RNA–Protein interactions for RNA: ENST00000509769.5

USP53-205, Transcript of ubiquitin specific peptidase 53, humanhuman

TSL 1 (best)

Gene USP53, Length 4,803 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-205ENST00000509769 COL5A3P25940 1745 aaPredicted RBP3.31□□□□□ -1.88
USP53-205ENST00000509769 AK9Q5TCS8 1911 aa3.31□□□□□ -1.88
USP53-205ENST00000509769 A0A0B4J2A0 478 aa3.31□□□□□ -1.88
USP53-205ENST00000509769 LOC102723532A0A0G2JNH3 316 aa3.31□□□□□ -1.88
USP53-205ENST00000509769 KIR2DS1A0A191URI9 304 aa3.31□□□□□ -1.88
USP53-205ENST00000509769 A0A1W2PRV1 198 aa3.31□□□□□ -1.88
USP53-205ENST00000509769 ANKRD20A5PA0PJZ0 165 aa3.31□□□□□ -1.88
USP53-205ENST00000509769 TMEM8BA6NDV4 472 aa3.31□□□□□ -1.88
USP53-205ENST00000509769 POM121BA6NF01 834 aa3.31□□□□□ -1.88
USP53-205ENST00000509769 A6NIN4 97 aa3.31□□□□□ -1.88
USP53-205ENST00000509769 CPSF4LA6NMK7 179 aaKnown RBP3.31□□□□□ -1.88
USP53-205ENST00000509769 GSG1L2A8MUP6 293 aa3.31□□□□□ -1.88
USP53-205ENST00000509769 LEUTXA8MZ59 168 aa3.31□□□□□ -1.88
USP53-205ENST00000509769 SCDO00767 359 aa3.31□□□□□ -1.88
USP53-205ENST00000509769 HSD17B6O14756 317 aa3.31□□□□□ -1.88
USP53-205ENST00000509769 AGPAT2O15120 278 aa3.31□□□□□ -1.88
USP53-205ENST00000509769 LILRB3O75022 631 aa3.31□□□□□ -1.88
USP53-205ENST00000509769 NDUFB2O95178 105 aa3.31□□□□□ -1.88
USP53-205ENST00000509769 SEMA4FO95754 770 aa3.31□□□□□ -1.88
USP53-205ENST00000509769 TXNDC12O95881 172 aa3.31□□□□□ -1.88
USP53-205ENST00000509769 LRG1P02750 347 aa3.31□□□□□ -1.88
USP53-205ENST00000509769 ADRA2AP08913 450 aa3.31□□□□□ -1.88
USP53-205ENST00000509769 CBR1P16152 277 aa3.31□□□□□ -1.88
USP53-205ENST00000509769 AMD1P17707 334 aa3.31□□□□□ -1.88
USP53-205ENST00000509769 FPR3P25089 353 aa3.31□□□□□ -1.88
USP53-205ENST00000509769 FCER1GP30273 86 aa3.31□□□□□ -1.88
USP53-205ENST00000509769 KIR2DS4P43632 304 aa3.31□□□□□ -1.88
USP53-205ENST00000509769 NPBWR1P48145 328 aa3.31□□□□□ -1.88
USP53-205ENST00000509769 OAZ1P54368 228 aa3.31□□□□□ -1.88
USP53-205ENST00000509769 RAC1P63000 192 aa3.31□□□□□ -1.88
USP53-205ENST00000509769 FPGSQ05932 587 aa3.31□□□□□ -1.88
USP53-205ENST00000509769 PMS2P11Q13670 270 aa3.31□□□□□ -1.88
USP53-205ENST00000509769 ZNF273Q14593 569 aa3.31□□□□□ -1.88
USP53-205ENST00000509769 KIR2DS1Q14954 304 aa3.31□□□□□ -1.88
USP53-205ENST00000509769 UBE2V2Q15819 145 aa3.31□□□□□ -1.88
USP53-205ENST00000509769 GAB4Q2WGN9 574 aa3.31□□□□□ -1.88
USP53-205ENST00000509769 RAB6CQ53S08 254 aa3.31□□□□□ -1.88
USP53-205ENST00000509769 VWA2Q5GFL6 755 aa3.31□□□□□ -1.88
USP53-205ENST00000509769 NKAIN2Q5VXU1 208 aa3.31□□□□□ -1.88
USP53-205ENST00000509769 MFSD14CQ5VZR4 134 aa3.31□□□□□ -1.88
USP53-205ENST00000509769 ZNF787Q6DD87 383 aa3.31□□□□□ -1.88
USP53-205ENST00000509769 OR7E24Q6IFN5 339 aa3.31□□□□□ -1.88
USP53-205ENST00000509769 JMJD6Q6NYC1 403 aaPredicted RBP3.31□□□□□ -1.88
USP53-205ENST00000509769 TMEM220Q6QAJ8 160 aa3.31□□□□□ -1.88
USP53-205ENST00000509769 TXNRD3Q86VQ6 643 aa3.31□□□□□ -1.88
USP53-205ENST00000509769 OR51G2Q8NGK0 314 aa3.31□□□□□ -1.88
USP53-205ENST00000509769 SPPL2BQ8TCT7 592 aa3.31□□□□□ -1.88
USP53-205ENST00000509769 THEM6Q8WUY1 208 aa3.31□□□□□ -1.88
USP53-205ENST00000509769 NUDCD2Q8WVJ2 157 aa3.31□□□□□ -1.88
USP53-205ENST00000509769 GCDHQ92947 438 aaPredicted RBP3.31□□□□□ -1.88
USP53-205ENST00000509769 MEGF10Q96KG7 1140 aa3.31□□□□□ -1.88
USP53-205ENST00000509769 HRASLS5Q96KN8 279 aa3.31□□□□□ -1.88
USP53-205ENST00000509769 DOK1Q99704 481 aa3.31□□□□□ -1.88
USP53-205ENST00000509769 ACO2Q99798 780 aaKnown RBP3.31□□□□□ -1.88
USP53-205ENST00000509769 INPP5KQ9BT40 448 aa3.31□□□□□ -1.88
USP53-205ENST00000509769 ALOXE3Q9BYJ1 711 aa3.31□□□□□ -1.88
USP53-205ENST00000509769 ADGRL4Q9HBW9 690 aa3.31□□□□□ -1.88
USP53-205ENST00000509769 DCAF13Q9NV06 445 aaKnown RBP3.31□□□□□ -1.88
USP53-205ENST00000509769 NECAP2Q9NVZ3 263 aa3.31□□□□□ -1.88
USP53-205ENST00000509769 HIF1ANQ9NWT6 349 aa3.31□□□□□ -1.88
USP53-205ENST00000509769 SHPKQ9UHJ6 478 aa3.31□□□□□ -1.88
USP53-205ENST00000509769 SLC45A1Q9Y2W3 748 aa3.31□□□□□ -1.88
USP53-205ENST00000509769 LOC102725191A0A1B0GVB3 256 aa3.3□□□□□ -1.88
USP53-205ENST00000509769 WTIPA6NIX2 430 aaPredicted RBP3.3□□□□□ -1.88
USP53-205ENST00000509769 F5H6K3 240 aa3.3□□□□□ -1.88
USP53-205ENST00000509769 PIRO00625 290 aa3.3□□□□□ -1.88
USP53-205ENST00000509769 SLC25A17O43808 307 aa3.3□□□□□ -1.88
USP53-205ENST00000509769 DLX3O60479 287 aa3.3□□□□□ -1.88
USP53-205ENST00000509769 ACTL6BO94805 426 aa3.3□□□□□ -1.88
USP53-205ENST00000509769 OR4F21O95013 312 aa3.3□□□□□ -1.88
USP53-205ENST00000509769 A1BGP04217 495 aa3.3□□□□□ -1.88
USP53-205ENST00000509769 GP1BAP07359 652 aa3.3□□□□□ -1.88
USP53-205ENST00000509769 CTSLP07711 333 aa3.3□□□□□ -1.88
USP53-205ENST00000509769 OR2T7P0C7T2 308 aa3.3□□□□□ -1.88
USP53-205ENST00000509769 PGA4P0DJD7 388 aa3.3□□□□□ -1.88
USP53-205ENST00000509769 PGA5P0DJD9 388 aa3.3□□□□□ -1.88
USP53-205ENST00000509769 DRD5P21918 477 aa3.3□□□□□ -1.88
USP53-205ENST00000509769 KLRC2P26717 231 aa3.3□□□□□ -1.88
USP53-205ENST00000509769 SSTR4P31391 388 aa3.3□□□□□ -1.88
USP53-205ENST00000509769 AHRP35869 848 aa3.3□□□□□ -1.88
USP53-205ENST00000509769 PTGFRP43088 359 aa3.3□□□□□ -1.88
USP53-205ENST00000509769 GPR3P46089 330 aa3.3□□□□□ -1.88
USP53-205ENST00000509769 DAP3P51398 398 aaKnown RBP3.3□□□□□ -1.88
USP53-205ENST00000509769 SLC35B1P78383 322 aa3.3□□□□□ -1.88
USP53-205ENST00000509769 HSPB3Q12988 150 aa3.3□□□□□ -1.88
USP53-205ENST00000509769 SSX1Q16384 188 aa3.3□□□□□ -1.88
USP53-205ENST00000509769 PRICKLE4Q2TBC4 344 aa3.3□□□□□ -1.88
USP53-205ENST00000509769 BSXQ3C1V8 233 aa3.3□□□□□ -1.88
USP53-205ENST00000509769 RNFT1Q5M7Z0 435 aa3.3□□□□□ -1.88
USP53-205ENST00000509769 SFRP5Q5T4F7 317 aa3.3□□□□□ -1.88
USP53-205ENST00000509769 KDM4DQ6B0I6 523 aa3.3□□□□□ -1.88
USP53-205ENST00000509769 RNF111Q6ZNA4 994 aa3.3□□□□□ -1.88
USP53-205ENST00000509769 RABEPKQ7Z6M1 372 aa3.3□□□□□ -1.88
USP53-205ENST00000509769 PTRH1Q86Y79 214 aaKnown RBP3.3□□□□□ -1.88
USP53-205ENST00000509769 PHYKPLQ8IUZ5 450 aa3.3□□□□□ -1.88
USP53-205ENST00000509769 DEFB106AQ8N104 65 aa3.3□□□□□ -1.88
USP53-205ENST00000509769 BHLHE23Q8NDY6 225 aa3.3□□□□□ -1.88
USP53-205ENST00000509769 OR2T10Q8NGZ9 312 aa3.3□□□□□ -1.88
USP53-205ENST00000509769 OR5AK3PQ8NH89 298 aa3.3□□□□□ -1.88
USP53-205ENST00000509769 P2RY11Q96G91 374 aa3.3□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms