RNA–Protein interactions for RNA: ENST00000509206.1

RNF4-211, Transcript of ring finger protein 4, humanhuman

TSL 3

Gene RNF4, Length 490 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-211ENST00000509206 TECTBQ96PL2 329 aa3.18□□□□□ -1.9
RNF4-211ENST00000509206 ZNF382Q96SR6 550 aa3.18□□□□□ -1.9
RNF4-211ENST00000509206 CPNE1Q99829 537 aa3.18□□□□□ -1.9
RNF4-211ENST00000509206 MCRIP2Q9BUT9 160 aaKnown RBP3.18□□□□□ -1.9
RNF4-211ENST00000509206 NPFFR1Q9GZQ6 430 aa3.18□□□□□ -1.9
RNF4-211ENST00000509206 NELFAQ9H3P2 528 aa3.18□□□□□ -1.9
RNF4-211ENST00000509206 C1orf198Q9H425 327 aa3.18□□□□□ -1.9
RNF4-211ENST00000509206 PIGUQ9H490 435 aa3.18□□□□□ -1.9
RNF4-211ENST00000509206 NANSQ9NR45 359 aa3.18□□□□□ -1.9
RNF4-211ENST00000509206 DUSP22Q9NRW4 184 aa3.18□□□□□ -1.9
RNF4-211ENST00000509206 ZCCHC3Q9NUD5 404 aaKnown RBP3.18□□□□□ -1.9
RNF4-211ENST00000509206 B3GNT2Q9NY97 397 aa3.18□□□□□ -1.9
RNF4-211ENST00000509206 TAS2R7Q9NYW3 318 aa3.18□□□□□ -1.9
RNF4-211ENST00000509206 TAGLN3Q9UI15 199 aa3.18□□□□□ -1.9
RNF4-211ENST00000509206 NDRG4Q9ULP0 352 aaKnown RBP3.18□□□□□ -1.9
RNF4-211ENST00000509206 TMCO1Q9UM00 188 aa3.18□□□□□ -1.9
RNF4-211ENST00000509206 PPP1R3CQ9UQK1 317 aa3.18□□□□□ -1.9
RNF4-211ENST00000509206 RCE1Q9Y256 329 aa3.18□□□□□ -1.9
RNF4-211ENST00000509206 GIMAP1-GIMAP5A0A087WTJ2 511 aa3.17□□□□□ -1.9
RNF4-211ENST00000509206 TCRBV4S1A1TA0A5B7 111 aa3.17□□□□□ -1.9
RNF4-211ENST00000509206 LIPT2A6NK58 231 aa3.17□□□□□ -1.9
RNF4-211ENST00000509206 LRRC30A6NM36 301 aa3.17□□□□□ -1.9
RNF4-211ENST00000509206 ZNF726A6NNF4 738 aa3.17□□□□□ -1.9
RNF4-211ENST00000509206 F5H0A9 414 aaPredicted RBP3.17□□□□□ -1.9
RNF4-211ENST00000509206 MANBAO00462 879 aa3.17□□□□□ -1.9
RNF4-211ENST00000509206 FBP2O00757 339 aa3.17□□□□□ -1.9
RNF4-211ENST00000509206 TM9SF1O15321 606 aa3.17□□□□□ -1.9
RNF4-211ENST00000509206 TIMM8AO60220 97 aaPredicted RBP3.17□□□□□ -1.9
RNF4-211ENST00000509206 RAMP3O60896 148 aa3.17□□□□□ -1.9
RNF4-211ENST00000509206 STX11O75558 287 aa3.17□□□□□ -1.9
RNF4-211ENST00000509206 PIAS1O75925 651 aa3.17□□□□□ -1.9
RNF4-211ENST00000509206 OR4F21O95013 312 aa3.17□□□□□ -1.9
RNF4-211ENST00000509206 WISP3O95389 354 aaPredicted RBP3.17□□□□□ -1.9
RNF4-211ENST00000509206 HMGN2P05204 90 aaKnown RBP3.17□□□□□ -1.9
RNF4-211ENST00000509206 CCDC159P0C7I6 412 aa3.17□□□□□ -1.9
RNF4-211ENST00000509206 THRBP10828 461 aa3.17□□□□□ -1.9
RNF4-211ENST00000509206 IRF2P14316 349 aa3.17□□□□□ -1.9
RNF4-211ENST00000509206 B4GALT1P15291 398 aa3.17□□□□□ -1.9
RNF4-211ENST00000509206 CHN1P15882 459 aa3.17□□□□□ -1.9
RNF4-211ENST00000509206 ZNF26P17031 533 aaPredicted RBP3.17□□□□□ -1.9
RNF4-211ENST00000509206 PEX2P28328 305 aa3.17□□□□□ -1.9
RNF4-211ENST00000509206 TACR3P29371 465 aa3.17□□□□□ -1.9
RNF4-211ENST00000509206 ECHS1P30084 290 aa3.17□□□□□ -1.9
RNF4-211ENST00000509206 APLNRP35414 380 aa3.17□□□□□ -1.9
RNF4-211ENST00000509206 MAP3K8P41279 467 aa3.17□□□□□ -1.9
RNF4-211ENST00000509206 CDH13P55290 713 aa3.17□□□□□ -1.9
RNF4-211ENST00000509206 COPZ1P61923 177 aa3.17□□□□□ -1.9
RNF4-211ENST00000509206 ARF6P62330 175 aa3.17□□□□□ -1.9
RNF4-211ENST00000509206 RAE1P78406 368 aaKnown RBP3.17□□□□□ -1.9
RNF4-211ENST00000509206 DLG1Q12959 904 aa3.17□□□□□ -1.9
RNF4-211ENST00000509206 PDIA2Q13087 525 aaKnown RBP3.17□□□□□ -1.9
RNF4-211ENST00000509206 TRAF3Q13114 568 aa3.17□□□□□ -1.9
RNF4-211ENST00000509206 SKP2Q13309 424 aa3.17□□□□□ -1.9
RNF4-211ENST00000509206 TOP3AQ13472 1001 aaPredicted RBP3.17□□□□□ -1.9
RNF4-211ENST00000509206 FRG1Q14331 258 aaKnown RBP3.17□□□□□ -1.9
RNF4-211ENST00000509206 LY6EQ16553 131 aa3.17□□□□□ -1.9
RNF4-211ENST00000509206 GGTA1PQ4G0N0 100 aa3.17□□□□□ -1.9
RNF4-211ENST00000509206 RUNDC3AQ59EK9 446 aa3.17□□□□□ -1.9
RNF4-211ENST00000509206 KHDC1LQ5JSQ8 128 aa3.17□□□□□ -1.9
RNF4-211ENST00000509206 SPATA46Q5T0L3 261 aa3.17□□□□□ -1.9
RNF4-211ENST00000509206 THEM4Q5T1C6 240 aa3.17□□□□□ -1.9
RNF4-211ENST00000509206 GRTP1Q5TC63 336 aa3.17□□□□□ -1.9
RNF4-211ENST00000509206 RNF220Q5VTB9 566 aa3.17□□□□□ -1.9
RNF4-211ENST00000509206 FAM71E1Q6IPT2 247 aa3.17□□□□□ -1.9
RNF4-211ENST00000509206 NHLRC1Q6VVB1 395 aa3.17□□□□□ -1.9
RNF4-211ENST00000509206 C16orf62Q7Z3J2 963 aa3.17□□□□□ -1.9
RNF4-211ENST00000509206 CMC1Q7Z7K0 106 aa3.17□□□□□ -1.9
RNF4-211ENST00000509206 ZER1Q7Z7L7 766 aa3.17□□□□□ -1.9
RNF4-211ENST00000509206 SATL1Q86VE3 508 aa3.17□□□□□ -1.9
RNF4-211ENST00000509206 CALHM3Q86XJ0 350 aa3.17□□□□□ -1.9
RNF4-211ENST00000509206 EPHX4Q8IUS5 362 aa3.17□□□□□ -1.9
RNF4-211ENST00000509206 KLHL7Q8IXQ5 586 aa3.17□□□□□ -1.9
RNF4-211ENST00000509206 KDM8Q8N371 416 aa3.17□□□□□ -1.9
RNF4-211ENST00000509206 SCAIQ8N9R8 606 aa3.17□□□□□ -1.9
RNF4-211ENST00000509206 FBXO36Q8NEA4 188 aa3.17□□□□□ -1.9
RNF4-211ENST00000509206 OR2Z1Q8NG97 314 aa3.17□□□□□ -1.9
RNF4-211ENST00000509206 NPRL2Q8WTW4 380 aa3.17□□□□□ -1.9
RNF4-211ENST00000509206 GATAD1Q8WUU5 269 aa3.17□□□□□ -1.9
RNF4-211ENST00000509206 HOXB13Q92826 284 aaPredicted RBP3.17□□□□□ -1.9
RNF4-211ENST00000509206 CIDECQ96AQ7 238 aaPredicted RBP3.17□□□□□ -1.9
RNF4-211ENST00000509206 PPCDCQ96CD2 204 aa3.17□□□□□ -1.9
RNF4-211ENST00000509206 GIMAP5Q96F15 307 aa3.17□□□□□ -1.9
RNF4-211ENST00000509206 SAMD8Q96LT4 415 aa3.17□□□□□ -1.9
RNF4-211ENST00000509206 WDFY2Q96P53 400 aa3.17□□□□□ -1.9
RNF4-211ENST00000509206 OR5M11Q96RB7 305 aa3.17□□□□□ -1.9
RNF4-211ENST00000509206 GPR22Q99680 433 aa3.17□□□□□ -1.9
RNF4-211ENST00000509206 ARHGDIGQ99819 225 aa3.17□□□□□ -1.9
RNF4-211ENST00000509206 ARPC5LQ9BPX5 153 aa3.17□□□□□ -1.9
RNF4-211ENST00000509206 KRTAP9-2Q9BYQ4 174 aa3.17□□□□□ -1.9
RNF4-211ENST00000509206 KCNN2Q9H2S1 579 aa3.17□□□□□ -1.9
RNF4-211ENST00000509206 GCM1Q9NP62 436 aa3.17□□□□□ -1.9
RNF4-211ENST00000509206 A4GALTQ9NPC4 353 aa3.17□□□□□ -1.9
RNF4-211ENST00000509206 ST6GALNAC1Q9NSC7 600 aaPredicted RBP3.17□□□□□ -1.9
RNF4-211ENST00000509206 DCAF16Q9NXF7 216 aa3.17□□□□□ -1.9
RNF4-211ENST00000509206 ERVK-18Q9QC07 812 aa3.17□□□□□ -1.9
RNF4-211ENST00000509206 OSGIN1Q9UJX0 560 aa3.17□□□□□ -1.9
RNF4-211ENST00000509206 GUCA1BQ9UMX6 200 aa3.17□□□□□ -1.9
RNF4-211ENST00000509206 SLC35A3Q9Y2D2 325 aa3.17□□□□□ -1.9
RNF4-211ENST00000509206 POLR3HQ9Y535 204 aaPredicted RBP3.17□□□□□ -1.9
RNF4-211ENST00000509206 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP3.17□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms