RNA–Protein interactions for RNA: ENST00000513346.5

TCOF1-211, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TCOF1, Length 4,646 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-211ENST00000513346 DOCK1Q14185 1865 aa10.33□□□□□ -0.76
TCOF1-211ENST00000513346 SLC33A1O00400 549 aaPredicted RBP10.32□□□□□ -0.76
TCOF1-211ENST00000513346 PLPP1O14494 284 aa10.32□□□□□ -0.76
TCOF1-211ENST00000513346 TAAR5O14804 337 aa10.32□□□□□ -0.76
TCOF1-211ENST00000513346 DIRAS3O95661 229 aa10.32□□□□□ -0.76
TCOF1-211ENST00000513346 ATF1P18846 271 aa10.32□□□□□ -0.76
TCOF1-211ENST00000513346 RAB1AP62820 205 aa10.32□□□□□ -0.76
TCOF1-211ENST00000513346 ACSM1Q08AH1 577 aa10.32□□□□□ -0.76
TCOF1-211ENST00000513346 SQSTM1Q13501 440 aa10.32□□□□□ -0.76
TCOF1-211ENST00000513346 INSL4Q14641 139 aa10.32□□□□□ -0.76
TCOF1-211ENST00000513346 KIAA0895LQ68EN5 471 aa10.32□□□□□ -0.76
TCOF1-211ENST00000513346 IL34Q6ZMJ4 242 aa10.32□□□□□ -0.76
TCOF1-211ENST00000513346 OR4C16Q8NGL9 310 aa10.32□□□□□ -0.76
TCOF1-211ENST00000513346 PPP1R1CQ8WVI7 109 aa10.32□□□□□ -0.76
TCOF1-211ENST00000513346 NAT6Q93015 286 aa10.32□□□□□ -0.76
TCOF1-211ENST00000513346 MIB2Q96AX9 1013 aa10.32□□□□□ -0.76
TCOF1-211ENST00000513346 DUSP23Q9BVJ7 150 aa10.32□□□□□ -0.76
TCOF1-211ENST00000513346 PLA2G12AQ9BZM1 189 aa10.32□□□□□ -0.76
TCOF1-211ENST00000513346 THAP10Q9P2Z0 257 aaPredicted RBP10.32□□□□□ -0.76
TCOF1-211ENST00000513346 SRPK3Q9UPE1 567 aa10.32□□□□□ -0.76
TCOF1-211ENST00000513346 ETHE1O95571 254 aa10.32□□□□□ -0.76
TCOF1-211ENST00000513346 FABP9Q0Z7S8 132 aa10.32□□□□□ -0.76
TCOF1-211ENST00000513346 PLA1AQ53H76 456 aa10.32□□□□□ -0.76
TCOF1-211ENST00000513346 SLC35D3Q5M8T2 416 aa10.32□□□□□ -0.76
TCOF1-211ENST00000513346 OR5D14Q8NGL3 314 aa10.32□□□□□ -0.76
TCOF1-211ENST00000513346 DERL3Q96Q80 235 aa10.32□□□□□ -0.76
TCOF1-211ENST00000513346 CMSS1Q9BQ75 279 aaKnown RBP10.32□□□□□ -0.76
TCOF1-211ENST00000513346 OR11A1Q9GZK7 315 aa10.32□□□□□ -0.76
TCOF1-211ENST00000513346 ZMAT3Q9HA38 289 aaKnown RBP10.32□□□□□ -0.76
TCOF1-211ENST00000513346 BCL2L10Q9HD36 194 aa10.32□□□□□ -0.76
TCOF1-211ENST00000513346 SLC52A3Q9NQ40 469 aa10.32□□□□□ -0.76
TCOF1-211ENST00000513346 C1orf123Q9NWV4 160 aa10.32□□□□□ -0.76
TCOF1-211ENST00000513346 PCYT1BQ9Y5K3 369 aaPredicted RBP10.32□□□□□ -0.76
TCOF1-211ENST00000513346 BCAT2O15382 392 aaPredicted RBP10.32□□□□□ -0.76
TCOF1-211ENST00000513346 CYTIPO60759 359 aa10.32□□□□□ -0.76
TCOF1-211ENST00000513346 TXNDC12O95881 172 aa10.32□□□□□ -0.76
TCOF1-211ENST00000513346 SCGB1D1O95968 90 aa10.32□□□□□ -0.76
TCOF1-211ENST00000513346 CLUP10909 449 aa10.32□□□□□ -0.76
TCOF1-211ENST00000513346 CRABP1P29762 137 aa10.32□□□□□ -0.76
TCOF1-211ENST00000513346 CTHP32929 405 aa10.32□□□□□ -0.76
TCOF1-211ENST00000513346 ZNF84P51523 738 aa10.32□□□□□ -0.76
TCOF1-211ENST00000513346 CDKN3Q16667 212 aa10.32□□□□□ -0.76
TCOF1-211ENST00000513346 OVCH2Q7RTZ1 564 aa10.32□□□□□ -0.76
TCOF1-211ENST00000513346 ABI3BPQ7Z7G0 1075 aa10.32□□□□□ -0.76
TCOF1-211ENST00000513346 OR5M9Q8NGP3 310 aa10.32□□□□□ -0.76
TCOF1-211ENST00000513346 GIMAP5Q96F15 307 aa10.32□□□□□ -0.76
TCOF1-211ENST00000513346 PTDSS2Q9BVG9 487 aa10.32□□□□□ -0.76
TCOF1-211ENST00000513346 OPA3Q9H6K4 179 aa10.32□□□□□ -0.76
TCOF1-211ENST00000513346 PIGBOS1A0A0B4J2F0 54 aa10.32□□□□□ -0.76
TCOF1-211ENST00000513346 C17orf105B2RV13 164 aa10.32□□□□□ -0.76
TCOF1-211ENST00000513346 IGLV3-27P01718 113 aa10.32□□□□□ -0.76
TCOF1-211ENST00000513346 CD3DP04234 171 aa10.32□□□□□ -0.76
TCOF1-211ENST00000513346 OR13C7P0DN81 318 aa10.32□□□□□ -0.76
TCOF1-211ENST00000513346 OR7E24Q6IFN5 339 aa10.32□□□□□ -0.76
TCOF1-211ENST00000513346 C11orf87Q6NUJ2 197 aa10.32□□□□□ -0.76
TCOF1-211ENST00000513346 TMEM64Q6YI46 380 aa10.32□□□□□ -0.76
TCOF1-211ENST00000513346 GALNT16Q8N428 558 aa10.32□□□□□ -0.76
TCOF1-211ENST00000513346 LILRA3Q8N6C8 439 aaPredicted RBP10.32□□□□□ -0.76
TCOF1-211ENST00000513346 NAXEQ8NCW5 288 aa10.32□□□□□ -0.76
TCOF1-211ENST00000513346 CCDC54Q8NEL0 328 aa10.32□□□□□ -0.76
TCOF1-211ENST00000513346 LFNGQ8NES3 379 aa10.32□□□□□ -0.76
TCOF1-211ENST00000513346 OR5T1Q8NG75 326 aa10.32□□□□□ -0.76
TCOF1-211ENST00000513346 AKR7LQ8NHP1 331 aa10.32□□□□□ -0.76
TCOF1-211ENST00000513346 FRZBQ92765 325 aa10.32□□□□□ -0.76
TCOF1-211ENST00000513346 HGDQ93099 445 aa10.32□□□□□ -0.76
TCOF1-211ENST00000513346 ELSPBP1Q96BH3 223 aa10.32□□□□□ -0.76
TCOF1-211ENST00000513346 PGAM5Q96HS1 289 aa10.32□□□□□ -0.76
TCOF1-211ENST00000513346 RHOFQ9HBH0 211 aa10.32□□□□□ -0.76
TCOF1-211ENST00000513346 EHFQ9NZC4 300 aa10.32□□□□□ -0.76
TCOF1-211ENST00000513346 CABIN1Q9Y6J0 2220 aa10.32□□□□□ -0.76
TCOF1-211ENST00000513346 TTC3P53804 2025 aa10.31□□□□□ -0.76
TCOF1-211ENST00000513346 UMAD1C9J7I0 102 aa10.31□□□□□ -0.76
TCOF1-211ENST00000513346 DCTN6O00399 190 aa10.31□□□□□ -0.76
TCOF1-211ENST00000513346 CPN1P15169 458 aa10.31□□□□□ -0.76
TCOF1-211ENST00000513346 CSNK1EP49674 416 aaKnown RBP10.31□□□□□ -0.76
TCOF1-211ENST00000513346 GLO1Q04760 184 aa10.31□□□□□ -0.76
TCOF1-211ENST00000513346 ZNF626Q68DY1 528 aa10.31□□□□□ -0.76
TCOF1-211ENST00000513346 COX15Q7KZN9 410 aa10.31□□□□□ -0.76
TCOF1-211ENST00000513346 ZNF511Q8NB15 262 aa10.31□□□□□ -0.76
TCOF1-211ENST00000513346 PHYHIPLQ96FC7 376 aa10.31□□□□□ -0.76
TCOF1-211ENST00000513346 TRMT61AQ96FX7 289 aaKnown RBP10.31□□□□□ -0.76
TCOF1-211ENST00000513346 ASB16Q96NS5 453 aa10.31□□□□□ -0.76
TCOF1-211ENST00000513346 KCMF1Q9P0J7 381 aa10.31□□□□□ -0.76
TCOF1-211ENST00000513346 OR7A5Q15622 319 aa10.31□□□□□ -0.76
TCOF1-211ENST00000513346 IAH1Q2TAA2 248 aaPredicted RBP10.31□□□□□ -0.76
TCOF1-211ENST00000513346 LRRTM1Q86UE6 522 aa10.31□□□□□ -0.76
TCOF1-211ENST00000513346 MMP21Q8N119 569 aa10.31□□□□□ -0.76
TCOF1-211ENST00000513346 OR5K2Q8NHB8 316 aa10.31□□□□□ -0.76
TCOF1-211ENST00000513346 BMFQ96LC9 184 aa10.31□□□□□ -0.76
TCOF1-211ENST00000513346 A4GNTQ9UNA3 340 aa10.31□□□□□ -0.76
TCOF1-211ENST00000513346 AHCTF1Q8WYP5 2266 aa10.31□□□□□ -0.76
TCOF1-211ENST00000513346 SELENOFO60613 162 aa10.31□□□□□ -0.76
TCOF1-211ENST00000513346 LDB3O75112 727 aa10.31□□□□□ -0.76
TCOF1-211ENST00000513346 NAGAP17050 411 aa10.31□□□□□ -0.76
TCOF1-211ENST00000513346 RFC3P40938 356 aa10.31□□□□□ -0.76
TCOF1-211ENST00000513346 FXYD4P59646 89 aa10.31□□□□□ -0.76
TCOF1-211ENST00000513346 MPPED2Q15777 294 aa10.31□□□□□ -0.76
TCOF1-211ENST00000513346 ETFDHQ16134 617 aa10.31□□□□□ -0.76
TCOF1-211ENST00000513346 PDZD11Q5EBL8 140 aa10.31□□□□□ -0.76
TCOF1-211ENST00000513346 GLYATL3Q5SZD4 288 aa10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms