RNA–Protein interactions for RNA: ENST00000514987.5

NUP54-217, Transcript of nucleoporin 54, humanhuman

TSL 2 BASIC

Gene NUP54, Length 1,563 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-217ENST00000514987 FBXL3Q9UKT7 428 aa13.36□□□□□ -0.27
NUP54-217ENST00000514987 UNC13CQ8NB66 2214 aa13.36□□□□□ -0.27
NUP54-217ENST00000514987 EXPH5Q8NEV8 1989 aa13.35□□□□□ -0.27
NUP54-217ENST00000514987 IGLV3-32A0A0A0MS00 114 aa13.35□□□□□ -0.27
NUP54-217ENST00000514987 IGHV3-20A0A0C4DH32 117 aa13.35□□□□□ -0.27
NUP54-217ENST00000514987 TRBV11-1A0A0K0K1C0 115 aa13.35□□□□□ -0.27
NUP54-217ENST00000514987 A0A1B0GTH9 108 aa13.35□□□□□ -0.27
NUP54-217ENST00000514987 CPED1A4D0V7 1026 aa13.35□□□□□ -0.27
NUP54-217ENST00000514987 MEGF11A6BM72 1044 aa13.35□□□□□ -0.27
NUP54-217ENST00000514987 C17orf51A8MQB3 221 aa13.35□□□□□ -0.27
NUP54-217ENST00000514987 MS4A18H0YCH9 400 aa13.35□□□□□ -0.27
NUP54-217ENST00000514987 SLC17A2O00624 439 aa13.35□□□□□ -0.27
NUP54-217ENST00000514987 ZNF780AO75290 641 aaPredicted RBP13.35□□□□□ -0.27
NUP54-217ENST00000514987 AQP8O94778 261 aa13.35□□□□□ -0.27
NUP54-217ENST00000514987 HRGP04196 525 aa13.35□□□□□ -0.27
NUP54-217ENST00000514987 SULT1A3P0DMM9 295 aa13.35□□□□□ -0.27
NUP54-217ENST00000514987 SULT1A4P0DMN0 295 aa13.35□□□□□ -0.27
NUP54-217ENST00000514987 FSTP19883 344 aa13.35□□□□□ -0.27
NUP54-217ENST00000514987 CCKBRP32239 447 aa13.35□□□□□ -0.27
NUP54-217ENST00000514987 CAPZA1P52907 286 aa13.35□□□□□ -0.27
NUP54-217ENST00000514987 RAB11BQ15907 218 aa13.35□□□□□ -0.27
NUP54-217ENST00000514987 PCK2Q16822 640 aa13.35□□□□□ -0.27
NUP54-217ENST00000514987 BTBD16Q32M84 506 aa13.35□□□□□ -0.27
NUP54-217ENST00000514987 MS4A18Q3C1V0 323 aa13.35□□□□□ -0.27
NUP54-217ENST00000514987 ANKRD16Q6P6B7 361 aa13.35□□□□□ -0.27
NUP54-217ENST00000514987 ZNF782Q6ZMW2 699 aaPredicted RBP13.35□□□□□ -0.27
NUP54-217ENST00000514987 LRRC69Q6ZNQ3 347 aa13.35□□□□□ -0.27
NUP54-217ENST00000514987 CATSPERDQ86XM0 798 aa13.35□□□□□ -0.27
NUP54-217ENST00000514987 UBALD2Q8IYN6 164 aa13.35□□□□□ -0.27
NUP54-217ENST00000514987 SLC22A8Q8TCC7 542 aa13.35□□□□□ -0.27
NUP54-217ENST00000514987 MRGPRX4Q96LA9 322 aa13.35□□□□□ -0.27
NUP54-217ENST00000514987 UTP23Q9BRU9 249 aaKnown RBP13.35□□□□□ -0.27
NUP54-217ENST00000514987 ABHD6Q9BV23 337 aa13.35□□□□□ -0.27
NUP54-217ENST00000514987 SLC26A1Q9H2B4 701 aa13.35□□□□□ -0.27
NUP54-217ENST00000514987 ALKBH4Q9NXW9 302 aa13.35□□□□□ -0.27
NUP54-217ENST00000514987 PISDQ9UG56 409 aa13.35□□□□□ -0.27
NUP54-217ENST00000514987 ZNF222Q9UK12 451 aa13.35□□□□□ -0.27
NUP54-217ENST00000514987 ATXN7L1Q9ULK2 861 aaPredicted RBP13.35□□□□□ -0.27
NUP54-217ENST00000514987 DHDHQ9UQ10 334 aa13.35□□□□□ -0.27
NUP54-217ENST00000514987 B3GALT5Q9Y2C3 310 aa13.35□□□□□ -0.27
NUP54-217ENST00000514987 FER1L5A0AVI2 2057 aa13.35□□□□□ -0.27
NUP54-217ENST00000514987 SEC16AO15027 2179 aa13.34□□□□□ -0.27
NUP54-217ENST00000514987 RP1P56715 2156 aa13.34□□□□□ -0.27
NUP54-217ENST00000514987 MEIKINA0A087WXM9 373 aa13.34□□□□□ -0.27
NUP54-217ENST00000514987 A0A1B0GUH1 482 aa13.34□□□□□ -0.27
NUP54-217ENST00000514987 IQCJ-SCHIP1C9J366 451 aaPredicted RBP13.34□□□□□ -0.27
NUP54-217ENST00000514987 FABP7O15540 132 aa13.34□□□□□ -0.27
NUP54-217ENST00000514987 RBBP9O75884 186 aa13.34□□□□□ -0.27
NUP54-217ENST00000514987 SNAPC5O75971 98 aa13.34□□□□□ -0.27
NUP54-217ENST00000514987 GPANK1O95872 356 aa13.34□□□□□ -0.27
NUP54-217ENST00000514987 ISG15P05161 165 aa13.34□□□□□ -0.27
NUP54-217ENST00000514987 CSRP1P21291 193 aaKnown RBP13.34□□□□□ -0.27
NUP54-217ENST00000514987 FKBP2P26885 142 aaKnown RBP13.34□□□□□ -0.27
NUP54-217ENST00000514987 RPS27P42677 84 aaKnown RBP13.34□□□□□ -0.27
NUP54-217ENST00000514987 ZNF41P51814 821 aaPredicted RBP13.34□□□□□ -0.27
NUP54-217ENST00000514987 GPR85P60893 370 aa13.34□□□□□ -0.27
NUP54-217ENST00000514987 TLE3Q04726 772 aa13.34□□□□□ -0.27
NUP54-217ENST00000514987 SSBP1Q04837 148 aaKnown RBP13.34□□□□□ -0.27
NUP54-217ENST00000514987 Q5BKY6 102 aa13.34□□□□□ -0.27
NUP54-217ENST00000514987 GLT8D1Q68CQ7 371 aa13.34□□□□□ -0.27
NUP54-217ENST00000514987 GUSBP11Q6P575 273 aa13.34□□□□□ -0.27
NUP54-217ENST00000514987 ZNF704Q6ZNC4 412 aaPredicted RBP13.34□□□□□ -0.27
NUP54-217ENST00000514987 SLC35D2Q76EJ3 337 aa13.34□□□□□ -0.27
NUP54-217ENST00000514987 SERPINA12Q8IW75 414 aa13.34□□□□□ -0.27
NUP54-217ENST00000514987 SLC26A10Q8NG04 563 aa13.34□□□□□ -0.27
NUP54-217ENST00000514987 OR11H7Q8NGC8 314 aa13.34□□□□□ -0.27
NUP54-217ENST00000514987 SERINC1Q9NRX5 453 aa13.34□□□□□ -0.27
NUP54-217ENST00000514987 PPP4R1LQ9P1A2 415 aa13.34□□□□□ -0.27
NUP54-217ENST00000514987 COA3Q9Y2R0 106 aaPredicted RBP13.34□□□□□ -0.27
NUP54-217ENST00000514987 R4GMQ9 66 aa13.34□□□□□ -0.27
NUP54-217ENST00000514987 IGHV5-10-1A0A0J9YXX1 117 aa13.33□□□□□ -0.28
NUP54-217ENST00000514987 LOC100289279A0A1B0GTE1 492 aa13.33□□□□□ -0.28
NUP54-217ENST00000514987 A0A1W2PNV4 684 aa13.33□□□□□ -0.28
NUP54-217ENST00000514987 SSNA1O43805 119 aa13.33□□□□□ -0.28
NUP54-217ENST00000514987 WISP1O95388 367 aa13.33□□□□□ -0.28
NUP54-217ENST00000514987 CD37P11049 281 aa13.33□□□□□ -0.28
NUP54-217ENST00000514987 ACHEP22303 614 aa13.33□□□□□ -0.28
NUP54-217ENST00000514987 DHPSP49366 369 aaPredicted RBP13.33□□□□□ -0.28
NUP54-217ENST00000514987 CCL7P80098 99 aa13.33□□□□□ -0.28
NUP54-217ENST00000514987 OR7A5Q15622 319 aa13.33□□□□□ -0.28
NUP54-217ENST00000514987 ST3GAL2Q16842 350 aa13.33□□□□□ -0.28
NUP54-217ENST00000514987 TMEM205Q6UW68 189 aa13.33□□□□□ -0.28
NUP54-217ENST00000514987 TMPRSS9Q7Z410 1059 aa13.33□□□□□ -0.28
NUP54-217ENST00000514987 HDDC2Q7Z4H3 204 aa13.33□□□□□ -0.28
NUP54-217ENST00000514987 PPP1R3BQ86XI6 285 aa13.33□□□□□ -0.28
NUP54-217ENST00000514987 GLB1L2Q8IW92 636 aa13.33□□□□□ -0.28
NUP54-217ENST00000514987 SLC38A9Q8NBW4 561 aa13.33□□□□□ -0.28
NUP54-217ENST00000514987 ADPRHL1Q8NDY3 354 aa13.33□□□□□ -0.28
NUP54-217ENST00000514987 OR10AC1Q8NH08 325 aa13.33□□□□□ -0.28
NUP54-217ENST00000514987 SAP25Q8TEE9 199 aa13.33□□□□□ -0.28
NUP54-217ENST00000514987 ZNF431Q8TF32 576 aaPredicted RBP13.33□□□□□ -0.28
NUP54-217ENST00000514987 DACT3Q96B18 629 aaPredicted RBP13.33□□□□□ -0.28
NUP54-217ENST00000514987 KCNK17Q96T54 332 aa13.33□□□□□ -0.28
NUP54-217ENST00000514987 CMKLR1Q99788 373 aa13.33□□□□□ -0.28
NUP54-217ENST00000514987 KLRF1Q9NZS2 232 aa13.33□□□□□ -0.28
NUP54-217ENST00000514987 ING1Q9UK53 422 aaPredicted RBP13.33□□□□□ -0.28
NUP54-217ENST00000514987 HSPB11Q9Y547 144 aa13.33□□□□□ -0.28
NUP54-217ENST00000514987 LRP12Q9Y561 859 aa13.33□□□□□ -0.28
NUP54-217ENST00000514987 A0A087WV48 116 aa13.32□□□□□ -0.28
NUP54-217ENST00000514987 LIPT2A6NK58 231 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms