RNA–Protein interactions for RNA: ENST00000513024.5

LIMCH1-218, Transcript of LIM and calponin homology domains 1, humanhuman

TSL 1 (best) BASIC

Gene LIMCH1, Length 5,129 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMCH1-218ENST00000513024 OR10J4P0C629 311 aa8.06□□□□□ -1.12
LIMCH1-218ENST00000513024 CLEC12BQ2HXU8 276 aa8.06□□□□□ -1.12
LIMCH1-218ENST00000513024 VWA2Q5GFL6 755 aa8.06□□□□□ -1.12
LIMCH1-218ENST00000513024 EXOSC6Q5RKV6 272 aaKnown RBP8.06□□□□□ -1.12
LIMCH1-218ENST00000513024 MORN1Q5T089 497 aa8.06□□□□□ -1.12
LIMCH1-218ENST00000513024 PIP5KL1Q5T9C9 394 aa8.06□□□□□ -1.12
LIMCH1-218ENST00000513024 SFXN4Q6P4A7 337 aa8.06□□□□□ -1.12
LIMCH1-218ENST00000513024 TMEM81Q6P7N7 255 aa8.06□□□□□ -1.12
LIMCH1-218ENST00000513024 TRAPPC6BQ86SZ2 158 aa8.06□□□□□ -1.12
LIMCH1-218ENST00000513024 PRR22Q8IZ63 422 aa8.06□□□□□ -1.12
LIMCH1-218ENST00000513024 FAM24BQ8N5W8 94 aa8.06□□□□□ -1.12
LIMCH1-218ENST00000513024 GOT1L1Q8NHS2 421 aaPredicted RBP8.06□□□□□ -1.12
LIMCH1-218ENST00000513024 STT3BQ8TCJ2 826 aa8.06□□□□□ -1.12
LIMCH1-218ENST00000513024 IP6K3Q96PC2 410 aa8.06□□□□□ -1.12
LIMCH1-218ENST00000513024 GPA33Q99795 319 aa8.06□□□□□ -1.12
LIMCH1-218ENST00000513024 C2orf42Q9NWW7 574 aa8.06□□□□□ -1.12
LIMCH1-218ENST00000513024 STEAP1Q9UHE8 339 aa8.06□□□□□ -1.12
LIMCH1-218ENST00000513024 RNASEK-C17orf49H0YIS7 233 aa8.06□□□□□ -1.12
LIMCH1-218ENST00000513024 HMGN2P05204 90 aaKnown RBP8.06□□□□□ -1.12
LIMCH1-218ENST00000513024 EDN3P14138 238 aa8.06□□□□□ -1.12
LIMCH1-218ENST00000513024 GABRB1P18505 474 aa8.06□□□□□ -1.12
LIMCH1-218ENST00000513024 SLC6A12P48065 614 aa8.06□□□□□ -1.12
LIMCH1-218ENST00000513024 EPHA5P54756 1037 aa8.06□□□□□ -1.12
LIMCH1-218ENST00000513024 CLDN12P56749 244 aa8.06□□□□□ -1.12
LIMCH1-218ENST00000513024 TTC32Q5I0X7 151 aa8.06□□□□□ -1.12
LIMCH1-218ENST00000513024 PODNL1Q6PEZ8 512 aa8.06□□□□□ -1.12
LIMCH1-218ENST00000513024 UNC5DQ6UXZ4 953 aa8.06□□□□□ -1.12
LIMCH1-218ENST00000513024 ZNF600Q6ZNG1 722 aa8.06□□□□□ -1.12
LIMCH1-218ENST00000513024 CBLL1Q75N03 491 aa8.06□□□□□ -1.12
LIMCH1-218ENST00000513024 NLGN4XQ8N0W4 816 aa8.06□□□□□ -1.12
LIMCH1-218ENST00000513024 TMEM163Q8TC26 289 aa8.06□□□□□ -1.12
LIMCH1-218ENST00000513024 GCDHQ92947 438 aaPredicted RBP8.06□□□□□ -1.12
LIMCH1-218ENST00000513024 ALOXE3Q9BYJ1 711 aa8.06□□□□□ -1.12
LIMCH1-218ENST00000513024 SEMA4GQ9NTN9 838 aa8.06□□□□□ -1.12
LIMCH1-218ENST00000513024 A0A1B0GTQ1 180 aa8.06□□□□□ -1.12
LIMCH1-218ENST00000513024 A0A1W2PPC1 479 aa8.06□□□□□ -1.12
LIMCH1-218ENST00000513024 H3BNC9 293 aa8.06□□□□□ -1.12
LIMCH1-218ENST00000513024 MKRN2OSH3BPM6 223 aa8.06□□□□□ -1.12
LIMCH1-218ENST00000513024 CLDN34H7C241 214 aa8.06□□□□□ -1.12
LIMCH1-218ENST00000513024 ACP2P11117 423 aa8.06□□□□□ -1.12
LIMCH1-218ENST00000513024 SFTPDP35247 375 aa8.06□□□□□ -1.12
LIMCH1-218ENST00000513024 GRM7Q14831 915 aa8.06□□□□□ -1.12
LIMCH1-218ENST00000513024 NCMAPQ5T1S8 102 aa8.06□□□□□ -1.12
LIMCH1-218ENST00000513024 TMEM244Q5VVB8 128 aa8.06□□□□□ -1.12
LIMCH1-218ENST00000513024 ZNF100Q8IYN0 542 aa8.06□□□□□ -1.12
LIMCH1-218ENST00000513024 RNF175Q8N4F7 328 aa8.06□□□□□ -1.12
LIMCH1-218ENST00000513024 OR13C8Q8NGS7 320 aa8.06□□□□□ -1.12
LIMCH1-218ENST00000513024 FGGYQ96C11 551 aa8.06□□□□□ -1.12
LIMCH1-218ENST00000513024 RPUSD4Q96CM3 377 aaKnown RBP8.06□□□□□ -1.12
LIMCH1-218ENST00000513024 AKR1E2Q96JD6 320 aa8.06□□□□□ -1.12
LIMCH1-218ENST00000513024 ENKD1Q9H0I2 346 aa8.06□□□□□ -1.12
LIMCH1-218ENST00000513024 HHLA2Q9UM44 414 aa8.06□□□□□ -1.12
LIMCH1-218ENST00000513024 ARID1AO14497 2285 aa8.06□□□□□ -1.12
LIMCH1-218ENST00000513024 A0A1W2PNV4 684 aa8.06□□□□□ -1.12
LIMCH1-218ENST00000513024 MPPED1O15442 326 aa8.06□□□□□ -1.12
LIMCH1-218ENST00000513024 CBX7O95931 251 aa8.06□□□□□ -1.12
LIMCH1-218ENST00000513024 FUT1P19526 365 aa8.06□□□□□ -1.12
LIMCH1-218ENST00000513024 SPINT3P49223 89 aa8.06□□□□□ -1.12
LIMCH1-218ENST00000513024 MAP2K6P52564 334 aa8.06□□□□□ -1.12
LIMCH1-218ENST00000513024 SHC2P98077 582 aa8.06□□□□□ -1.12
LIMCH1-218ENST00000513024 FAM74A1Q5RGS3 127 aa8.06□□□□□ -1.12
LIMCH1-218ENST00000513024 SPRED1Q7Z699 444 aa8.06□□□□□ -1.12
LIMCH1-218ENST00000513024 OR5D14Q8NGL3 314 aa8.06□□□□□ -1.12
LIMCH1-218ENST00000513024 ABHD6Q9BV23 337 aa8.06□□□□□ -1.12
LIMCH1-218ENST00000513024 SIRT7Q9NRC8 400 aa8.06□□□□□ -1.12
LIMCH1-218ENST00000513024 PISDQ9UG56 409 aa8.06□□□□□ -1.12
LIMCH1-218ENST00000513024 RNF150Q9ULK6 438 aa8.06□□□□□ -1.12
LIMCH1-218ENST00000513024 SYT5O00445 386 aa8.05□□□□□ -1.12
LIMCH1-218ENST00000513024 DVL1O14640 695 aa8.05□□□□□ -1.12
LIMCH1-218ENST00000513024 OR2J2O76002 312 aa8.05□□□□□ -1.12
LIMCH1-218ENST00000513024 LPLP06858 475 aa8.05□□□□□ -1.12
LIMCH1-218ENST00000513024 AADACP22760 399 aa8.05□□□□□ -1.12
LIMCH1-218ENST00000513024 GCH1P30793 250 aa8.05□□□□□ -1.12
LIMCH1-218ENST00000513024 ACAA2P42765 397 aaKnown RBP8.05□□□□□ -1.12
LIMCH1-218ENST00000513024 RFX2P48378 723 aa8.05□□□□□ -1.12
LIMCH1-218ENST00000513024 PPOXP50336 477 aa8.05□□□□□ -1.12
LIMCH1-218ENST00000513024 DAPP51397 102 aa8.05□□□□□ -1.12
LIMCH1-218ENST00000513024 DVL1P1P54792 670 aaPredicted RBP8.05□□□□□ -1.12
LIMCH1-218ENST00000513024 TMEM35AQ53FP2 167 aa8.05□□□□□ -1.12
LIMCH1-218ENST00000513024 RPL22L1Q6P5R6 122 aaKnown RBP8.05□□□□□ -1.12
LIMCH1-218ENST00000513024 GRINAQ7Z429 371 aa8.05□□□□□ -1.12
LIMCH1-218ENST00000513024 APCDD1Q8J025 514 aa8.05□□□□□ -1.12
LIMCH1-218ENST00000513024 LGALS14Q8TCE9 139 aa8.05□□□□□ -1.12
LIMCH1-218ENST00000513024 RXFP4Q8TDU9 374 aa8.05□□□□□ -1.12
LIMCH1-218ENST00000513024 IL22RA2Q969J5 263 aa8.05□□□□□ -1.12
LIMCH1-218ENST00000513024 PACRGQ96M98 296 aaPredicted RBP8.05□□□□□ -1.12
LIMCH1-218ENST00000513024 OR5M11Q96RB7 305 aa8.05□□□□□ -1.12
LIMCH1-218ENST00000513024 LPAR4Q99677 370 aa8.05□□□□□ -1.12
LIMCH1-218ENST00000513024 FAAP24Q9BTP7 215 aa8.05□□□□□ -1.12
LIMCH1-218ENST00000513024 MVB12BQ9H7P6 319 aa8.05□□□□□ -1.12
LIMCH1-218ENST00000513024 CSAG2Q9Y5P2 127 aa8.05□□□□□ -1.12
LIMCH1-218ENST00000513024 TRAPPC1Q9Y5R8 145 aa8.05□□□□□ -1.12
LIMCH1-218ENST00000513024 A0A1W2PQU0 124 aa8.05□□□□□ -1.12
LIMCH1-218ENST00000513024 DLL1O00548 723 aa8.05□□□□□ -1.12
LIMCH1-218ENST00000513024 ST8SIA3O43173 380 aa8.05□□□□□ -1.12
LIMCH1-218ENST00000513024 SFTA3P0C7M3 94 aa8.05□□□□□ -1.12
LIMCH1-218ENST00000513024 DIO1P49895 249 aa8.05□□□□□ -1.12
LIMCH1-218ENST00000513024 GLYR1Q49A26 553 aaPredicted RBP8.05□□□□□ -1.12
LIMCH1-218ENST00000513024 OR4A47Q6IF82 309 aa8.05□□□□□ -1.12
LIMCH1-218ENST00000513024 MAMDC2Q7Z304 686 aaPredicted RBP8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms