RNA–Protein interactions for RNA: ENST00000509637.6

RAB40C-202, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 565 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-202ENST00000509637 SHOX2O60902 331 aaPredicted RBP13.47□□□□□ -0.25
RAB40C-202ENST00000509637 OR6A2O95222 327 aa13.47□□□□□ -0.25
RAB40C-202ENST00000509637 SCG5P05408 212 aa13.47□□□□□ -0.25
RAB40C-202ENST00000509637 ACADSP16219 412 aa13.47□□□□□ -0.25
RAB40C-202ENST00000509637 STX1BP61266 288 aa13.47□□□□□ -0.25
RAB40C-202ENST00000509637 UBA52P62987 128 aaKnown RBP13.47□□□□□ -0.25
RAB40C-202ENST00000509637 LCN2P80188 198 aa13.47□□□□□ -0.25
RAB40C-202ENST00000509637 PSG4Q00888 419 aa13.47□□□□□ -0.25
RAB40C-202ENST00000509637 KLF17Q5JT82 389 aaPredicted RBP13.47□□□□□ -0.25
RAB40C-202ENST00000509637 C10orf128Q5T292 105 aa13.47□□□□□ -0.25
RAB40C-202ENST00000509637 TMEM53Q6P2H8 277 aa13.47□□□□□ -0.25
RAB40C-202ENST00000509637 SLC25A47Q6Q0C1 308 aa13.47□□□□□ -0.25
RAB40C-202ENST00000509637 RFPL4BQ6ZWI9 263 aa13.47□□□□□ -0.25
RAB40C-202ENST00000509637 SNX32Q86XE0 403 aa13.47□□□□□ -0.25
RAB40C-202ENST00000509637 C11orf65Q8NCR3 313 aa13.47□□□□□ -0.25
RAB40C-202ENST00000509637 NOXO1Q8NFA2 376 aa13.47□□□□□ -0.25
RAB40C-202ENST00000509637 SLC25A40Q8TBP6 338 aa13.47□□□□□ -0.25
RAB40C-202ENST00000509637 LRRC58Q96CX6 371 aa13.47□□□□□ -0.25
RAB40C-202ENST00000509637 ZNF48Q96MX3 618 aaPredicted RBP13.47□□□□□ -0.25
RAB40C-202ENST00000509637 DUX5Q96PT3 197 aa13.47□□□□□ -0.25
RAB40C-202ENST00000509637 CGREF1Q99674 301 aa13.47□□□□□ -0.25
RAB40C-202ENST00000509637 POFUT1Q9H488 388 aa13.47□□□□□ -0.25
RAB40C-202ENST00000509637 KAT8Q9H7Z6 458 aaKnown RBP13.47□□□□□ -0.25
RAB40C-202ENST00000509637 SLCO1C1Q9NYB5 712 aa13.47□□□□□ -0.25
RAB40C-202ENST00000509637 ANGPT4Q9Y264 503 aa13.47□□□□□ -0.25
RAB40C-202ENST00000509637 PPIAL4AQ9Y536 164 aa13.47□□□□□ -0.25
RAB40C-202ENST00000509637 PCDHGB1Q9Y5G3 927 aa13.47□□□□□ -0.25
RAB40C-202ENST00000509637 TRRAPQ9Y4A5 3859 aa13.47□□□□□ -0.25
RAB40C-202ENST00000509637 SLC22A23A1A5C7 686 aa13.46□□□□□ -0.25
RAB40C-202ENST00000509637 EVPLLA8MZ36 301 aa13.46□□□□□ -0.25
RAB40C-202ENST00000509637 TRAPPC2LH3BP13 241 aa13.46□□□□□ -0.25
RAB40C-202ENST00000509637 TMPRSS2O15393 492 aa13.46□□□□□ -0.25
RAB40C-202ENST00000509637 TGDSO95455 350 aa13.46□□□□□ -0.25
RAB40C-202ENST00000509637 RAD52P43351 418 aa13.46□□□□□ -0.25
RAB40C-202ENST00000509637 ATP4BP51164 291 aa13.46□□□□□ -0.25
RAB40C-202ENST00000509637 ZNF81P51508 661 aa13.46□□□□□ -0.25
RAB40C-202ENST00000509637 SEC61A1P61619 476 aaKnown RBP13.46□□□□□ -0.25
RAB40C-202ENST00000509637 TBC1D28Q2M2D7 210 aa13.46□□□□□ -0.25
RAB40C-202ENST00000509637 PCGF3Q3KNV8 242 aa13.46□□□□□ -0.25
RAB40C-202ENST00000509637 CROCCP2Q86T23 111 aa13.46□□□□□ -0.25
RAB40C-202ENST00000509637 DPP10Q8N608 796 aa13.46□□□□□ -0.25
RAB40C-202ENST00000509637 DEFB108BQ8NET1 73 aa13.46□□□□□ -0.25
RAB40C-202ENST00000509637 TMEM255BQ8WV15 326 aa13.46□□□□□ -0.25
RAB40C-202ENST00000509637 GEMIN6Q8WXD5 167 aaKnown RBP13.46□□□□□ -0.25
RAB40C-202ENST00000509637 CCL17Q92583 94 aa13.46□□□□□ -0.25
RAB40C-202ENST00000509637 THOC1Q96FV9 657 aaKnown RBP13.46□□□□□ -0.25
RAB40C-202ENST00000509637 RBM4Q9BWF3 364 aaKnown RBP13.46□□□□□ -0.25
RAB40C-202ENST00000509637 OR2J1Q9GZK6 312 aa13.46□□□□□ -0.25
RAB40C-202ENST00000509637 WNT5BQ9H1J7 359 aa13.46□□□□□ -0.25
RAB40C-202ENST00000509637 C7orf69Q9H7B7 122 aa13.46□□□□□ -0.25
RAB40C-202ENST00000509637 NPHS2Q9NP85 383 aa13.46□□□□□ -0.25
RAB40C-202ENST00000509637 SLC13A4Q9UKG4 626 aa13.46□□□□□ -0.25
RAB40C-202ENST00000509637 PKD1L1Q8TDX9 2849 aa13.45□□□□□ -0.26
RAB40C-202ENST00000509637 FBP2O00757 339 aa13.45□□□□□ -0.26
RAB40C-202ENST00000509637 PIP5K1CO60331 668 aa13.45□□□□□ -0.26
RAB40C-202ENST00000509637 OR7A10O76100 309 aa13.45□□□□□ -0.26
RAB40C-202ENST00000509637 PRSS23O95084 383 aa13.45□□□□□ -0.26
RAB40C-202ENST00000509637 IGHG1P01857 330 aa13.45□□□□□ -0.26
RAB40C-202ENST00000509637 CCNOP22674 350 aa13.45□□□□□ -0.26
RAB40C-202ENST00000509637 STOMP27105 288 aa13.45□□□□□ -0.26
RAB40C-202ENST00000509637 LSP1P33241 339 aa13.45□□□□□ -0.26
RAB40C-202ENST00000509637 CLRN1P58418 232 aa13.45□□□□□ -0.26
RAB40C-202ENST00000509637 MRPS34P82930 218 aaKnown RBP13.45□□□□□ -0.26
RAB40C-202ENST00000509637 FHL1Q13642 323 aa13.45□□□□□ -0.26
RAB40C-202ENST00000509637 SLC36A2Q495M3 483 aa13.45□□□□□ -0.26
RAB40C-202ENST00000509637 NRN1LQ496H8 165 aa13.45□□□□□ -0.26
RAB40C-202ENST00000509637 BEND6Q5SZJ8 279 aaPredicted RBP13.45□□□□□ -0.26
RAB40C-202ENST00000509637 DCAF12L2Q5VW00 463 aa13.45□□□□□ -0.26
RAB40C-202ENST00000509637 DHDDSQ86SQ9 333 aa13.45□□□□□ -0.26
RAB40C-202ENST00000509637 SIGLECL1Q8N7X8 197 aa13.45□□□□□ -0.26
RAB40C-202ENST00000509637 SGMS2Q8NHU3 365 aa13.45□□□□□ -0.26
RAB40C-202ENST00000509637 KLF14Q8TD94 323 aaPredicted RBP13.45□□□□□ -0.26
RAB40C-202ENST00000509637 BCL2L14Q9BZR8 327 aa13.45□□□□□ -0.26
RAB40C-202ENST00000509637 EVA1AQ9H8M9 152 aa13.45□□□□□ -0.26
RAB40C-202ENST00000509637 NANOGQ9H9S0 305 aa13.45□□□□□ -0.26
RAB40C-202ENST00000509637 MSL2Q9HCI7 577 aa13.45□□□□□ -0.26
RAB40C-202ENST00000509637 ZNF69Q9UC07 566 aa13.45□□□□□ -0.26
RAB40C-202ENST00000509637 A0A0G2JMP0 313 aa13.44□□□□□ -0.26
RAB40C-202ENST00000509637 A0A0X1KG70 313 aa13.44□□□□□ -0.26
RAB40C-202ENST00000509637 CLDN25C9JDP6 229 aa13.44□□□□□ -0.26
RAB40C-202ENST00000509637 FARS2O95363 451 aaKnown RBP13.44□□□□□ -0.26
RAB40C-202ENST00000509637 MT-ND1P03886 318 aa13.44□□□□□ -0.26
RAB40C-202ENST00000509637 UMPSP11172 480 aa13.44□□□□□ -0.26
RAB40C-202ENST00000509637 ANPEPP15144 967 aa13.44□□□□□ -0.26
RAB40C-202ENST00000509637 PCGF2P35227 344 aa13.44□□□□□ -0.26
RAB40C-202ENST00000509637 ERVK-25P63136 954 aa13.44□□□□□ -0.26
RAB40C-202ENST00000509637 CYP51A1Q16850 503 aa13.44□□□□□ -0.26
RAB40C-202ENST00000509637 Q6ZR03 302 aa13.44□□□□□ -0.26
RAB40C-202ENST00000509637 NANOGNBQ7Z5D8 188 aa13.44□□□□□ -0.26
RAB40C-202ENST00000509637 LRRC75AQ8NAA5 344 aa13.44□□□□□ -0.26
RAB40C-202ENST00000509637 OR4M2Q8NGB6 313 aa13.44□□□□□ -0.26
RAB40C-202ENST00000509637 OR10A6Q8NH74 314 aa13.44□□□□□ -0.26
RAB40C-202ENST00000509637 NANPQ8TBE9 248 aa13.44□□□□□ -0.26
RAB40C-202ENST00000509637 SNX33Q8WV41 574 aa13.44□□□□□ -0.26
RAB40C-202ENST00000509637 NSMAFQ92636 917 aa13.44□□□□□ -0.26
RAB40C-202ENST00000509637 RAB39BQ96DA2 213 aa13.44□□□□□ -0.26
RAB40C-202ENST00000509637 MPP4Q96JB8 637 aa13.44□□□□□ -0.26
RAB40C-202ENST00000509637 SLC19A3Q9BZV2 496 aa13.44□□□□□ -0.26
RAB40C-202ENST00000509637 SAP30LQ9HAJ7 183 aa13.44□□□□□ -0.26
RAB40C-202ENST00000509637 SIAEQ9HAT2 523 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms