RNA–Protein interactions for RNA: ENST00000510569.5

NUP54-209, Transcript of nucleoporin 54, humanhuman

TSL 5

Gene NUP54, Length 494 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-209ENST00000510569 ZSCAN12O43309 604 aa3.05□□□□□ -1.92
NUP54-209ENST00000510569 GPX5O75715 221 aa3.05□□□□□ -1.92
NUP54-209ENST00000510569 NEBLO76041 1014 aa3.05□□□□□ -1.92
NUP54-209ENST00000510569 RAB3DO95716 219 aa3.05□□□□□ -1.92
NUP54-209ENST00000510569 IFNA6P05013 189 aa3.05□□□□□ -1.92
NUP54-209ENST00000510569 CHRNGP07510 517 aa3.05□□□□□ -1.92
NUP54-209ENST00000510569 CD3GP09693 182 aa3.05□□□□□ -1.92
NUP54-209ENST00000510569 CTXN2P0C2S0 81 aa3.05□□□□□ -1.92
NUP54-209ENST00000510569 SLC35E2BP0CK96 405 aa3.05□□□□□ -1.92
NUP54-209ENST00000510569 HSMCR30P0CW71 290 aa3.05□□□□□ -1.92
NUP54-209ENST00000510569 B4GALT1P15291 398 aa3.05□□□□□ -1.92
NUP54-209ENST00000510569 TNNI1P19237 187 aa3.05□□□□□ -1.92
NUP54-209ENST00000510569 EIF2S2P20042 333 aaKnown RBP3.05□□□□□ -1.92
NUP54-209ENST00000510569 PRPS1L1P21108 318 aa3.05□□□□□ -1.92
NUP54-209ENST00000510569 ACTR1BP42025 376 aa3.05□□□□□ -1.92
NUP54-209ENST00000510569 PLK1P53350 603 aa3.05□□□□□ -1.92
NUP54-209ENST00000510569 RPL10AP62906 217 aaKnown RBP3.05□□□□□ -1.92
NUP54-209ENST00000510569 REEP5Q00765 189 aa3.05□□□□□ -1.92
NUP54-209ENST00000510569 CYP24A1Q07973 514 aa3.05□□□□□ -1.92
NUP54-209ENST00000510569 ILKQ13418 452 aa3.05□□□□□ -1.92
NUP54-209ENST00000510569 MSLNQ13421 630 aaPredicted RBP3.05□□□□□ -1.92
NUP54-209ENST00000510569 ITIH4Q14624 930 aa3.05□□□□□ -1.92
NUP54-209ENST00000510569 MESDQ14696 234 aa3.05□□□□□ -1.92
NUP54-209ENST00000510569 SLC22A10Q63ZE4 541 aa3.05□□□□□ -1.92
NUP54-209ENST00000510569 HIST2H2AA3Q6FI13 130 aa3.05□□□□□ -1.92
NUP54-209ENST00000510569 LRRC74BQ6ZQY2 392 aa3.05□□□□□ -1.92
NUP54-209ENST00000510569 Q6ZRG5 221 aa3.05□□□□□ -1.92
NUP54-209ENST00000510569 MRPL21Q7Z2W9 205 aaKnown RBP3.05□□□□□ -1.92
NUP54-209ENST00000510569 PID1Q7Z2X4 250 aa3.05□□□□□ -1.92
NUP54-209ENST00000510569 MFSD6LQ8IWD5 586 aa3.05□□□□□ -1.92
NUP54-209ENST00000510569 MCOLN2Q8IZK6 566 aa3.05□□□□□ -1.92
NUP54-209ENST00000510569 CYB561A3Q8NBI2 242 aa3.05□□□□□ -1.92
NUP54-209ENST00000510569 NECAP1Q8NC96 275 aa3.05□□□□□ -1.92
NUP54-209ENST00000510569 OR2L3Q8NG85 312 aa3.05□□□□□ -1.92
NUP54-209ENST00000510569 UBTD2Q8WUN7 234 aa3.05□□□□□ -1.92
NUP54-209ENST00000510569 LHX4Q969G2 390 aa3.05□□□□□ -1.92
NUP54-209ENST00000510569 GLYATL1Q969I3 302 aa3.05□□□□□ -1.92
NUP54-209ENST00000510569 C16orf74Q96GX8 76 aa3.05□□□□□ -1.92
NUP54-209ENST00000510569 C9orf72Q96LT7 481 aa3.05□□□□□ -1.92
NUP54-209ENST00000510569 VSTM2LQ96N03 204 aa3.05□□□□□ -1.92
NUP54-209ENST00000510569 TGM7Q96PF1 710 aa3.05□□□□□ -1.92
NUP54-209ENST00000510569 CIB1Q99828 191 aa3.05□□□□□ -1.92
NUP54-209ENST00000510569 C7orf50Q9BRJ6 194 aaKnown RBP3.05□□□□□ -1.92
NUP54-209ENST00000510569 MED10Q9BTT4 135 aa3.05□□□□□ -1.92
NUP54-209ENST00000510569 C6orf62Q9GZU0 229 aaPredicted RBP3.05□□□□□ -1.92
NUP54-209ENST00000510569 LRRN3Q9H3W5 708 aa3.05□□□□□ -1.92
NUP54-209ENST00000510569 NARFLQ9H6Q4 476 aa3.05□□□□□ -1.92
NUP54-209ENST00000510569 DCLRE1BQ9H816 532 aa3.05□□□□□ -1.92
NUP54-209ENST00000510569 ADAP2Q9NPF8 381 aa3.05□□□□□ -1.92
NUP54-209ENST00000510569 IMP3Q9NV31 184 aaKnown RBP3.05□□□□□ -1.92
NUP54-209ENST00000510569 NARFQ9UHQ1 456 aa3.05□□□□□ -1.92
NUP54-209ENST00000510569 PHF11Q9UIL8 331 aa3.05□□□□□ -1.92
NUP54-209ENST00000510569 RPH3ALQ9UNE2 315 aa3.05□□□□□ -1.92
NUP54-209ENST00000510569 WDR45Q9Y484 360 aa3.05□□□□□ -1.92
NUP54-209ENST00000510569 ATG4BQ9Y4P1 393 aa3.05□□□□□ -1.92
NUP54-209ENST00000510569 CACNG2Q9Y698 323 aa3.05□□□□□ -1.92
NUP54-209ENST00000510569 TCHHQ07283 1943 aa3.05□□□□□ -1.92
NUP54-209ENST00000510569 BRWD3Q6RI45 1802 aa3.05□□□□□ -1.92
NUP54-209ENST00000510569 RGPD8O14715 1765 aaPredicted RBP3.05□□□□□ -1.92
NUP54-209ENST00000510569 SIPA1L3O60292 1781 aaPredicted RBP3.05□□□□□ -1.92
NUP54-209ENST00000510569 METP08581 1390 aa3.04□□□□□ -1.92
NUP54-209ENST00000510569 TMEM213A2RRL7 107 aa3.04□□□□□ -1.92
NUP54-209ENST00000510569 TRABD2BA6NFA1 517 aa3.04□□□□□ -1.92
NUP54-209ENST00000510569 TEX46H3BTG2 121 aa3.04□□□□□ -1.92
NUP54-209ENST00000510569 BTN3A3O00478 584 aa3.04□□□□□ -1.92
NUP54-209ENST00000510569 TOX3O15405 576 aaPredicted RBP3.04□□□□□ -1.92
NUP54-209ENST00000510569 EMC8O43402 210 aa3.04□□□□□ -1.92
NUP54-209ENST00000510569 LATO43561 262 aa3.04□□□□□ -1.92
NUP54-209ENST00000510569 SERF1AO75920 110 aa3.04□□□□□ -1.92
NUP54-209ENST00000510569 FADS2O95864 444 aaKnown RBP3.04□□□□□ -1.92
NUP54-209ENST00000510569 CST4P01036 141 aa3.04□□□□□ -1.92
NUP54-209ENST00000510569 SERPINE2P07093 398 aa3.04□□□□□ -1.92
NUP54-209ENST00000510569 DCNP07585 359 aaKnown RBP3.04□□□□□ -1.92
NUP54-209ENST00000510569 NUDT17P0C025 328 aa3.04□□□□□ -1.92
NUP54-209ENST00000510569 ATF6P18850 670 aa3.04□□□□□ -1.92
NUP54-209ENST00000510569 MMP11P24347 488 aa3.04□□□□□ -1.92
NUP54-209ENST00000510569 ALDH3A1P30838 453 aa3.04□□□□□ -1.92
NUP54-209ENST00000510569 CRYBB2P43320 205 aa3.04□□□□□ -1.92
NUP54-209ENST00000510569 ACTBP60709 375 aa3.04□□□□□ -1.92
NUP54-209ENST00000510569 RAB4BP61018 213 aa3.04□□□□□ -1.92
NUP54-209ENST00000510569 ACTA2P62736 377 aa3.04□□□□□ -1.92
NUP54-209ENST00000510569 ACTG1P63261 375 aa3.04□□□□□ -1.92
NUP54-209ENST00000510569 ACTG2P63267 376 aa3.04□□□□□ -1.92
NUP54-209ENST00000510569 ACTC1P68032 377 aa3.04□□□□□ -1.92
NUP54-209ENST00000510569 ACTA1P68133 377 aa3.04□□□□□ -1.92
NUP54-209ENST00000510569 TSPAN31Q12999 210 aa3.04□□□□□ -1.92
NUP54-209ENST00000510569 NME3Q13232 169 aa3.04□□□□□ -1.92
NUP54-209ENST00000510569 GANABQ14697 944 aaKnown RBP3.04□□□□□ -1.92
NUP54-209ENST00000510569 SPHARQ15513 63 aa3.04□□□□□ -1.92
NUP54-209ENST00000510569 ZSWIM7Q19AV6 140 aa3.04□□□□□ -1.92
NUP54-209ENST00000510569 TCHHL1Q5QJ38 904 aaPredicted RBP3.04□□□□□ -1.92
NUP54-209ENST00000510569 LIPNQ5VXI9 398 aa3.04□□□□□ -1.92
NUP54-209ENST00000510569 OR4F3Q6IEY1 312 aa3.04□□□□□ -1.92
NUP54-209ENST00000510569 OR2A2Q6IF42 318 aa3.04□□□□□ -1.92
NUP54-209ENST00000510569 MOB2Q70IA6 237 aa3.04□□□□□ -1.92
NUP54-209ENST00000510569 SLC51BQ86UW2 128 aa3.04□□□□□ -1.92
NUP54-209ENST00000510569 TMEM123Q8N131 208 aa3.04□□□□□ -1.92
NUP54-209ENST00000510569 FBXO36Q8NEA4 188 aa3.04□□□□□ -1.92
NUP54-209ENST00000510569 OR9G4Q8NGQ1 327 aa3.04□□□□□ -1.92
NUP54-209ENST00000510569 OR1L4Q8NGR5 311 aa3.04□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms