RNA–Protein interactions for RNA: ENST00000512340.5

NR1I3-231, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best)

Gene NR1I3, Length 891 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-231ENST00000512340 NDUFA13Q9P0J0 144 aa6.55□□□□□ -1.36
NR1I3-231ENST00000512340 ZNF346Q9UL40 294 aaKnown RBP6.55□□□□□ -1.36
NR1I3-231ENST00000512340 SIGLEC7Q9Y286 467 aa6.55□□□□□ -1.36
NR1I3-231ENST00000512340 AP4S1Q9Y587 144 aa6.55□□□□□ -1.36
NR1I3-231ENST00000512340 SLC25A15Q9Y619 301 aa6.55□□□□□ -1.36
NR1I3-231ENST00000512340 CDH10Q9Y6N8 788 aa6.55□□□□□ -1.36
NR1I3-231ENST00000512340 CADP27708 2225 aa6.54□□□□□ -1.36
NR1I3-231ENST00000512340 HIVEP1P15822 2718 aa6.54□□□□□ -1.36
NR1I3-231ENST00000512340 A0A096LPE4 126 aa6.54□□□□□ -1.36
NR1I3-231ENST00000512340 A0A1W2PPZ6 126 aa6.54□□□□□ -1.36
NR1I3-231ENST00000512340 TCRBV3S1A0A5B6 114 aa6.54□□□□□ -1.36
NR1I3-231ENST00000512340 RIIAD1A6NNX1 92 aa6.54□□□□□ -1.36
NR1I3-231ENST00000512340 C12orf71A8MTZ7 269 aa6.54□□□□□ -1.36
NR1I3-231ENST00000512340 H3BN98 237 aa6.54□□□□□ -1.36
NR1I3-231ENST00000512340 ABCD4O14678 606 aa6.54□□□□□ -1.36
NR1I3-231ENST00000512340 HS3ST1O14792 307 aa6.54□□□□□ -1.36
NR1I3-231ENST00000512340 ARPC3O15145 178 aa6.54□□□□□ -1.36
NR1I3-231ENST00000512340 KLF4O43474 513 aa6.54□□□□□ -1.36
NR1I3-231ENST00000512340 PTP4A3O75365 173 aa6.54□□□□□ -1.36
NR1I3-231ENST00000512340 KHDRBS3O75525 346 aaKnown RBP6.54□□□□□ -1.36
NR1I3-231ENST00000512340 THBDP07204 575 aa6.54□□□□□ -1.36
NR1I3-231ENST00000512340 ERCC1P07992 297 aaPredicted RBP6.54□□□□□ -1.36
NR1I3-231ENST00000512340 B4GALT1P15291 398 aa6.54□□□□□ -1.36
NR1I3-231ENST00000512340 CBR1P16152 277 aa6.54□□□□□ -1.36
NR1I3-231ENST00000512340 PAICSP22234 425 aaKnown RBP6.54□□□□□ -1.36
NR1I3-231ENST00000512340 CD40P25942 277 aa6.54□□□□□ -1.36
NR1I3-231ENST00000512340 NTF4P34130 210 aa6.54□□□□□ -1.36
NR1I3-231ENST00000512340 LIMS1P48059 325 aa6.54□□□□□ -1.36
NR1I3-231ENST00000512340 GSSP48637 474 aa6.54□□□□□ -1.36
NR1I3-231ENST00000512340 CENPAP49450 140 aa6.54□□□□□ -1.36
NR1I3-231ENST00000512340 SELENOVP59797 346 aa6.54□□□□□ -1.36
NR1I3-231ENST00000512340 MRPS34P82930 218 aaKnown RBP6.54□□□□□ -1.36
NR1I3-231ENST00000512340 HSF2Q03933 536 aa6.54□□□□□ -1.36
NR1I3-231ENST00000512340 BSPH1Q075Z2 132 aa6.54□□□□□ -1.36
NR1I3-231ENST00000512340 KRR1Q13601 381 aaKnown RBP6.54□□□□□ -1.36
NR1I3-231ENST00000512340 SGCAQ16586 387 aa6.54□□□□□ -1.36
NR1I3-231ENST00000512340 SLC36A3Q495N2 470 aa6.54□□□□□ -1.36
NR1I3-231ENST00000512340 HIKESHIQ53FT3 197 aa6.54□□□□□ -1.36
NR1I3-231ENST00000512340 C10orf128Q5T292 105 aa6.54□□□□□ -1.36
NR1I3-231ENST00000512340 ARMC4Q5T2S8 1044 aa6.54□□□□□ -1.36
NR1I3-231ENST00000512340 AGAP6Q5VW22 663 aa6.54□□□□□ -1.36
NR1I3-231ENST00000512340 ADAM5Q6NVV9 412 aa6.54□□□□□ -1.36
NR1I3-231ENST00000512340 SEZ6L2Q6UXD5 910 aa6.54□□□□□ -1.36
NR1I3-231ENST00000512340 RASSF6Q6ZTQ3 369 aa6.54□□□□□ -1.36
NR1I3-231ENST00000512340 ZNF627Q7L945 461 aa6.54□□□□□ -1.36
NR1I3-231ENST00000512340 ZER1Q7Z7L7 766 aa6.54□□□□□ -1.36
NR1I3-231ENST00000512340 ZDHHC13Q8IUH4 622 aa6.54□□□□□ -1.36
NR1I3-231ENST00000512340 FBXL14Q8N1E6 418 aa6.54□□□□□ -1.36
NR1I3-231ENST00000512340 SVOPLQ8N434 492 aa6.54□□□□□ -1.36
NR1I3-231ENST00000512340 SLC22A24Q8N4F4 322 aa6.54□□□□□ -1.36
NR1I3-231ENST00000512340 CLDN22Q8N7P3 220 aa6.54□□□□□ -1.36
NR1I3-231ENST00000512340 ZNF611Q8N823 705 aa6.54□□□□□ -1.36
NR1I3-231ENST00000512340 ATG16L2Q8NAA4 619 aa6.54□□□□□ -1.36
NR1I3-231ENST00000512340 AQP11Q8NBQ7 271 aa6.54□□□□□ -1.36
NR1I3-231ENST00000512340 PAPD5Q8NDF8 572 aaKnown RBP6.54□□□□□ -1.36
NR1I3-231ENST00000512340 OR10H5Q8NGA6 315 aa6.54□□□□□ -1.36
NR1I3-231ENST00000512340 OR10G2Q8NGC3 310 aa6.54□□□□□ -1.36
NR1I3-231ENST00000512340 TMEM171Q8WVE6 324 aa6.54□□□□□ -1.36
NR1I3-231ENST00000512340 MCHR2Q969V1 340 aa6.54□□□□□ -1.36
NR1I3-231ENST00000512340 TRMT61AQ96FX7 289 aaKnown RBP6.54□□□□□ -1.36
NR1I3-231ENST00000512340 PLEKHA8Q96JA3 519 aa6.54□□□□□ -1.36
NR1I3-231ENST00000512340 ERMAPQ96PL5 475 aaPredicted RBP6.54□□□□□ -1.36
NR1I3-231ENST00000512340 SLC38A2Q96QD8 506 aa6.54□□□□□ -1.36
NR1I3-231ENST00000512340 SNX18Q96RF0 628 aa6.54□□□□□ -1.36
NR1I3-231ENST00000512340 CCL19Q99731 98 aa6.54□□□□□ -1.36
NR1I3-231ENST00000512340 FAM192AQ9GZU8 254 aa6.54□□□□□ -1.36
NR1I3-231ENST00000512340 OR52D1Q9H346 318 aa6.54□□□□□ -1.36
NR1I3-231ENST00000512340 SEC61A2Q9H9S3 476 aa6.54□□□□□ -1.36
NR1I3-231ENST00000512340 UBTD1Q9HAC8 227 aa6.54□□□□□ -1.36
NR1I3-231ENST00000512340 NRIP3Q9NQ35 241 aa6.54□□□□□ -1.36
NR1I3-231ENST00000512340 TBC1D23Q9NUY8 699 aa6.54□□□□□ -1.36
NR1I3-231ENST00000512340 ARMC1Q9NVT9 282 aa6.54□□□□□ -1.36
NR1I3-231ENST00000512340 BEX4Q9NWD9 120 aaPredicted RBP6.54□□□□□ -1.36
NR1I3-231ENST00000512340 PDP1Q9P0J1 537 aaPredicted RBP6.54□□□□□ -1.36
NR1I3-231ENST00000512340 GPR160Q9UJ42 338 aa6.54□□□□□ -1.36
NR1I3-231ENST00000512340 POLR1DQ9Y2S0 133 aa6.54□□□□□ -1.36
NR1I3-231ENST00000512340 ORC6Q9Y5N6 252 aa6.54□□□□□ -1.36
NR1I3-231ENST00000512340 IER3IP1Q9Y5U9 82 aa6.54□□□□□ -1.36
NR1I3-231ENST00000512340 ATP23Q9Y6H3 246 aa6.54□□□□□ -1.36
NR1I3-231ENST00000512340 U3KQV3 271 aa6.54□□□□□ -1.36
NR1I3-231ENST00000512340 NF1P21359 2839 aa6.54□□□□□ -1.36
NR1I3-231ENST00000512340 PLCE1Q9P212 2302 aa6.53□□□□□ -1.36
NR1I3-231ENST00000512340 TEX13CA0A0J9YWL9 993 aa6.53□□□□□ -1.36
NR1I3-231ENST00000512340 A0A1W2PPL8 197 aa6.53□□□□□ -1.36
NR1I3-231ENST00000512340 PRSS37A4D1T9 235 aa6.53□□□□□ -1.36
NR1I3-231ENST00000512340 DEFB108AA8MXU0 73 aa6.53□□□□□ -1.36
NR1I3-231ENST00000512340 ANKRD65E5RJM6 399 aa6.53□□□□□ -1.36
NR1I3-231ENST00000512340 CDC42EP2O14613 210 aa6.53□□□□□ -1.36
NR1I3-231ENST00000512340 CASQ2O14958 399 aaPredicted RBP6.53□□□□□ -1.36
NR1I3-231ENST00000512340 SMPD2O60906 423 aa6.53□□□□□ -1.36
NR1I3-231ENST00000512340 HMGN1P05114 100 aa6.53□□□□□ -1.36
NR1I3-231ENST00000512340 PRF1P14222 555 aa6.53□□□□□ -1.36
NR1I3-231ENST00000512340 MSR1P21757 451 aa6.53□□□□□ -1.36
NR1I3-231ENST00000512340 EDNRAP25101 427 aa6.53□□□□□ -1.36
NR1I3-231ENST00000512340 APLNRP35414 380 aa6.53□□□□□ -1.36
NR1I3-231ENST00000512340 PTDSS1P48651 473 aaKnown RBP6.53□□□□□ -1.36
NR1I3-231ENST00000512340 CDH11P55287 796 aa6.53□□□□□ -1.36
NR1I3-231ENST00000512340 RAB1AP62820 205 aa6.53□□□□□ -1.36
NR1I3-231ENST00000512340 GLO1Q04760 184 aa6.53□□□□□ -1.36
NR1I3-231ENST00000512340 NPRL3Q12980 569 aa6.53□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms