RNA–Protein interactions for RNA: ENST00000510377.5

USP38-202, Transcript of ubiquitin specific peptidase 38, humanhuman

TSL 1 (best) BASIC

Gene USP38, Length 4,135 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP38-202ENST00000510377 PIAS3Q9Y6X2 628 aa13.55□□□□□ -0.24
USP38-202ENST00000510377 ST6GAL1P15907 406 aa13.55□□□□□ -0.24
USP38-202ENST00000510377 PI3P19957 117 aa13.55□□□□□ -0.24
USP38-202ENST00000510377 PGCP20142 388 aa13.55□□□□□ -0.24
USP38-202ENST00000510377 SLC35D3Q5M8T2 416 aa13.55□□□□□ -0.24
USP38-202ENST00000510377 TMEM52Q8NDY8 209 aa13.55□□□□□ -0.24
USP38-202ENST00000510377 CHST6Q9GZX3 395 aa13.55□□□□□ -0.24
USP38-202ENST00000510377 GLSO94925 669 aaPredicted RBP13.54□□□□□ -0.24
USP38-202ENST00000510377 NANOS3P60323 173 aaKnown RBP13.54□□□□□ -0.24
USP38-202ENST00000510377 GLO1Q04760 184 aa13.54□□□□□ -0.24
USP38-202ENST00000510377 TMEM255AQ5JRV8 349 aa13.54□□□□□ -0.24
USP38-202ENST00000510377 EIF5AL1Q6IS14 154 aaKnown RBP13.54□□□□□ -0.24
USP38-202ENST00000510377 ZNF283Q8N7M2 679 aa13.54□□□□□ -0.24
USP38-202ENST00000510377 OR4D10Q8NGI6 311 aa13.54□□□□□ -0.24
USP38-202ENST00000510377 C16orf52Q8NHV5 167 aa13.54□□□□□ -0.24
USP38-202ENST00000510377 SLC37A2Q8TED4 501 aa13.54□□□□□ -0.24
USP38-202ENST00000510377 NUDCD2Q8WVJ2 157 aa13.54□□□□□ -0.24
USP38-202ENST00000510377 ATPIF1Q9UII2 106 aa13.54□□□□□ -0.24
USP38-202ENST00000510377 CD207Q9UJ71 328 aa13.54□□□□□ -0.24
USP38-202ENST00000510377 CXorf51AA0A1B0GTR3 108 aa13.54□□□□□ -0.24
USP38-202ENST00000510377 HRKO00198 91 aa13.54□□□□□ -0.24
USP38-202ENST00000510377 PHYHO14832 338 aa13.54□□□□□ -0.24
USP38-202ENST00000510377 GALR3O60755 368 aaPredicted RBP13.54□□□□□ -0.24
USP38-202ENST00000510377 PEBP1P30086 187 aaKnown RBP13.54□□□□□ -0.24
USP38-202ENST00000510377 RORAP35398 523 aa13.54□□□□□ -0.24
USP38-202ENST00000510377 THBS2P35442 1172 aa13.54□□□□□ -0.24
USP38-202ENST00000510377 PPP1CAP62136 330 aa13.54□□□□□ -0.24
USP38-202ENST00000510377 ZP2Q05996 745 aa13.54□□□□□ -0.24
USP38-202ENST00000510377 ZNF626Q68DY1 528 aa13.54□□□□□ -0.24
USP38-202ENST00000510377 CORO6Q6QEF8 472 aa13.54□□□□□ -0.24
USP38-202ENST00000510377 OR51A4Q8NGJ6 313 aa13.54□□□□□ -0.24
USP38-202ENST00000510377 RNASE11Q8TAA1 199 aaKnown RBP13.54□□□□□ -0.24
USP38-202ENST00000510377 TMED6Q8WW62 240 aa13.54□□□□□ -0.24
USP38-202ENST00000510377 PMM1Q92871 262 aa13.54□□□□□ -0.24
USP38-202ENST00000510377 PPP1R14AQ96A00 147 aa13.54□□□□□ -0.24
USP38-202ENST00000510377 PARP12Q9H0J9 701 aaKnown RBP13.54□□□□□ -0.24
USP38-202ENST00000510377 MOKQ9UQ07 419 aa13.54□□□□□ -0.24
USP38-202ENST00000510377 ASXL3Q9C0F0 2248 aa13.54□□□□□ -0.24
USP38-202ENST00000510377 TRAV8-7A0A075B6U6 113 aa13.54□□□□□ -0.24
USP38-202ENST00000510377 EFCAB7A8K855 629 aa13.54□□□□□ -0.24
USP38-202ENST00000510377 PMS2P2O95744 297 aa13.54□□□□□ -0.24
USP38-202ENST00000510377 PMP2P02689 132 aa13.54□□□□□ -0.24
USP38-202ENST00000510377 THEGLP0DJG4 465 aa13.54□□□□□ -0.24
USP38-202ENST00000510377 AVPR2P30518 371 aa13.54□□□□□ -0.24
USP38-202ENST00000510377 SNRPNP63162 240 aaKnown RBP13.54□□□□□ -0.24
USP38-202ENST00000510377 SLC22A6Q4U2R8 563 aa13.54□□□□□ -0.24
USP38-202ENST00000510377 CLVS2Q5SYC1 327 aa13.54□□□□□ -0.24
USP38-202ENST00000510377 SEZ6L2Q6UXD5 910 aa13.54□□□□□ -0.24
USP38-202ENST00000510377 CA13Q8N1Q1 262 aa13.54□□□□□ -0.24
USP38-202ENST00000510377 OR5D18Q8NGL1 313 aa13.54□□□□□ -0.24
USP38-202ENST00000510377 OR2A5Q96R48 311 aa13.54□□□□□ -0.24
USP38-202ENST00000510377 PRRT1Q99946 306 aa13.54□□□□□ -0.24
USP38-202ENST00000510377 DNAJB12Q9NXW2 375 aaKnown RBP13.54□□□□□ -0.24
USP38-202ENST00000510377 KLRF1Q9NZS2 232 aa13.54□□□□□ -0.24
USP38-202ENST00000510377 PCDHGA9Q9Y5G4 932 aaKnown RBP13.54□□□□□ -0.24
USP38-202ENST00000510377 ANKRD20A5PA0PJZ0 165 aa13.54□□□□□ -0.24
USP38-202ENST00000510377 OGG1O15527 345 aa13.54□□□□□ -0.24
USP38-202ENST00000510377 RBMXP38159 391 aaKnown RBP13.54□□□□□ -0.24
USP38-202ENST00000510377 RIN1Q13671 783 aa13.54□□□□□ -0.24
USP38-202ENST00000510377 SVBPQ8N300 66 aa13.54□□□□□ -0.24
USP38-202ENST00000510377 BCORP1Q8N888 145 aa13.54□□□□□ -0.24
USP38-202ENST00000510377 HGDQ93099 445 aa13.54□□□□□ -0.24
USP38-202ENST00000510377 ZNF75AQ96N20 296 aa13.54□□□□□ -0.24
USP38-202ENST00000510377 PELOQ9BRX2 385 aaKnown RBP13.54□□□□□ -0.24
USP38-202ENST00000510377 LYRM4Q9HD34 91 aa13.54□□□□□ -0.24
USP38-202ENST00000510377 KCNE5Q9UJ90 142 aa13.54□□□□□ -0.24
USP38-202ENST00000510377 MEMO1Q9Y316 297 aa13.54□□□□□ -0.24
USP38-202ENST00000510377 NLRC5Q86WI3 1866 aa13.53□□□□□ -0.24
USP38-202ENST00000510377 MEGF11A6BM72 1044 aa13.53□□□□□ -0.24
USP38-202ENST00000510377 CFIP05156 583 aa13.53□□□□□ -0.24
USP38-202ENST00000510377 ZNF14P17017 642 aaPredicted RBP13.53□□□□□ -0.24
USP38-202ENST00000510377 BTCP35070 178 aa13.53□□□□□ -0.24
USP38-202ENST00000510377 BLKP51451 505 aa13.53□□□□□ -0.24
USP38-202ENST00000510377 ZP1P60852 638 aa13.53□□□□□ -0.24
USP38-202ENST00000510377 DCAF12L2Q5VW00 463 aa13.53□□□□□ -0.24
USP38-202ENST00000510377 KLHDC7BQ96G42 594 aa13.53□□□□□ -0.24
USP38-202ENST00000510377 MOGAT1Q96PD6 335 aa13.53□□□□□ -0.24
USP38-202ENST00000510377 SOSTQ9BQB4 213 aa13.53□□□□□ -0.24
USP38-202ENST00000510377 GPR160Q9UJ42 338 aa13.53□□□□□ -0.24
USP38-202ENST00000510377 XRCC3O43542 346 aa13.53□□□□□ -0.24
USP38-202ENST00000510377 UTS2O95399 124 aa13.53□□□□□ -0.24
USP38-202ENST00000510377 SLC2A1P11166 492 aa13.53□□□□□ -0.24
USP38-202ENST00000510377 TPT1P13693 172 aaKnown RBP13.53□□□□□ -0.24
USP38-202ENST00000510377 CBR1P16152 277 aa13.53□□□□□ -0.24
USP38-202ENST00000510377 EPHA4P54764 986 aa13.53□□□□□ -0.24
USP38-202ENST00000510377 TDGQ13569 410 aa13.53□□□□□ -0.24
USP38-202ENST00000510377 ZNF425Q6IV72 752 aa13.53□□□□□ -0.24
USP38-202ENST00000510377 H3F3CQ6NXT2 135 aa13.53□□□□□ -0.24
USP38-202ENST00000510377 PXKQ7Z7A4 578 aa13.53□□□□□ -0.24
USP38-202ENST00000510377 SFTPA2Q8IWL1 248 aa13.53□□□□□ -0.24
USP38-202ENST00000510377 PPP1R1CQ8WVI7 109 aa13.53□□□□□ -0.24
USP38-202ENST00000510377 RLN3Q8WXF3 142 aa13.53□□□□□ -0.24
USP38-202ENST00000510377 FGGYQ96C11 551 aa13.53□□□□□ -0.24
USP38-202ENST00000510377 JSRP1Q96MG2 331 aaPredicted RBP13.53□□□□□ -0.24
USP38-202ENST00000510377 MAP3K3Q99759 626 aa13.53□□□□□ -0.24
USP38-202ENST00000510377 CRTAPO75718 401 aaPredicted RBP13.53□□□□□ -0.24
USP38-202ENST00000510377 ERCC1P07992 297 aaPredicted RBP13.53□□□□□ -0.24
USP38-202ENST00000510377 SDHAP31040 664 aa13.53□□□□□ -0.24
USP38-202ENST00000510377 EFNB2P52799 333 aa13.53□□□□□ -0.24
USP38-202ENST00000510377 EMP2P54851 167 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms