RNA–Protein interactions for RNA: ENST00000510626.5

HTT-208, Transcript of huntingtin, humanhuman

TSL 1 (best)

Gene HTT, Length 14,438 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-208ENST00000510626 NEURL2Q9BR09 285 aa7.73□□□□□ -1.17
HTT-208ENST00000510626 LIN7CQ9NUP9 197 aaKnown RBP7.73□□□□□ -1.17
HTT-208ENST00000510626 RARRES3Q9UL19 164 aa7.73□□□□□ -1.17
HTT-208ENST00000510626 SERINC4A6NH21 518 aa7.73□□□□□ -1.17
HTT-208ENST00000510626 LCATP04180 440 aa7.73□□□□□ -1.17
HTT-208ENST00000510626 HOXB5P09067 269 aa7.73□□□□□ -1.17
HTT-208ENST00000510626 SHC2P98077 582 aa7.73□□□□□ -1.17
HTT-208ENST00000510626 NAAAQ02083 359 aa7.73□□□□□ -1.17
HTT-208ENST00000510626 ZNF85Q03923 595 aa7.73□□□□□ -1.17
HTT-208ENST00000510626 SLC9A3R2Q15599 337 aa7.73□□□□□ -1.17
HTT-208ENST00000510626 DLEU7Q6UYE1 221 aa7.73□□□□□ -1.17
HTT-208ENST00000510626 MZB1Q8WU39 189 aa7.73□□□□□ -1.17
HTT-208ENST00000510626 LRP6O75581 1613 aa7.73□□□□□ -1.17
HTT-208ENST00000510626 F5H5K5 113 aa7.73□□□□□ -1.17
HTT-208ENST00000510626 CCNOP22674 350 aa7.73□□□□□ -1.17
HTT-208ENST00000510626 NPBWR1P48145 328 aa7.73□□□□□ -1.17
HTT-208ENST00000510626 SLC5A12Q1EHB4 618 aa7.73□□□□□ -1.17
HTT-208ENST00000510626 LRRC73Q5JTD7 316 aa7.73□□□□□ -1.17
HTT-208ENST00000510626 PLXDC2Q6UX71 529 aa7.73□□□□□ -1.17
HTT-208ENST00000510626 OR5K2Q8NHB8 316 aa7.73□□□□□ -1.17
HTT-208ENST00000510626 GPR55Q9Y2T6 319 aaPredicted RBP7.73□□□□□ -1.17
HTT-208ENST00000510626 USP3Q9Y6I4 520 aa7.73□□□□□ -1.17
HTT-208ENST00000510626 ZNF593O00488 134 aaPredicted RBP7.73□□□□□ -1.17
HTT-208ENST00000510626 IL2RGP31785 369 aa7.73□□□□□ -1.17
HTT-208ENST00000510626 BET1LQ9NYM9 111 aa7.73□□□□□ -1.17
HTT-208ENST00000510626 GDE1Q9NZC3 331 aa7.73□□□□□ -1.17
HTT-208ENST00000510626 BTF3P20290 206 aaKnown RBP7.73□□□□□ -1.17
HTT-208ENST00000510626 ITGB8P26012 769 aa7.73□□□□□ -1.17
HTT-208ENST00000510626 EXOSC2Q13868 293 aaKnown RBP7.73□□□□□ -1.17
HTT-208ENST00000510626 VAMP8Q9BV40 100 aa7.73□□□□□ -1.17
HTT-208ENST00000510626 RNF19AQ9NV58 838 aa7.73□□□□□ -1.17
HTT-208ENST00000510626 PQLC2LA1A4F0 135 aa7.73□□□□□ -1.17
HTT-208ENST00000510626 PRAMEF27A3QJZ7 478 aa7.73□□□□□ -1.17
HTT-208ENST00000510626 TMEM235A6NFC5 223 aa7.73□□□□□ -1.17
HTT-208ENST00000510626 AP4M1O00189 453 aa7.73□□□□□ -1.17
HTT-208ENST00000510626 ABCD4O14678 606 aa7.73□□□□□ -1.17
HTT-208ENST00000510626 SLC10A1Q14973 349 aa7.73□□□□□ -1.17
HTT-208ENST00000510626 PRAMEF9Q5VWM5 478 aa7.73□□□□□ -1.17
HTT-208ENST00000510626 HGDQ93099 445 aa7.73□□□□□ -1.17
HTT-208ENST00000510626 LINC00862A6NCI5 91 aa7.72□□□□□ -1.17
HTT-208ENST00000510626 ANKRD61A6NGH8 418 aa7.72□□□□□ -1.17
HTT-208ENST00000510626 PCSK6P29122 969 aa7.72□□□□□ -1.17
HTT-208ENST00000510626 IDUAP35475 653 aa7.72□□□□□ -1.17
HTT-208ENST00000510626 GDI1P31150 447 aa7.72□□□□□ -1.17
HTT-208ENST00000510626 FAHD1Q6P587 224 aa7.72□□□□□ -1.17
HTT-208ENST00000510626 PBX4Q9BYU1 374 aa7.72□□□□□ -1.17
HTT-208ENST00000510626 PITPNC1Q9UKF7 332 aa7.72□□□□□ -1.17
HTT-208ENST00000510626 B4DGG1 531 aa7.72□□□□□ -1.17
HTT-208ENST00000510626 CIDEAO60543 219 aa7.72□□□□□ -1.17
HTT-208ENST00000510626 ADIRFQ15847 76 aa7.72□□□□□ -1.17
HTT-208ENST00000510626 NLRC3Q7RTR2 1065 aa7.72□□□□□ -1.17
HTT-208ENST00000510626 IGSF21Q96ID5 467 aa7.72□□□□□ -1.17
HTT-208ENST00000510626 TMEM204Q9BSN7 226 aa7.72□□□□□ -1.17
HTT-208ENST00000510626 ZNF264O43296 627 aa7.72□□□□□ -1.17
HTT-208ENST00000510626 DEDDO75618 318 aa7.72□□□□□ -1.17
HTT-208ENST00000510626 BAXQ07812 192 aa7.72□□□□□ -1.17
HTT-208ENST00000510626 VASNQ6EMK4 673 aa7.72□□□□□ -1.17
HTT-208ENST00000510626 OR8U1Q8NH10 309 aa7.72□□□□□ -1.17
HTT-208ENST00000510626 FLVCR2Q9UPI3 526 aa7.72□□□□□ -1.17
HTT-208ENST00000510626 ZNFX1Q9P2E3 1918 aaKnown RBP7.72□□□□□ -1.17
HTT-208ENST00000510626 A0A1B0GTW7 788 aa7.72□□□□□ -1.17
HTT-208ENST00000510626 SULT2B1O00204 365 aa7.72□□□□□ -1.17
HTT-208ENST00000510626 GPR75O95800 540 aa7.72□□□□□ -1.17
HTT-208ENST00000510626 GNB3P16520 340 aa7.72□□□□□ -1.17
HTT-208ENST00000510626 BSGP35613 385 aa7.72□□□□□ -1.17
HTT-208ENST00000510626 CYB561A3Q8NBI2 242 aa7.72□□□□□ -1.17
HTT-208ENST00000510626 SELENOIQ9C0D9 397 aa7.72□□□□□ -1.17
HTT-208ENST00000510626 CYSLTR2Q9NS75 346 aa7.72□□□□□ -1.17
HTT-208ENST00000510626 MRPS28Q9Y2Q9 187 aaKnown RBP7.72□□□□□ -1.17
HTT-208ENST00000510626 SEC13P55735 322 aa7.72□□□□□ -1.17
HTT-208ENST00000510626 SLC35G1Q2M3R5 365 aa7.72□□□□□ -1.17
HTT-208ENST00000510626 RIPPLY2Q5TAB7 128 aa7.72□□□□□ -1.17
HTT-208ENST00000510626 FAM3BP58499 235 aaPredicted RBP7.72□□□□□ -1.17
HTT-208ENST00000510626 ZNF90Q03938 601 aa7.72□□□□□ -1.17
HTT-208ENST00000510626 EGR3Q06889 387 aa7.72□□□□□ -1.17
HTT-208ENST00000510626 FOXJ1Q92949 421 aa7.72□□□□□ -1.17
HTT-208ENST00000510626 DTD2Q96FN9 168 aa7.72□□□□□ -1.17
HTT-208ENST00000510626 SMIM3Q9BZL3 60 aa7.72□□□□□ -1.17
HTT-208ENST00000510626 TMEM189-UBE2V1I3L0A0 370 aa7.72□□□□□ -1.17
HTT-208ENST00000510626 ZNF28P17035 718 aa7.72□□□□□ -1.17
HTT-208ENST00000510626 NKX2-1P43699 371 aaPredicted RBP7.72□□□□□ -1.17
HTT-208ENST00000510626 FOXB2Q5VYV0 432 aa7.72□□□□□ -1.17
HTT-208ENST00000510626 NPSR1Q6W5P4 371 aa7.72□□□□□ -1.17
HTT-208ENST00000510626 NKX2-4Q9H2Z4 354 aa7.72□□□□□ -1.17
HTT-208ENST00000510626 PLEK2Q9NYT0 353 aa7.72□□□□□ -1.17
HTT-208ENST00000510626 SLC23A2Q9UGH3 650 aa7.72□□□□□ -1.17
HTT-208ENST00000510626 IL20RAQ9UHF4 553 aa7.72□□□□□ -1.17
HTT-208ENST00000510626 AK3Q9UIJ7 227 aa7.72□□□□□ -1.17
HTT-208ENST00000510626 NXT1Q9UKK6 140 aaKnown RBP7.72□□□□□ -1.17
HTT-208ENST00000510626 MPPED1O15442 326 aa7.72□□□□□ -1.17
HTT-208ENST00000510626 HOXB2P14652 356 aa7.72□□□□□ -1.17
HTT-208ENST00000510626 ACKR3P25106 362 aa7.72□□□□□ -1.17
HTT-208ENST00000510626 OR2B8PP59922 312 aa7.72□□□□□ -1.17
HTT-208ENST00000510626 MAT1AQ00266 395 aaKnown RBP7.72□□□□□ -1.17
HTT-208ENST00000510626 ZDHHC22Q8N966 263 aa7.72□□□□□ -1.17
HTT-208ENST00000510626 SLC25A43Q8WUT9 341 aaPredicted RBP7.72□□□□□ -1.17
HTT-208ENST00000510626 C2orf50Q96LR7 162 aa7.72□□□□□ -1.17
HTT-208ENST00000510626 hCG_1809904A0A1W2PP81 198 aa7.72□□□□□ -1.17
HTT-208ENST00000510626 A0A1W2PPE2 198 aa7.72□□□□□ -1.17
HTT-208ENST00000510626 A0A1W2PR64 198 aa7.72□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms