RNA–Protein interactions for RNA: ENST00000509102.5

UBE3D-207, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 1 (best)

Gene UBE3D, Length 1,246 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-207ENST00000509102 HDAC2Q92769 488 aaKnown RBP16.09■□□□□ 0.17
UBE3D-207ENST00000509102 MCUR1Q96AQ8 359 aa16.09■□□□□ 0.17
UBE3D-207ENST00000509102 ZNF346Q9UL40 294 aaKnown RBP16.09■□□□□ 0.17
UBE3D-207ENST00000509102 A0A1W2PPW3 197 aa16.08■□□□□ 0.16
UBE3D-207ENST00000509102 GPRIN2O60269 458 aa16.08■□□□□ 0.16
UBE3D-207ENST00000509102 PRSS23O95084 383 aa16.08■□□□□ 0.16
UBE3D-207ENST00000509102 ADRA2AP08913 450 aa16.08■□□□□ 0.16
UBE3D-207ENST00000509102 DAOP14920 347 aa16.08■□□□□ 0.16
UBE3D-207ENST00000509102 TCN1P20061 433 aaPredicted RBP16.08■□□□□ 0.16
UBE3D-207ENST00000509102 RAD52P43351 418 aa16.08■□□□□ 0.16
UBE3D-207ENST00000509102 GPR4P46093 362 aa16.08■□□□□ 0.16
UBE3D-207ENST00000509102 GYS2P54840 703 aa16.08■□□□□ 0.16
UBE3D-207ENST00000509102 SMIM11AP58511 58 aa16.08■□□□□ 0.16
UBE3D-207ENST00000509102 LSM11P83369 360 aaKnown RBP eCLIP16.08■□□□□ 0.16
UBE3D-207ENST00000509102 VLDLRP98155 873 aa16.08■□□□□ 0.16
UBE3D-207ENST00000509102 FMODQ06828 376 aa16.08■□□□□ 0.16
UBE3D-207ENST00000509102 KRTAP1-1Q07627 177 aa16.08■□□□□ 0.16
UBE3D-207ENST00000509102 GGTLC2Q14390 218 aa16.08■□□□□ 0.16
UBE3D-207ENST00000509102 ZBED5Q49AG3 693 aa16.08■□□□□ 0.16
UBE3D-207ENST00000509102 IQCCQ4KMZ1 466 aa16.08■□□□□ 0.16
UBE3D-207ENST00000509102 RGS7BPQ6MZT1 257 aaPredicted RBP16.08■□□□□ 0.16
UBE3D-207ENST00000509102 IGFN1Q86VF2 1251 aa16.08■□□□□ 0.16
UBE3D-207ENST00000509102 ZNF584Q8IVC4 421 aa16.08■□□□□ 0.16
UBE3D-207ENST00000509102 FGFBP3Q8TAT2 258 aa16.08■□□□□ 0.16
UBE3D-207ENST00000509102 MRPL37Q9BZE1 423 aaKnown RBP16.08■□□□□ 0.16
UBE3D-207ENST00000509102 GORASP2Q9H8Y8 452 aa16.08■□□□□ 0.16
UBE3D-207ENST00000509102 NDUFAF4Q9P032 175 aa16.08■□□□□ 0.16
UBE3D-207ENST00000509102 REV1Q9UBZ9 1251 aa16.08■□□□□ 0.16
UBE3D-207ENST00000509102 DUSP13Q9UII6 198 aa16.08■□□□□ 0.16
UBE3D-207ENST00000509102 AURKCQ9UQB9 309 aa16.08■□□□□ 0.16
UBE3D-207ENST00000509102 A8MV72 311 aaPredicted RBP16.07■□□□□ 0.16
UBE3D-207ENST00000509102 SNAP29O95721 258 aa16.07■□□□□ 0.16
UBE3D-207ENST00000509102 HSD17B1P14061 328 aa16.07■□□□□ 0.16
UBE3D-207ENST00000509102 CDAP32320 146 aa16.07■□□□□ 0.16
UBE3D-207ENST00000509102 NR4A2P43354 598 aa16.07■□□□□ 0.16
UBE3D-207ENST00000509102 PCBD1P61457 104 aa16.07■□□□□ 0.16
UBE3D-207ENST00000509102 FXNQ16595 210 aa16.07■□□□□ 0.16
UBE3D-207ENST00000509102 TBPL2Q6SJ96 375 aa16.07■□□□□ 0.16
UBE3D-207ENST00000509102 MEX3DQ86XN8 651 aaKnown RBP16.07■□□□□ 0.16
UBE3D-207ENST00000509102 ALDH16A1Q8IZ83 802 aa16.07■□□□□ 0.16
UBE3D-207ENST00000509102 ARIH2OSQ8N7S6 290 aa16.07■□□□□ 0.16
UBE3D-207ENST00000509102 FAM156AQ8NDB6 213 aa16.07■□□□□ 0.16
UBE3D-207ENST00000509102 SLC7A13Q8TCU3 470 aa16.07■□□□□ 0.16
UBE3D-207ENST00000509102 NSMCE2Q96MF7 247 aa16.07■□□□□ 0.16
UBE3D-207ENST00000509102 TSPAN32Q96QS1 320 aa16.07■□□□□ 0.16
UBE3D-207ENST00000509102 SYT3Q9BQG1 590 aa16.07■□□□□ 0.16
UBE3D-207ENST00000509102 BCL2L14Q9BZR8 327 aa16.07■□□□□ 0.16
UBE3D-207ENST00000509102 CR1P17927 2039 aa16.07■□□□□ 0.16
UBE3D-207ENST00000509102 A0A1W2PPL8 197 aa16.06■□□□□ 0.16
UBE3D-207ENST00000509102 TMEM129A0AVI4 362 aa16.06■□□□□ 0.16
UBE3D-207ENST00000509102 AHCYL1O43865 530 aa16.06■□□□□ 0.16
UBE3D-207ENST00000509102 CRLF1O75462 422 aa16.06■□□□□ 0.16
UBE3D-207ENST00000509102 LCKP06239 509 aa16.06■□□□□ 0.16
UBE3D-207ENST00000509102 CD14P08571 375 aa16.06■□□□□ 0.16
UBE3D-207ENST00000509102 FAM157BP0CG42 384 aa16.06■□□□□ 0.16
UBE3D-207ENST00000509102 GZMKP49863 264 aa16.06■□□□□ 0.16
UBE3D-207ENST00000509102 ERVK-25P63136 954 aa16.06■□□□□ 0.16
UBE3D-207ENST00000509102 NKPD1Q17RQ9 610 aa16.06■□□□□ 0.16
UBE3D-207ENST00000509102 SPATS1Q496A3 300 aa16.06■□□□□ 0.16
UBE3D-207ENST00000509102 PABPC1L2AQ5JQF8 200 aa16.06■□□□□ 0.16
UBE3D-207ENST00000509102 CYB5R2Q6BCY4 276 aa16.06■□□□□ 0.16
UBE3D-207ENST00000509102 PODNL1Q6PEZ8 512 aa16.06■□□□□ 0.16
UBE3D-207ENST00000509102 SLC25A47Q6Q0C1 308 aa16.06■□□□□ 0.16
UBE3D-207ENST00000509102 PIGWQ7Z7B1 504 aa16.06■□□□□ 0.16
UBE3D-207ENST00000509102 LRRC75AQ8NAA5 344 aa16.06■□□□□ 0.16
UBE3D-207ENST00000509102 ZNF519Q8TB69 540 aa16.06■□□□□ 0.16
UBE3D-207ENST00000509102 SNX33Q8WV41 574 aa16.06■□□□□ 0.16
UBE3D-207ENST00000509102 C11orf40Q8WZ69 217 aa16.06■□□□□ 0.16
UBE3D-207ENST00000509102 NMD3Q96D46 503 aaKnown RBP16.06■□□□□ 0.16
UBE3D-207ENST00000509102 PYURFQ96I23 114 aa16.06■□□□□ 0.16
UBE3D-207ENST00000509102 FAM46AQ96IP4 442 aaKnown RBP16.06■□□□□ 0.16
UBE3D-207ENST00000509102 ZNF570Q96NI8 536 aa16.06■□□□□ 0.16
UBE3D-207ENST00000509102 FOXN4Q96NZ1 517 aa16.06■□□□□ 0.16
UBE3D-207ENST00000509102 CDRT15Q96T59 188 aa16.06■□□□□ 0.16
UBE3D-207ENST00000509102 EIF3KQ9UBQ5 218 aaKnown RBP16.06■□□□□ 0.16
UBE3D-207ENST00000509102 UGT2A1Q9Y4X1 527 aa16.06■□□□□ 0.16
UBE3D-207ENST00000509102 V9GYQ6 96 aa16.06■□□□□ 0.16
UBE3D-207ENST00000509102 ABCA2Q9BZC7 2435 aa16.06■□□□□ 0.16
UBE3D-207ENST00000509102 ABCA1O95477 2261 aa16.06■□□□□ 0.16
UBE3D-207ENST00000509102 A0A096LNT2 108 aa16.05■□□□□ 0.16
UBE3D-207ENST00000509102 CDC42EP2O14613 210 aa16.05■□□□□ 0.16
UBE3D-207ENST00000509102 NDUFB2O95178 105 aa16.05■□□□□ 0.16
UBE3D-207ENST00000509102 MT-ND5P03915 603 aa16.05■□□□□ 0.16
UBE3D-207ENST00000509102 APEHP13798 732 aaKnown RBP16.05■□□□□ 0.16
UBE3D-207ENST00000509102 FUT4P22083 530 aa16.05■□□□□ 0.16
UBE3D-207ENST00000509102 CCNOP22674 350 aa16.05■□□□□ 0.16
UBE3D-207ENST00000509102 STOMP27105 288 aa16.05■□□□□ 0.16
UBE3D-207ENST00000509102 KLF3P57682 345 aaPredicted RBP16.05■□□□□ 0.16
UBE3D-207ENST00000509102 MOGQ16653 247 aa16.05■□□□□ 0.16
UBE3D-207ENST00000509102 C6orf52Q5T4I8 152 aa16.05■□□□□ 0.16
UBE3D-207ENST00000509102 FAM27BQ5VT28 67 aa16.05■□□□□ 0.16
UBE3D-207ENST00000509102 ZCCHC24Q8N2G6 241 aaKnown RBP16.05■□□□□ 0.16
UBE3D-207ENST00000509102 ICA1LQ8NDH6 482 aa16.05■□□□□ 0.16
UBE3D-207ENST00000509102 UBASH3BQ8TF42 649 aa16.05■□□□□ 0.16
UBE3D-207ENST00000509102 TPK1Q9H3S4 243 aa16.05■□□□□ 0.16
UBE3D-207ENST00000509102 FZR1Q9UM11 496 aa16.05■□□□□ 0.16
UBE3D-207ENST00000509102 C12orf71A8MTZ7 269 aa16.04■□□□□ 0.16
UBE3D-207ENST00000509102 VWC2LB2RUY7 222 aa16.04■□□□□ 0.16
UBE3D-207ENST00000509102 CST2P09228 141 aa16.04■□□□□ 0.16
UBE3D-207ENST00000509102 MMP7P09237 267 aaPredicted RBP16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms