1-214ENST00000515035 ZNF331Q9NQX6 463 aaPredicted RBP12.23□□□□□ -0.45
TCOF1-214ENST00000515035 GAR1Q9NY12 217 aaKnown RBP12.23□□□□□ -0.45
TCOF1-214ENST00000515035 LHX3Q9UBR4 397 aa12.23□□□□□ -0.45
TCOF1-214ENST00000515035 TUSC2O75896 110 aa12.23□□□□□ -0.45
TCOF1-214ENST00000515035 TPOP07202 933 aa12.23□□□□□ -0.45
TCOF1-214ENST00000515035 C1SP09871 688 aa12.23□□□□□ -0.45
TCOF1-214ENST00000515035 SLC35D3Q5M8T2 416 aa12.23□□□□□ -0.45
TCOF1-214ENST00000515035 TMEM123Q8N131 208 aa12.23□□□□□ -0.45
TCOF1-214ENST00000515035 SEMA6DQ8NFY4 1073 aa12.23□□□□□ -0.45
TCOF1-214ENST00000515035 NUDT8Q8WV74 236 aa12.23□□□□□ -0.45
TCOF1-214ENST00000515035 ISYNA1Q9NPH2 558 aa12.23□□□□□ -0.45
TCOF1-214ENST00000515035 OBP2BQ9NPH6 170 aa12.23□□□□□ -0.45
TCOF1-214ENST00000515035 PPP1R14DQ9NXH3 145 aa12.23□□□□□ -0.45
TCOF1-214ENST00000515035 GNG12Q9UBI6 72 aa12.23□□□□□ -0.45
TCOF1-214ENST00000515035 MN1Q10571 1320 aaPredicted RBP12.22□□□□□ -0.45
TCOF1-214ENST00000515035 TMX2-CTNND1H3BSU7 103 aa12.22□□□□□ -0.45
TCOF1-214ENST00000515035 NKX2-1P43699 371 aaPredicted RBP12.22□□□□□ -0.45
TCOF1-214ENST00000515035 P2RX1P51575 399 aa12.22□□□□□ -0.45
TCOF1-214ENST00000515035 EMP3P54852 163 aa12.22□□□□□ -0.45
TCOF1-214ENST00000515035 CLDN2P57739 230 aa12.22□□□□□ -0.45
TCOF1-214ENST00000515035 DCAF7P61962 342 aa12.22□□□□□ -0.45
TCOF1-214ENST00000515035 H3F3AP84243 136 aa12.22□□□□□ -0.45
TCOF1-214ENST00000515035 ERV3-1Q14264 604 aa12.22□□□□□ -0.45
TCOF1-214ENST00000515035 IHHQ14623 411 aa12.22□□□□□ -0.45
TCOF1-214ENST00000515035 LANCL3Q6ZV70 420 aa12.22□□□□□ -0.45
TCOF1-214ENST00000515035 TCTE3Q8IZS6 198 aa12.22□□□□□ -0.45
TCOF1-214ENST00000515035 RASD2Q96D21 266 aa12.22□□□□□ -0.45
TCOF1-214ENST00000515035 YIPF6Q96EC8 236 aa12.22□□□□□ -0.45
TCOF1-214ENST00000515035 SLC6A18Q96N87 628 aa12.22□□□□□ -0.45
TCOF1-214ENST00000515035 MS4A8Q9BY19 250 aa12.22□□□□□ -0.45
TCOF1-214ENST00000515035 GABARAPL3Q9BY60 117 aa12.22□□□□□ -0.45
TCOF1-214ENST00000515035 HRASLSQ9HDD0 168 aa12.22□□□□□ -0.45
TCOF1-214ENST00000515035 NECAP2Q9NVZ3 263 aa12.22□□□□□ -0.45
TCOF1-214ENST00000515035 NXT1Q9UKK6 140 aaKnown RBP12.22□□□□□ -0.45
TCOF1-214ENST00000515035 BRWD1Q9NSI6 2320 aa12.22□□□□□ -0.45
TCOF1-214ENST00000515035 RPA2P15927 270 aa12.22□□□□□ -0.45
TCOF1-214ENST00000515035 TNFRSF4P43489 277 aa12.22□□□□□ -0.45
TCOF1-214ENST00000515035 TGFBR3Q03167 851 aa12.22□□□□□ -0.45
TCOF1-214ENST00000515035 OR8G2PQ6IF36 304 aa12.22□□□□□ -0.45
TCOF1-214ENST00000515035 OR5K2Q8NHB8 316 aa12.22□□□□□ -0.45
TCOF1-214ENST00000515035 GABARAPL1Q9H0R8 117 aa12.22□□□□□ -0.45
TCOF1-214ENST00000515035 ASIC5Q9NY37 505 aa12.22□□□□□ -0.45
TCOF1-214ENST00000515035 MYOTQ9UBF9 498 aa12.22□□□□□ -0.45
TCOF1-214ENST00000515035 ZNF727A8MUV8 499 aa12.22□□□□□ -0.45
TCOF1-214ENST00000515035 A8MVM7 634 aa12.22□□□□□ -0.45
TCOF1-214ENST00000515035 J3QR89 54 aa12.22□□□□□ -0.45
TCOF1-214ENST00000515035 TMEM201Q5SNT2 666 aa12.22□□□□□ -0.45
TCOF1-214ENST00000515035 TEX261Q6UWH6 196 aa12.22□□□□□ -0.45
TCOF1-214ENST00000515035 GABRG1Q8N1C3 465 aa12.22□□□□□ -0.45
TCOF1-214ENST00000515035 PGBD5Q8N414 524 aa12.22□□□□□ -0.45
TCOF1-214ENST00000515035 MFSD9Q8NBP5 474 aa12.22□□□□□ -0.45
TCOF1-214ENST00000515035 OR4A16Q8NH70 328 aa12.22□□□□□ -0.45
TCOF1-214ENST00000515035 TPPP3Q9BW30 176 aa12.22□□□□□ -0.45
TCOF1-214ENST00000515035 ACOXLQ9NUZ1 547 aa12.22□□□□□ -0.45
TCOF1-214ENST00000515035 U3KQ87 197 aa12.22□□□□□ -0.45
TCOF1-214ENST00000515035 A6NCN8 305 aa12.22□□□□□ -0.45
TCOF1-214ENST00000515035 ALOX5APP20292 161 aa12.22□□□□□ -0.45
TCOF1-214ENST00000515035 TEKQ02763 1124 aa12.22□□□□□ -0.45
TCOF1-214ENST00000515035 TMEM99Q8N816 258 aa12.22□□□□□ -0.45
TCOF1-214ENST00000515035 TMEM18Q96B42 140 aa12.22□□□□□ -0.45
TCOF1-214ENST00000515035 TM4SF18Q96CE8 201 aa12.22□□□□□ -0.45
TCOF1-214ENST00000515035 WDR83Q9BRX9 315 aaKnown RBP12.22□□□□□ -0.45
TCOF1-214ENST00000515035 CABLES2Q9BTV7 478 aa12.22□□□□□ -0.45
TCOF1-214ENST00000515035 SRRQ9GZT4 340 aa12.22□□□□□ -0.45
TCOF1-214ENST00000515035 V9GYS6 101 aa12.22□□□□□ -0.45
TCOF1-214ENST00000515035 GLI3P10071 1580 aa12.21□□□□□ -0.45
TCOF1-214ENST00000515035 A0A1B0GUH1 482 aa12.21□□□□□ -0.45
TCOF1-214ENST00000515035 TRAF3IP2O43734 574 aaPredicted RBP12.21□□□□□ -0.45
TCOF1-214ENST00000515035 CD37P11049 281 aa12.21□□□□□ -0.45
TCOF1-214ENST00000515035 MGMTP16455 207 aa12.21□□□□□ -0.45
TCOF1-214ENST00000515035 NTF3P20783 257 aa12.21□□□□□ -0.45
TCOF1-214ENST00000515035 FCGR2CP31995 323 aa12.21□□□□□ -0.45
TCOF1-214ENST00000515035 LIPNQ5VXI9 398 aa12.21□□□□□ -0.45
TCOF1-214ENST00000515035 FAAP20Q6NZ36 180 aa12.21□□□□□ -0.45
TCOF1-214ENST00000515035 PRSS42Q7Z5A4 293 aa12.21□□□□□ -0.45
TCOF1-214ENST00000515035 OR2AK2Q8NG84 335 aa12.21□□□□□ -0.45
TCOF1-214ENST00000515035 OR4N2Q8NGD1 307 aa12.21□□□□□ -0.45
TCOF1-214ENST00000515035 MAP3K3Q99759 626 aa12.21□□□□□ -0.45
TCOF1-214ENST00000515035 TIMM29Q9BSF4 260 aa12.21□□□□□ -0.45
TCOF1-214ENST00000515035 HEYLQ9NQ87 328 aaPredicted RBP12.21□□□□□ -0.45
TCOF1-214ENST00000515035 ZNF586Q9NXT0 402 aa12.21□□□□□ -0.45
TCOF1-214ENST00000515035 TRAV36DV7A0A075B6V5 113 aa12.21□□□□□ -0.45
TCOF1-214ENST00000515035 KIR2DS5A0A0G2JLQ3 304 aa12.21□□□□□ -0.45
TCOF1-214ENST00000515035 A0A0G2JNG1 304 aa12.21□□□□□ -0.45
TCOF1-214ENST00000515035 SLC5A10A0PJK1 596 aa12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms