RNA–Protein interactions for RNA: ENST00000511767.3

PDLIM5-216, Transcript of PDZ and LIM domain 5, humanhuman

TSL 5

Gene PDLIM5, Length 463 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-216ENST00000511767 ADAM18Q9Y3Q7 739 aa13.94□□□□□ -0.18
PDLIM5-216ENST00000511767 UNC119BA6NIH7 251 aa13.93□□□□□ -0.18
PDLIM5-216ENST00000511767 SMAD7O15105 426 aaKnown RBP13.93□□□□□ -0.18
PDLIM5-216ENST00000511767 AHCYL1O43865 530 aa13.93□□□□□ -0.18
PDLIM5-216ENST00000511767 NDUFB2O95178 105 aa13.93□□□□□ -0.18
PDLIM5-216ENST00000511767 LY6G6DO95868 133 aa13.93□□□□□ -0.18
PDLIM5-216ENST00000511767 F12P00748 615 aaPredicted RBP13.93□□□□□ -0.18
PDLIM5-216ENST00000511767 NPR2P20594 1047 aa13.93□□□□□ -0.18
PDLIM5-216ENST00000511767 GLRXP35754 106 aa13.93□□□□□ -0.18
PDLIM5-216ENST00000511767 CD47Q08722 323 aa13.93□□□□□ -0.18
PDLIM5-216ENST00000511767 SGCAQ16586 387 aa13.93□□□□□ -0.18
PDLIM5-216ENST00000511767 MSMPQ1L6U9 139 aa13.93□□□□□ -0.18
PDLIM5-216ENST00000511767 SLC36A2Q495M3 483 aa13.93□□□□□ -0.18
PDLIM5-216ENST00000511767 TMEM53Q6P2H8 277 aa13.93□□□□□ -0.18
PDLIM5-216ENST00000511767 FOXL2NBQ6ZUU3 175 aa13.93□□□□□ -0.18
PDLIM5-216ENST00000511767 DHFR2Q86XF0 187 aa13.93□□□□□ -0.18
PDLIM5-216ENST00000511767 ZDHHC21Q8IVQ6 265 aa13.93□□□□□ -0.18
PDLIM5-216ENST00000511767 LRRC18Q8N456 261 aa13.93□□□□□ -0.18
PDLIM5-216ENST00000511767 REG4Q9BYZ8 158 aa13.93□□□□□ -0.18
PDLIM5-216ENST00000511767 RNF121Q9H920 327 aa13.93□□□□□ -0.18
PDLIM5-216ENST00000511767 GRHPRQ9UBQ7 328 aa13.93□□□□□ -0.18
PDLIM5-216ENST00000511767 PRPF19Q9UMS4 504 aaKnown RBP13.93□□□□□ -0.18
PDLIM5-216ENST00000511767 AURKCQ9UQB9 309 aa13.93□□□□□ -0.18
PDLIM5-216ENST00000511767 SLC22A23A1A5C7 686 aa13.92□□□□□ -0.18
PDLIM5-216ENST00000511767 KRT36O76013 467 aa13.92□□□□□ -0.18
PDLIM5-216ENST00000511767 SCG5P05408 212 aa13.92□□□□□ -0.18
PDLIM5-216ENST00000511767 IGFBP1P08833 259 aaPredicted RBP13.92□□□□□ -0.18
PDLIM5-216ENST00000511767 RRM2P31350 389 aa13.92□□□□□ -0.18
PDLIM5-216ENST00000511767 EFNA4P52798 201 aa13.92□□□□□ -0.18
PDLIM5-216ENST00000511767 SPIBQ01892 262 aa13.92□□□□□ -0.18
PDLIM5-216ENST00000511767 RFX4Q33E94 735 aa13.92□□□□□ -0.18
PDLIM5-216ENST00000511767 MTX3Q5HYI7 312 aa13.92□□□□□ -0.18
PDLIM5-216ENST00000511767 LCN8Q6JVE9 175 aa13.92□□□□□ -0.18
PDLIM5-216ENST00000511767 KRT80Q6KB66 452 aa13.92□□□□□ -0.18
PDLIM5-216ENST00000511767 C1orf94Q6P1W5 598 aa13.92□□□□□ -0.18
PDLIM5-216ENST00000511767 DPY19L2P2Q6ZN68 376 aa13.92□□□□□ -0.18
PDLIM5-216ENST00000511767 CPEB3Q8NE35 698 aaKnown RBP13.92□□□□□ -0.18
PDLIM5-216ENST00000511767 RSRC1Q96IZ7 334 aaKnown RBP13.92□□□□□ -0.18
PDLIM5-216ENST00000511767 CLPTM1LQ96KA5 538 aa13.92□□□□□ -0.18
PDLIM5-216ENST00000511767 GPX7Q96SL4 187 aaPredicted RBP13.92□□□□□ -0.18
PDLIM5-216ENST00000511767 MUC13Q9H3R2 512 aa13.92□□□□□ -0.18
PDLIM5-216ENST00000511767 IL20RAQ9UHF4 553 aa13.92□□□□□ -0.18
PDLIM5-216ENST00000511767 SPEF1Q9Y4P9 236 aa13.92□□□□□ -0.18
PDLIM5-216ENST00000511767 IER3IP1Q9Y5U9 82 aa13.92□□□□□ -0.18
PDLIM5-216ENST00000511767 NF1P21359 2839 aa13.91□□□□□ -0.18
PDLIM5-216ENST00000511767 ABCA1O95477 2261 aa13.91□□□□□ -0.18
PDLIM5-216ENST00000511767 PRSS37A4D1T9 235 aa13.91□□□□□ -0.18
PDLIM5-216ENST00000511767 RNF223E7ERA6 249 aa13.91□□□□□ -0.18
PDLIM5-216ENST00000511767 ACOT8O14734 319 aa13.91□□□□□ -0.18
PDLIM5-216ENST00000511767 TXNDC12O95881 172 aa13.91□□□□□ -0.18
PDLIM5-216ENST00000511767 NR2C1P13056 603 aa13.91□□□□□ -0.18
PDLIM5-216ENST00000511767 LAP3P28838 519 aa13.91□□□□□ -0.18
PDLIM5-216ENST00000511767 MAGEA2P43356 314 aa13.91□□□□□ -0.18
PDLIM5-216ENST00000511767 GSSP48637 474 aa13.91□□□□□ -0.18
PDLIM5-216ENST00000511767 EVX1P49640 407 aa13.91□□□□□ -0.18
PDLIM5-216ENST00000511767 DSCR9P59020 149 aa13.91□□□□□ -0.18
PDLIM5-216ENST00000511767 SNTB2Q13425 540 aaKnown RBP13.91□□□□□ -0.18
PDLIM5-216ENST00000511767 MESTQ5EB52 335 aa13.91□□□□□ -0.18
PDLIM5-216ENST00000511767 GPR139Q6DWJ6 353 aa13.91□□□□□ -0.18
PDLIM5-216ENST00000511767 PGM2L1Q6PCE3 622 aa13.91□□□□□ -0.18
PDLIM5-216ENST00000511767 CLEC9AQ6UXN8 241 aa13.91□□□□□ -0.18
PDLIM5-216ENST00000511767 PAQR4Q8N4S7 273 aaPredicted RBP13.91□□□□□ -0.18
PDLIM5-216ENST00000511767 SLC30A7Q8NEW0 376 aa13.91□□□□□ -0.18
PDLIM5-216ENST00000511767 THTPAQ9BU02 230 aa13.91□□□□□ -0.18
PDLIM5-216ENST00000511767 KCNN2Q9H2S1 579 aa13.91□□□□□ -0.18
PDLIM5-216ENST00000511767 TMCC3Q9ULS5 477 aa13.91□□□□□ -0.18
PDLIM5-216ENST00000511767 CMAHPQ9Y471 501 aa13.91□□□□□ -0.18
PDLIM5-216ENST00000511767 H7C1C5 153 aa13.9□□□□□ -0.18
PDLIM5-216ENST00000511767 GPRIN2O60269 458 aa13.9□□□□□ -0.18
PDLIM5-216ENST00000511767 OR10H3O60404 316 aa13.9□□□□□ -0.18
PDLIM5-216ENST00000511767 LY6HO94772 140 aa13.9□□□□□ -0.18
PDLIM5-216ENST00000511767 UBOX5O94941 541 aa13.9□□□□□ -0.18
PDLIM5-216ENST00000511767 PTHP01270 115 aa13.9□□□□□ -0.18
PDLIM5-216ENST00000511767 CST2P09228 141 aa13.9□□□□□ -0.18
PDLIM5-216ENST00000511767 CCL2P13500 99 aa13.9□□□□□ -0.18
PDLIM5-216ENST00000511767 APEHP13798 732 aaKnown RBP13.9□□□□□ -0.18
PDLIM5-216ENST00000511767 ZNF32P17041 273 aa13.9□□□□□ -0.18
PDLIM5-216ENST00000511767 CDKN2AP42771 156 aaKnown RBP13.9□□□□□ -0.18
PDLIM5-216ENST00000511767 SNRPD2P62316 118 aaKnown RBP13.9□□□□□ -0.18
PDLIM5-216ENST00000511767 LCN6P62502 163 aa13.9□□□□□ -0.18
PDLIM5-216ENST00000511767 PSG4Q00888 419 aa13.9□□□□□ -0.18
PDLIM5-216ENST00000511767 PLP2Q04941 152 aa13.9□□□□□ -0.18
PDLIM5-216ENST00000511767 PABPC1L2AQ5JQF8 200 aa13.9□□□□□ -0.18
PDLIM5-216ENST00000511767 SMARCD3Q6STE5 483 aa13.9□□□□□ -0.18
PDLIM5-216ENST00000511767 Q71RC1 249 aaPredicted RBP13.9□□□□□ -0.18
PDLIM5-216ENST00000511767 ZCCHC24Q8N2G6 241 aaKnown RBP13.9□□□□□ -0.18
PDLIM5-216ENST00000511767 GNPDA2Q8TDQ7 276 aa13.9□□□□□ -0.18
PDLIM5-216ENST00000511767 SLC7A6OSQ96CW6 309 aaPredicted RBP13.9□□□□□ -0.18
PDLIM5-216ENST00000511767 RHNO1Q9BSD3 238 aa13.9□□□□□ -0.18
PDLIM5-216ENST00000511767 TRIM15Q9C019 465 aa13.9□□□□□ -0.18
PDLIM5-216ENST00000511767 MAGIXQ9H6Y5 334 aa13.9□□□□□ -0.18
PDLIM5-216ENST00000511767 KRCC1Q9NPI7 259 aaPredicted RBP13.9□□□□□ -0.18
PDLIM5-216ENST00000511767 VSX1Q9NZR4 365 aaPredicted RBP13.9□□□□□ -0.18
PDLIM5-216ENST00000511767 LYVE1Q9Y5Y7 322 aa13.9□□□□□ -0.18
PDLIM5-216ENST00000511767 NAV3Q8IVL0 2385 aa13.9□□□□□ -0.18
PDLIM5-216ENST00000511767 IGHV4-30-2A0A087WSY4 118 aa13.89□□□□□ -0.19
PDLIM5-216ENST00000511767 IQCMA0A1B0GVH7 501 aa13.89□□□□□ -0.19
PDLIM5-216ENST00000511767 FAM171A2A8MVW0 826 aa13.89□□□□□ -0.19
PDLIM5-216ENST00000511767 XKRYO14609 159 aa13.89□□□□□ -0.19
PDLIM5-216ENST00000511767 IMPA2O14732 288 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms